RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 RNASE8Q8TDE3 154 aaKnown RBP5.95□□□□□ -1.46
SSBP3-212ENST00000528930 LINC00477Q96M19 166 aa5.95□□□□□ -1.46
SSBP3-212ENST00000528930 SMIM7Q9BQ49 75 aa5.95□□□□□ -1.46
SSBP3-212ENST00000528930 AAMDCQ9H7C9 122 aa5.95□□□□□ -1.46
SSBP3-212ENST00000528930 GNG13Q9P2W3 67 aa5.95□□□□□ -1.46
SSBP3-212ENST00000528930 MRPS16Q9Y3D3 137 aaKnown RBP5.95□□□□□ -1.46
SSBP3-212ENST00000528930 NACAE9PAV3 2078 aa5.95□□□□□ -1.46
SSBP3-212ENST00000528930 IGKV2-40A0A087WW87 121 aaPredicted RBP5.94□□□□□ -1.46
SSBP3-212ENST00000528930 TRAV12-3A0A0B4J271 114 aa5.94□□□□□ -1.46
SSBP3-212ENST00000528930 CTXND1A0A1B0GTU2 59 aa5.94□□□□□ -1.46
SSBP3-212ENST00000528930 J3KRW8 73 aa5.94□□□□□ -1.46
SSBP3-212ENST00000528930 PDE6DO43924 150 aa5.94□□□□□ -1.46
SSBP3-212ENST00000528930 ZNF324O75467 553 aaPredicted RBP5.94□□□□□ -1.46
SSBP3-212ENST00000528930 SCGB1D1O95968 90 aa5.94□□□□□ -1.46
SSBP3-212ENST00000528930 IGKV2D-40P01614 121 aaPredicted RBP5.94□□□□□ -1.46
SSBP3-212ENST00000528930 SLC25A5P05141 298 aaKnown RBP5.94□□□□□ -1.46
SSBP3-212ENST00000528930 HTN1P15515 57 aa5.94□□□□□ -1.46
SSBP3-212ENST00000528930 CRISP2P16562 243 aa5.94□□□□□ -1.46
SSBP3-212ENST00000528930 LEPP41159 167 aa5.94□□□□□ -1.46
SSBP3-212ENST00000528930 DAD1P61803 113 aa5.94□□□□□ -1.46
SSBP3-212ENST00000528930 ZNF493Q6ZR52 646 aa5.94□□□□□ -1.46
SSBP3-212ENST00000528930 LINC01551Q86U37 167 aa5.94□□□□□ -1.46
SSBP3-212ENST00000528930 LYPD1Q8N2G4 141 aa5.94□□□□□ -1.46
SSBP3-212ENST00000528930 C16orf74Q96GX8 76 aa5.94□□□□□ -1.46
SSBP3-212ENST00000528930 VGLL1Q99990 258 aa5.94□□□□□ -1.46
SSBP3-212ENST00000528930 ATG101Q9BSB4 218 aa5.94□□□□□ -1.46
SSBP3-212ENST00000528930 CHTOPQ9Y3Y2 248 aaKnown RBP5.94□□□□□ -1.46
SSBP3-212ENST00000528930 NPSP0C0P6 89 aa5.93□□□□□ -1.46
SSBP3-212ENST00000528930 HTN3P15516 51 aa5.93□□□□□ -1.46
SSBP3-212ENST00000528930 G0S2P27469 103 aa5.93□□□□□ -1.46
SSBP3-212ENST00000528930 TAS2R45P59539 299 aa5.93□□□□□ -1.46
SSBP3-212ENST00000528930 RBX1P62877 108 aa5.93□□□□□ -1.46
SSBP3-212ENST00000528930 UBE2L3P68036 154 aaKnown RBP5.93□□□□□ -1.46
SSBP3-212ENST00000528930 UBE2V1Q13404 147 aa5.93□□□□□ -1.46
SSBP3-212ENST00000528930 PRR9Q5T870 116 aa5.93□□□□□ -1.46
SSBP3-212ENST00000528930 ZFAND2AQ8N6M9 145 aa5.93□□□□□ -1.46
SSBP3-212ENST00000528930 POM121L12Q8N7R1 296 aa5.93□□□□□ -1.46
SSBP3-212ENST00000528930 OR10G9Q8NGN4 311 aa5.93□□□□□ -1.46
SSBP3-212ENST00000528930 OR10G7Q8NGN6 311 aa5.93□□□□□ -1.46
SSBP3-212ENST00000528930 TMEM263Q8WUH6 116 aaKnown RBP5.93□□□□□ -1.46
SSBP3-212ENST00000528930 Q9H3A6 140 aa5.93□□□□□ -1.46
SSBP3-212ENST00000528930 ZNF492Q9P255 531 aa5.93□□□□□ -1.46
SSBP3-212ENST00000528930 UQCR10Q9UDW1 63 aa5.93□□□□□ -1.46
SSBP3-212ENST00000528930 TIMM8BQ9Y5J9 83 aaPredicted RBP5.93□□□□□ -1.46
SSBP3-212ENST00000528930 TRAPPC1Q9Y5R8 145 aa5.93□□□□□ -1.46
SSBP3-212ENST00000528930 A0A1W2PPV4 95 aa5.92□□□□□ -1.46
SSBP3-212ENST00000528930 C7orf71A4D174 169 aa5.92□□□□□ -1.46
SSBP3-212ENST00000528930 RBAKDNA6NC62 111 aa5.92□□□□□ -1.46
SSBP3-212ENST00000528930 DIRC3C9JPN6 131 aa5.92□□□□□ -1.46
SSBP3-212ENST00000528930 HMGB3O15347 200 aaKnown RBP5.92□□□□□ -1.46
SSBP3-212ENST00000528930 MT-ND6P03923 174 aa5.92□□□□□ -1.46
SSBP3-212ENST00000528930 STAG3L2P0CL84 134 aa5.92□□□□□ -1.46
SSBP3-212ENST00000528930 STAG3L3P0CL85 134 aa5.92□□□□□ -1.46
SSBP3-212ENST00000528930 DEFB130BP0DP73 79 aa5.92□□□□□ -1.46
SSBP3-212ENST00000528930 DEFB130AP0DP74 79 aa5.92□□□□□ -1.46
SSBP3-212ENST00000528930 ZNF726P1Q15940 193 aa5.92□□□□□ -1.46
SSBP3-212ENST00000528930 TMEM78Q5T7P6 136 aa5.92□□□□□ -1.46
SSBP3-212ENST00000528930 PQLC2Q6ZP29 291 aa5.92□□□□□ -1.46
SSBP3-212ENST00000528930 Q6ZQT7 251 aa5.92□□□□□ -1.46
SSBP3-212ENST00000528930 SSX7Q7RTT5 188 aa5.92□□□□□ -1.46
SSBP3-212ENST00000528930 LINC00612Q8N6U2 182 aa5.92□□□□□ -1.46
SSBP3-212ENST00000528930 CMTM2Q8TAZ6 248 aa5.92□□□□□ -1.46
SSBP3-212ENST00000528930 LINC00467Q9BRT7 94 aa5.92□□□□□ -1.46
SSBP3-212ENST00000528930 NOP10Q9NPE3 64 aaKnown RBP5.92□□□□□ -1.46
SSBP3-212ENST00000528930 TRBV7-9A0A0J9YWB2 115 aa5.91□□□□□ -1.46
SSBP3-212ENST00000528930 PGPA6NDG6 321 aa5.91□□□□□ -1.46
SSBP3-212ENST00000528930 CBY3A6NI87 242 aa5.91□□□□□ -1.46
SSBP3-212ENST00000528930 GPX1P07203 203 aa5.91□□□□□ -1.46
SSBP3-212ENST00000528930 RNASE4P34096 147 aaKnown RBP5.91□□□□□ -1.46
SSBP3-212ENST00000528930 CTRLP40313 264 aa5.91□□□□□ -1.46
SSBP3-212ENST00000528930 CSN1S1P47710 185 aa5.91□□□□□ -1.46
SSBP3-212ENST00000528930 CDC34P49427 236 aaPredicted RBP5.91□□□□□ -1.46
SSBP3-212ENST00000528930 ZNF138P52744 262 aa5.91□□□□□ -1.46
SSBP3-212ENST00000528930 UBE2G2P60604 165 aa5.91□□□□□ -1.46
SSBP3-212ENST00000528930 ADIRFQ15847 76 aa5.91□□□□□ -1.46
SSBP3-212ENST00000528930 OR10J3Q5JRS4 329 aa5.91□□□□□ -1.46
SSBP3-212ENST00000528930 SMIM15Q7Z3B0 74 aa5.91□□□□□ -1.46
SSBP3-212ENST00000528930 C11orf72Q8NBR9 251 aa5.91□□□□□ -1.46
SSBP3-212ENST00000528930 Q8TAT8 98 aa5.91□□□□□ -1.46
SSBP3-212ENST00000528930 VAMP8Q9BV40 100 aa5.91□□□□□ -1.46
SSBP3-212ENST00000528930 PARLQ9H300 379 aa5.91□□□□□ -1.46
SSBP3-212ENST00000528930 OTORQ9NRC9 128 aa5.91□□□□□ -1.46
SSBP3-212ENST00000528930 ARL2-SNX15V9GYD0 113 aa5.91□□□□□ -1.46
SSBP3-212ENST00000528930 LRP2P98164 4655 aa5.9□□□□□ -1.46
SSBP3-212ENST00000528930 ATP5G1P05496 136 aa5.9□□□□□ -1.46
SSBP3-212ENST00000528930 ARL14EPLP0DKL9 152 aa5.9□□□□□ -1.46
SSBP3-212ENST00000528930 P0DMU3 169 aa5.9□□□□□ -1.46
SSBP3-212ENST00000528930 FAM231AP0DMU4 169 aa5.9□□□□□ -1.46
SSBP3-212ENST00000528930 FAM231CP0DMU5 169 aa5.9□□□□□ -1.46
SSBP3-212ENST00000528930 ATP5G3P48201 142 aa5.9□□□□□ -1.46
SSBP3-212ENST00000528930 CEBPGP53567 150 aa5.9□□□□□ -1.46
SSBP3-212ENST00000528930 DAZ2Q13117 558 aaKnown RBP5.9□□□□□ -1.46
SSBP3-212ENST00000528930 OR5I1Q13606 314 aa5.9□□□□□ -1.46
SSBP3-212ENST00000528930 PMCHL1Q16048 86 aa5.9□□□□□ -1.46
SSBP3-212ENST00000528930 ANXA2RQ3ZCQ2 193 aa5.9□□□□□ -1.46
SSBP3-212ENST00000528930 WDR73Q6P4I2 378 aa5.9□□□□□ -1.46
SSBP3-212ENST00000528930 GNB1LQ9BYB4 327 aa5.9□□□□□ -1.46
SSBP3-212ENST00000528930 FAT4Q6V0I7 4981 aa5.89□□□□□ -1.47
SSBP3-212ENST00000528930 SNURFLB1AK76 121 aa5.89□□□□□ -1.47
SSBP3-212ENST00000528930 F5H768 121 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms