RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 PIK3CD-AS1Q5SR53 167 aa17.56■□□□□ 0.4
LDLRAD3-203ENST00000528989 AMN1Q8IY45 258 aa17.56■□□□□ 0.4
LDLRAD3-203ENST00000528989 LINC00612Q8N6U2 182 aa17.56■□□□□ 0.4
LDLRAD3-203ENST00000528989 AP1S3Q96PC3 154 aa17.56■□□□□ 0.4
LDLRAD3-203ENST00000528989 A0A1B0GW15 77 aa17.55■□□□□ 0.4
LDLRAD3-203ENST00000528989 ZNF479Q96JC4 524 aa17.55■□□□□ 0.4
LDLRAD3-203ENST00000528989 TMEM191AQ9H0A3 160 aa17.55■□□□□ 0.4
LDLRAD3-203ENST00000528989 TRGC1P0CF51 173 aa17.54■□□□□ 0.4
LDLRAD3-203ENST00000528989 LINC00315P59091 139 aa17.54■□□□□ 0.4
LDLRAD3-203ENST00000528989 RASL11AQ6T310 242 aa17.54■□□□□ 0.4
LDLRAD3-203ENST00000528989 RAB5AP20339 215 aa17.54■□□□□ 0.4
LDLRAD3-203ENST00000528989 A8MWV9 139 aa17.53■□□□□ 0.4
LDLRAD3-203ENST00000528989 RS1O15537 224 aa17.53■□□□□ 0.4
LDLRAD3-203ENST00000528989 SLAQ13239 276 aa17.53■□□□□ 0.4
LDLRAD3-203ENST00000528989 OR4C5Q8NGB2 326 aa17.53■□□□□ 0.4
LDLRAD3-203ENST00000528989 NHLRC4P0CG21 123 aaPredicted RBP17.52■□□□□ 0.4
LDLRAD3-203ENST00000528989 RPS10P46783 165 aaKnown RBP17.52■□□□□ 0.4
LDLRAD3-203ENST00000528989 UFSP1Q6NVU6 142 aa17.52■□□□□ 0.4
LDLRAD3-203ENST00000528989 RNF185Q96GF1 192 aa17.52■□□□□ 0.4
LDLRAD3-203ENST00000528989 GNB1LQ9BYB4 327 aa17.52■□□□□ 0.4
LDLRAD3-203ENST00000528989 DAD1P61803 113 aa17.52■□□□□ 0.39
LDLRAD3-203ENST00000528989 SMIM15Q7Z3B0 74 aa17.52■□□□□ 0.39
LDLRAD3-203ENST00000528989 GATD1Q8NB37 220 aa17.52■□□□□ 0.39
LDLRAD3-203ENST00000528989 DPH3P1Q9H4G8 78 aa17.52■□□□□ 0.39
LDLRAD3-203ENST00000528989 STAB2Q8WWQ8 2551 aa17.51■□□□□ 0.39
LDLRAD3-203ENST00000528989 NACAE9PAV3 2078 aa17.51■□□□□ 0.39
LDLRAD3-203ENST00000528989 S100A8P05109 93 aa17.51■□□□□ 0.39
LDLRAD3-203ENST00000528989 SMIM17P0DL12 118 aa17.51■□□□□ 0.39
LDLRAD3-203ENST00000528989 C12orf74Q32Q52 190 aa17.51■□□□□ 0.39
LDLRAD3-203ENST00000528989 NDUFAF3Q9BU61 184 aa17.51■□□□□ 0.39
LDLRAD3-203ENST00000528989 TRAV26-2A0A0B4J265 109 aa17.5■□□□□ 0.39
LDLRAD3-203ENST00000528989 MGPP08493 103 aa17.5■□□□□ 0.39
LDLRAD3-203ENST00000528989 RAB4AP20338 218 aa17.5■□□□□ 0.39
LDLRAD3-203ENST00000528989 FAM104BQ5XKR9 115 aa17.5■□□□□ 0.39
LDLRAD3-203ENST00000528989 Q6ZSN1 163 aa17.5■□□□□ 0.39
LDLRAD3-203ENST00000528989 FRZBQ92765 325 aa17.5■□□□□ 0.39
LDLRAD3-203ENST00000528989 TRAV4A0A0B4J268 109 aa17.5■□□□□ 0.39
LDLRAD3-203ENST00000528989 GAS8-AS1O95177 125 aa17.5■□□□□ 0.39
LDLRAD3-203ENST00000528989 KIAA1644Q3SXP7 199 aa17.5■□□□□ 0.39
LDLRAD3-203ENST00000528989 TRAPPC1Q9Y5R8 145 aa17.5■□□□□ 0.39
LDLRAD3-203ENST00000528989 F5H697 171 aa17.48■□□□□ 0.39
LDLRAD3-203ENST00000528989 NANOS2P60321 138 aaKnown RBP17.48■□□□□ 0.39
LDLRAD3-203ENST00000528989 FABP9Q0Z7S8 132 aa17.48■□□□□ 0.39
LDLRAD3-203ENST00000528989 MRPL18Q9H0U6 180 aaKnown RBP17.48■□□□□ 0.39
LDLRAD3-203ENST00000528989 MRPL51Q4U2R6 128 aaKnown RBP17.48■□□□□ 0.39
LDLRAD3-203ENST00000528989 C11orf45Q8TAV5 145 aa17.48■□□□□ 0.39
LDLRAD3-203ENST00000528989 C18orf15Q96N68 181 aa17.48■□□□□ 0.39
LDLRAD3-203ENST00000528989 HLA-DQA1P01909 254 aa17.47■□□□□ 0.39
LDLRAD3-203ENST00000528989 APCSP02743 223 aa17.47■□□□□ 0.39
LDLRAD3-203ENST00000528989 TRGC2P03986 189 aa17.47■□□□□ 0.39
LDLRAD3-203ENST00000528989 ZNF56Q15929 161 aa17.47■□□□□ 0.39
LDLRAD3-203ENST00000528989 SMKR1H3BMG3 65 aa17.46■□□□□ 0.39
LDLRAD3-203ENST00000528989 GATA1P15976 413 aaPredicted RBP17.46■□□□□ 0.38
LDLRAD3-203ENST00000528989 HOXA5P20719 270 aa17.46■□□□□ 0.38
LDLRAD3-203ENST00000528989 COX19Q49B96 90 aa17.46■□□□□ 0.38
LDLRAD3-203ENST00000528989 Q6ZTC4 211 aa17.46■□□□□ 0.38
LDLRAD3-203ENST00000528989 Q9UF83 564 aa17.46■□□□□ 0.38
LDLRAD3-203ENST00000528989 NCR2O95944 276 aa17.44■□□□□ 0.38
LDLRAD3-203ENST00000528989 MT-ND6P03923 174 aa17.44■□□□□ 0.38
LDLRAD3-203ENST00000528989 FHL2Q14192 279 aa17.44■□□□□ 0.38
LDLRAD3-203ENST00000528989 ZFP2Q6ZN57 461 aa17.44■□□□□ 0.38
LDLRAD3-203ENST00000528989 U3KQK5 164 aa17.44■□□□□ 0.38
LDLRAD3-203ENST00000528989 TEX48A0A1B0GUV7 120 aa17.44■□□□□ 0.38
LDLRAD3-203ENST00000528989 HTN3P15516 51 aa17.44■□□□□ 0.38
LDLRAD3-203ENST00000528989 SUMO4Q6EEV6 95 aa17.44■□□□□ 0.38
LDLRAD3-203ENST00000528989 P0DMU3 169 aa17.43■□□□□ 0.38
LDLRAD3-203ENST00000528989 FAM231AP0DMU4 169 aa17.43■□□□□ 0.38
LDLRAD3-203ENST00000528989 FAM231CP0DMU5 169 aa17.43■□□□□ 0.38
LDLRAD3-203ENST00000528989 TRGV4A0A0C4DH28 118 aa17.42■□□□□ 0.38
LDLRAD3-203ENST00000528989 D6R8Y8 96 aa17.42■□□□□ 0.38
LDLRAD3-203ENST00000528989 RHODO00212 210 aa17.42■□□□□ 0.38
LDLRAD3-203ENST00000528989 EDA2RQ9HAV5 297 aa17.42■□□□□ 0.38
LDLRAD3-203ENST00000528989 ATP5G1P05496 136 aa17.41■□□□□ 0.38
LDLRAD3-203ENST00000528989 PHOX2AO14813 284 aa17.41■□□□□ 0.38
LDLRAD3-203ENST00000528989 SLC25A29Q8N8R3 303 aa17.41■□□□□ 0.38
LDLRAD3-203ENST00000528989 TGP01266 2768 aa17.41■□□□□ 0.38
LDLRAD3-203ENST00000528989 M0QY20 66 aa17.4■□□□□ 0.38
LDLRAD3-203ENST00000528989 CKS2P33552 79 aa17.4■□□□□ 0.38
LDLRAD3-203ENST00000528989 F5H768 121 aa17.39■□□□□ 0.37
LDLRAD3-203ENST00000528989 RPL39LQ96EH5 51 aaKnown RBP17.39■□□□□ 0.37
LDLRAD3-203ENST00000528989 HHLA3Q9XRX5 114 aa17.39■□□□□ 0.37
LDLRAD3-203ENST00000528989 ORMDL3Q8N138 153 aa17.37■□□□□ 0.37
LDLRAD3-203ENST00000528989 MRAP2Q96G30 205 aa17.37■□□□□ 0.37
LDLRAD3-203ENST00000528989 SRIP30626 198 aa17.36■□□□□ 0.37
LDLRAD3-203ENST00000528989 A0A0J9YY99 117 aa17.35■□□□□ 0.37
LDLRAD3-203ENST00000528989 LOC100131303A0A0U1RQF7 123 aa17.35■□□□□ 0.37
LDLRAD3-203ENST00000528989 CIDEAO60543 219 aa17.35■□□□□ 0.37
LDLRAD3-203ENST00000528989 NRACQ8N912 160 aa17.35■□□□□ 0.37
LDLRAD3-203ENST00000528989 ALKBH7Q9BT30 221 aaPredicted RBP17.35■□□□□ 0.37
LDLRAD3-203ENST00000528989 NPYP01303 97 aa17.35■□□□□ 0.37
LDLRAD3-203ENST00000528989 PRELID3AQ96N28 172 aa17.35■□□□□ 0.37
LDLRAD3-203ENST00000528989 CRYBA4P53673 196 aa17.34■□□□□ 0.37
LDLRAD3-203ENST00000528989 K7EQD1 137 aa17.33■□□□□ 0.37
LDLRAD3-203ENST00000528989 PRO0255Q9UI72 69 aa17.33■□□□□ 0.37
LDLRAD3-203ENST00000528989 TRAV26-1A0A087WT03 109 aa17.33■□□□□ 0.36
LDLRAD3-203ENST00000528989 DEFB131BA0A096LNP1 70 aa17.33■□□□□ 0.36
LDLRAD3-203ENST00000528989 TRBV6-4A0A1B0GX49 114 aa17.33■□□□□ 0.36
LDLRAD3-203ENST00000528989 TNFRSF6BO95407 300 aa17.33■□□□□ 0.36
LDLRAD3-203ENST00000528989 PPBPP02775 128 aa17.33■□□□□ 0.36
LDLRAD3-203ENST00000528989 VSIG2Q96IQ7 327 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms