RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 VCX2Q9H322 139 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 FBXL15Q9H469 300 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 KLK9Q9UKQ9 250 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 CELSR1Q9NYQ6 3014 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 PLXNB1O43157 2135 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 ADGRG4Q8IZF6 3080 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 MGAQ8IWI9 3026 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 IGLV11-55A0A075B6I3 123 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 TRBV7-1A0A0A6YYK4 115 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 D6R8Y8 96 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 K7EIM0 57 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 TAX1BP3O14907 124 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 ORM1P02763 201 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 ARMS2P0C7Q2 107 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 SCGB1A1P11684 91 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 EVI2AP22794 236 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 HES1Q14469 280 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 ORMDL2Q53FV1 153 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 SPRNQ5BIV9 151 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 C10orf55Q5SWW7 151 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 FAM120AOSQ5T036 256 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 TMEM78Q5T7P6 136 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 GDF5OSQ5U4N7 250 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 DUX4L9Q6RFH8 374 aaPredicted RBP3.64□□□□□ -1.83
CD44-230ENST00000528922 UNQ5815/PRO19632Q6UWF5 114 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 LYZL1Q6UWQ5 148 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 ATOH7Q8N100 152 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 MTURNQ8N3F0 131 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 LINC00612Q8N6U2 182 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 OR2K2Q8NGT1 345 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 MRAP2Q96G30 205 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 ZC2HC1AQ96GY0 325 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 CST9LQ9H4G1 147 aa3.64□□□□□ -1.83
CD44-230ENST00000528922 FBN1P35555 2871 aaKnown RBP3.64□□□□□ -1.83
CD44-230ENST00000528922 BOD1L1Q8NFC6 3051 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 PDZD2O15018 2839 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 ABCA1O95477 2261 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 NCBP2LA6PVI3 153 aaKnown RBP3.63□□□□□ -1.83
CD44-230ENST00000528922 E7EQL1 145 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 F8W1H4 67 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 LINC01619G3V211 115 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 MRPS12O15235 138 aaKnown RBP3.63□□□□□ -1.83
CD44-230ENST00000528922 DPM2O94777 84 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 IGKCP01834 107 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 IGLC6P0CF74 106 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 SRSF6Q13247 344 aaKnown RBP3.63□□□□□ -1.83
CD44-230ENST00000528922 LYPD2Q6UXB3 125 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 EXOC3-AS1Q8N2X6 119 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 Q8N8P6 123 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 OR8A1Q8NGG7 326 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 TYMSOSQ8TAI1 123 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 EEF1AKMT3Q96AZ1 226 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 METTL26Q96S19 204 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 SIGLEC8Q9NYZ4 499 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 ONECUT1Q9UBC0 465 aa3.63□□□□□ -1.83
CD44-230ENST00000528922 FN1P02751 2386 aaKnown RBP3.63□□□□□ -1.83
CD44-230ENST00000528922 MTORP42345 2549 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 IGHV3-72A0A0B4J1Y9 119 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 TRAV12-1A0A0B4J245 112 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 MUC21A0A0G2JKD1 596 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 A0A0G2JLM5 398 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 MUC21A0A140T8X8 626 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 FAM223BA6NKX1 122 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 ODF3BA8MYP8 253 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.62□□□□□ -1.83
CD44-230ENST00000528922 H3BUA1 57 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 K7EP34 96 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 SH2D1AO60880 128 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 BRI3O95415 125 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 COX7A1P24310 79 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 IFI27P40305 119 aaPredicted RBP3.62□□□□□ -1.83
CD44-230ENST00000528922 RBX1P62877 108 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 HERV-K104P63124 156 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 LAGE3Q14657 143 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 MRPL51Q4U2R6 128 aaKnown RBP3.62□□□□□ -1.83
CD44-230ENST00000528922 KLF17Q5JT82 389 aaPredicted RBP3.62□□□□□ -1.83
CD44-230ENST00000528922 AMMECR1LQ6DCA0 310 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 LINC00322Q6ZN03 302 aaPredicted RBP3.62□□□□□ -1.83
CD44-230ENST00000528922 Q6ZR54 194 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 FAM223AQ8IWN6 122 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 LINC00477Q96M19 166 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 C20orf78Q9BR46 151 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 TPPP3Q9BW30 176 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 MRPL36Q9P0J6 103 aaKnown RBP3.62□□□□□ -1.83
CD44-230ENST00000528922 CSMD1Q96PZ7 3565 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 CRYBG3Q68DQ2 2970 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 CENPEQ02224 2701 aa3.62□□□□□ -1.83
CD44-230ENST00000528922 ANKHD1Q8IWZ3 2542 aaKnown RBP3.61□□□□□ -1.83
CD44-230ENST00000528922 TRAV8-1A0A0A6YYK1 113 aa3.61□□□□□ -1.83
CD44-230ENST00000528922 H0Y8G0 127 aa3.61□□□□□ -1.83
CD44-230ENST00000528922 M0R381 172 aa3.61□□□□□ -1.83
CD44-230ENST00000528922 OVOL1O14753 267 aa3.61□□□□□ -1.83
CD44-230ENST00000528922 FCN3O75636 299 aa3.61□□□□□ -1.83
CD44-230ENST00000528922 IGHV3-48P01763 117 aa3.61□□□□□ -1.83
CD44-230ENST00000528922 UBE2E1P51965 193 aa3.61□□□□□ -1.83
CD44-230ENST00000528922 ZNF138P52744 262 aa3.61□□□□□ -1.83
CD44-230ENST00000528922 TCTAP57738 103 aa3.61□□□□□ -1.83
CD44-230ENST00000528922 HERVK_113P61574 105 aa3.61□□□□□ -1.83
CD44-230ENST00000528922 DIAPH2-AS1Q14236 149 aa3.61□□□□□ -1.83
CD44-230ENST00000528922 LDLRAD2Q5SZI1 272 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms