RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 COX7A2LO14548 114 aa6.25□□□□□ -1.41
CTNND1-220ENST00000529526 PROP1O75360 226 aa6.25□□□□□ -1.41
CTNND1-220ENST00000529526 UNQ9165/PRO28630Q6UXU0 137 aa6.25□□□□□ -1.41
CTNND1-220ENST00000529526 COL4A3Q01955 1670 aa6.25□□□□□ -1.41
CTNND1-220ENST00000529526 IGLL5B9A064 214 aa6.25□□□□□ -1.41
CTNND1-220ENST00000529526 MRPL23Q16540 153 aaKnown RBP6.25□□□□□ -1.41
CTNND1-220ENST00000529526 SND1-IT1Q9HBX3 110 aa6.25□□□□□ -1.41
CTNND1-220ENST00000529526 ADAMTS9Q9P2N4 1935 aa6.25□□□□□ -1.41
CTNND1-220ENST00000529526 KIR2DL5BA0A0G2JN68 375 aa6.25□□□□□ -1.41
CTNND1-220ENST00000529526 KIR2DL5BA0A0G2JPC4 375 aa6.25□□□□□ -1.41
CTNND1-220ENST00000529526 RBM3P98179 157 aaKnown RBP6.25□□□□□ -1.41
CTNND1-220ENST00000529526 C9orf47Q6ZRZ4 202 aa6.25□□□□□ -1.41
CTNND1-220ENST00000529526 KIR2DL5AQ8N109 375 aa6.25□□□□□ -1.41
CTNND1-220ENST00000529526 HHLA3Q9XRX5 114 aa6.24□□□□□ -1.41
CTNND1-220ENST00000529526 ETDCA0A1B0GVM5 59 aa6.24□□□□□ -1.41
CTNND1-220ENST00000529526 A4D1N5 150 aa6.24□□□□□ -1.41
CTNND1-220ENST00000529526 DEFB135Q30KP9 77 aa6.24□□□□□ -1.41
CTNND1-220ENST00000529526 LINC01545Q5VT33 79 aa6.24□□□□□ -1.41
CTNND1-220ENST00000529526 RNF152Q8N8N0 203 aa6.24□□□□□ -1.41
CTNND1-220ENST00000529526 IGLV1-47P01700 117 aa6.24□□□□□ -1.41
CTNND1-220ENST00000529526 TIRAPP58753 221 aa6.24□□□□□ -1.41
CTNND1-220ENST00000529526 C4orf3Q8WVX3 66 aa6.24□□□□□ -1.41
CTNND1-220ENST00000529526 SIRPDQ9H106 197 aa6.24□□□□□ -1.41
CTNND1-220ENST00000529526 GPR179Q6PRD1 2367 aa6.24□□□□□ -1.41
CTNND1-220ENST00000529526 DEFB125Q8N687 156 aa6.24□□□□□ -1.41
CTNND1-220ENST00000529526 TOMM6Q96B49 74 aa6.24□□□□□ -1.41
CTNND1-220ENST00000529526 MDFICQ9P1T7 246 aa6.24□□□□□ -1.41
CTNND1-220ENST00000529526 TRBV7-3A0A075B6L6 115 aa6.23□□□□□ -1.41
CTNND1-220ENST00000529526 FXYD2P54710 66 aa6.23□□□□□ -1.41
CTNND1-220ENST00000529526 ZNF503Q96F45 646 aa6.23□□□□□ -1.41
CTNND1-220ENST00000529526 CCL18P55774 89 aa6.23□□□□□ -1.41
CTNND1-220ENST00000529526 OPRPNQ99935 248 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-220ENST00000529526 SPRY4Q9C004 299 aa6.23□□□□□ -1.41
CTNND1-220ENST00000529526 C2orf16Q68DN1 1984 aa6.22□□□□□ -1.41
CTNND1-220ENST00000529526 Q8NA96 180 aa6.22□□□□□ -1.41
CTNND1-220ENST00000529526 WFDC11Q8NEX6 87 aa6.22□□□□□ -1.41
CTNND1-220ENST00000529526 WNK2Q9Y3S1 2297 aa6.22□□□□□ -1.41
CTNND1-220ENST00000529526 DAZAP2Q15038 168 aaPredicted RBP6.22□□□□□ -1.41
CTNND1-220ENST00000529526 LINC01548A6NM66 108 aa6.22□□□□□ -1.41
CTNND1-220ENST00000529526 IGKV3D-7A0A0C4DH55 119 aa6.21□□□□□ -1.41
CTNND1-220ENST00000529526 CEMP1Q6PRD7 247 aaPredicted RBP6.21□□□□□ -1.41
CTNND1-220ENST00000529526 TIMM17AQ99595 171 aa6.21□□□□□ -1.41
CTNND1-220ENST00000529526 IGHG2P01859 326 aa6.21□□□□□ -1.41
CTNND1-220ENST00000529526 TP53TG3Q9ULZ0 132 aa6.21□□□□□ -1.41
CTNND1-220ENST00000529526 TEX48A0A1B0GUV7 120 aa6.21□□□□□ -1.42
CTNND1-220ENST00000529526 COA6Q5JTJ3 125 aaKnown RBP6.21□□□□□ -1.42
CTNND1-220ENST00000529526 GPHB5Q86YW7 130 aa6.21□□□□□ -1.42
CTNND1-220ENST00000529526 CLEC2BQ92478 149 aa6.21□□□□□ -1.42
CTNND1-220ENST00000529526 CHKB-CPT1BH3BT56 60 aa6.21□□□□□ -1.42
CTNND1-220ENST00000529526 K7EMT4 169 aa6.21□□□□□ -1.42
CTNND1-220ENST00000529526 VSIG2Q96IQ7 327 aa6.21□□□□□ -1.42
CTNND1-220ENST00000529526 FANCD2OSQ96PS1 177 aa6.21□□□□□ -1.42
CTNND1-220ENST00000529526 DENND4AQ7Z401 1863 aa6.21□□□□□ -1.42
CTNND1-220ENST00000529526 P0DMU3 169 aa6.21□□□□□ -1.42
CTNND1-220ENST00000529526 FAM231AP0DMU4 169 aa6.21□□□□□ -1.42
CTNND1-220ENST00000529526 FAM231CP0DMU5 169 aa6.21□□□□□ -1.42
CTNND1-220ENST00000529526 CTRLP40313 264 aa6.21□□□□□ -1.42
CTNND1-220ENST00000529526 GTF3C1Q12789 2109 aa6.21□□□□□ -1.42
CTNND1-220ENST00000529526 DYSFO75923 2080 aa6.2□□□□□ -1.42
CTNND1-220ENST00000529526 IGKV1D-37A0A075B6S9 117 aa6.2□□□□□ -1.42
CTNND1-220ENST00000529526 A6NDX4 124 aa6.2□□□□□ -1.42
CTNND1-220ENST00000529526 C11orf86A6NJI1 115 aa6.2□□□□□ -1.42
CTNND1-220ENST00000529526 CCDC140Q96MF4 163 aa6.2□□□□□ -1.42
CTNND1-220ENST00000529526 DOPEY2Q9Y3R5 2298 aa6.2□□□□□ -1.42
CTNND1-220ENST00000529526 C19orf84I3L1E1 186 aa6.2□□□□□ -1.42
CTNND1-220ENST00000529526 CACNA1GO43497 2377 aa6.2□□□□□ -1.42
CTNND1-220ENST00000529526 DNAJC9-AS1A6NH13 148 aa6.2□□□□□ -1.42
CTNND1-220ENST00000529526 ZNF106Q9H2Y7 1883 aaKnown RBP6.2□□□□□ -1.42
CTNND1-220ENST00000529526 TMEM61Q8N0U2 210 aa6.2□□□□□ -1.42
CTNND1-220ENST00000529526 KLK12Q9UKR0 248 aa6.2□□□□□ -1.42
CTNND1-220ENST00000529526 OBSL1O75147 1896 aa6.2□□□□□ -1.42
CTNND1-220ENST00000529526 ZNF80P51504 273 aaPredicted RBP6.19□□□□□ -1.42
CTNND1-220ENST00000529526 C1orf229Q6ZS94 237 aaPredicted RBP6.19□□□□□ -1.42
CTNND1-220ENST00000529526 C11orf1Q9H5F2 150 aa6.19□□□□□ -1.42
CTNND1-220ENST00000529526 KIAA1549LQ6ZVL6 1849 aa6.19□□□□□ -1.42
CTNND1-220ENST00000529526 TNRC6BQ9UPQ9 1833 aaKnown RBP6.19□□□□□ -1.42
CTNND1-220ENST00000529526 ABCA4P78363 2273 aa6.19□□□□□ -1.42
CTNND1-220ENST00000529526 FUSP35637 526 aaKnown RBP eCLIP6.19□□□□□ -1.42
CTNND1-220ENST00000529526 MAP6D1Q9H9H5 199 aa6.19□□□□□ -1.42
CTNND1-220ENST00000529526 MALRD1Q5VYJ5 2156 aa6.19□□□□□ -1.42
CTNND1-220ENST00000529526 MYCNOSP40205 109 aa6.19□□□□□ -1.42
CTNND1-220ENST00000529526 LOXL1Q08397 574 aaPredicted RBP6.19□□□□□ -1.42
CTNND1-220ENST00000529526 WFDC9Q8NEX5 89 aa6.19□□□□□ -1.42
CTNND1-220ENST00000529526 MED13Q9UHV7 2174 aa6.19□□□□□ -1.42
CTNND1-220ENST00000529526 NDUFA1O15239 70 aa6.19□□□□□ -1.42
CTNND1-220ENST00000529526 WFDC2Q14508 124 aa6.19□□□□□ -1.42
CTNND1-220ENST00000529526 HIST2H2BDQ6DRA6 164 aa6.19□□□□□ -1.42
CTNND1-220ENST00000529526 A0A0J9YX75 114 aa6.19□□□□□ -1.42
CTNND1-220ENST00000529526 Q6ZPA2 131 aa6.19□□□□□ -1.42
CTNND1-220ENST00000529526 C19orf71A6NCJ1 209 aa6.18□□□□□ -1.42
CTNND1-220ENST00000529526 LINC00322Q6ZN03 302 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-220ENST00000529526 NFE4Q86UQ8 179 aa6.18□□□□□ -1.42
CTNND1-220ENST00000529526 ZGRF1Q86YA3 2104 aa6.18□□□□□ -1.42
CTNND1-220ENST00000529526 E9PLD3 99 aa6.18□□□□□ -1.42
CTNND1-220ENST00000529526 B5MCH6 92 aa6.18□□□□□ -1.42
CTNND1-220ENST00000529526 LGALS9O00182 355 aa6.18□□□□□ -1.42
CTNND1-220ENST00000529526 LECT2O14960 151 aa6.18□□□□□ -1.42
CTNND1-220ENST00000529526 MED14OSP0DP75 135 aa6.18□□□□□ -1.42
CTNND1-220ENST00000529526 UBE2AP49459 152 aa6.18□□□□□ -1.42
CTNND1-220ENST00000529526 ODF1Q14990 250 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms