RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CDC42EP2O14613 210 aa3.43□□□□□ -1.86
PCF11-202ENST00000528336 SLC25A20O43772 301 aa3.43□□□□□ -1.86
PCF11-202ENST00000528336 HRASP01112 189 aa3.43□□□□□ -1.86
PCF11-202ENST00000528336 CD14P08571 375 aa3.43□□□□□ -1.86
PCF11-202ENST00000528336 HIST1H1BP16401 226 aaKnown RBP3.43□□□□□ -1.86
PCF11-202ENST00000528336 HIST1H1DP16402 221 aaKnown RBP3.43□□□□□ -1.86
PCF11-202ENST00000528336 HLA-DMBP28068 263 aa3.43□□□□□ -1.86
PCF11-202ENST00000528336 AKR1C1Q04828 323 aa3.43□□□□□ -1.86
PCF11-202ENST00000528336 KISS1Q15726 138 aa3.43□□□□□ -1.86
PCF11-202ENST00000528336 HSD17B12Q53GQ0 312 aa3.43□□□□□ -1.86
PCF11-202ENST00000528336 NCMAPQ5T1S8 102 aa3.43□□□□□ -1.86
PCF11-202ENST00000528336 OR5D14Q8NGL3 314 aa3.43□□□□□ -1.86
PCF11-202ENST00000528336 BAHCC1Q9P281 2608 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 INTS1Q8N201 2190 aaKnown RBP3.42□□□□□ -1.86
PCF11-202ENST00000528336 KIAA1549Q9HCM3 1950 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 H3BMM0 161 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 RPL36A-HNRNPH2H7BZ11 118 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 HIST1H2BKO60814 126 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 IGHV1-69P01742 117 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 IGHV3-7P01780 117 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 TCRAP04437 139 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 HIST1H2BJP06899 126 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 SLC25A16P16260 332 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 FXYD6P3P58550 94 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 TMEM155Q4W5P6 130 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 MEIG1Q5JSS6 88 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 Q5W150 140 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 ZNF322Q6U7Q0 402 aaPredicted RBP3.42□□□□□ -1.86
PCF11-202ENST00000528336 LCN15Q6UWW0 184 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 MIR17HGQ75NE6 70 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 TEN1Q86WV5 123 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 MED12LQ86YW9 2145 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 HIST3H2BBQ8N257 126 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 LINC00311Q8N616 119 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 C3orf56Q8N813 242 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 SMCR5Q8TEV8 140 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 UBE2WQ96B02 151 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 SNHG12Q9BXW3 62 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 TTTY13Q9BZ97 58 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 ASH1LQ9NR48 2969 aaKnown RBP3.42□□□□□ -1.86
PCF11-202ENST00000528336 OSTCQ9NRP0 149 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 OR5V1Q9UGF6 321 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 IER3IP1Q9Y5U9 82 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 UNC79Q9P2D8 2635 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 DOPEY2Q9Y3R5 2298 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 CENPEQ02224 2701 aa3.42□□□□□ -1.86
PCF11-202ENST00000528336 ICE1Q9Y2F5 2266 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 MPDZO75970 2070 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 TRGV10A0A0A0MS01 117 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 GRIFINA4D1Z8 144 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 A6NED7 52 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 A8MWP6 167 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 C3orf84H3BNL1 204 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 UQCRQO14949 82 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 HLA-DRB4P13762 266 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 COX6B1P14854 86 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 EIF4EBP1Q13541 118 aaPredicted RBP3.41□□□□□ -1.86
PCF11-202ENST00000528336 C10orf128Q5T292 105 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 RNF182Q8N6D2 247 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 DEDD2Q8WXF8 326 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 DPH3Q96FX2 82 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 Q96M85 177 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 HIST1H2BLQ99880 126 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 RERGLQ9H628 205 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 HLA-DRB4X5D2U9 266 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 CACNA1CQ13936 2221 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 UTP20O75691 2785 aaKnown RBP3.41□□□□□ -1.86
PCF11-202ENST00000528336 ALPK2Q86TB3 2170 aa3.41□□□□□ -1.86
PCF11-202ENST00000528336 C19orf71A6NCJ1 209 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 A8MUU9 505 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 CCDC179H3BU77 68 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 LY6HO94772 140 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 NPYP01303 97 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 SLC25A5P05141 298 aaKnown RBP3.4□□□□□ -1.87
PCF11-202ENST00000528336 HSD52Q0P140 79 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 HES1Q14469 280 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 DEFB116Q30KQ4 102 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 TMEM91Q6ZNR0 172 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 SDIM1Q6ZPB5 146 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 ZNF767PQ75MW2 155 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 MUC7Q8TAX7 377 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 DIRC1Q969H9 104 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 MUCL1Q96DR8 90 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 NPCDR1Q9BY65 106 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 SMDT1Q9H4I9 107 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 CMC2Q9NRP2 79 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 RPRMQ9NS64 109 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 EPDR1Q9UM22 224 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 PKDREJQ9NTG1 2253 aa3.4□□□□□ -1.87
PCF11-202ENST00000528336 ABCA12Q86UK0 2595 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 IGKV1OR2-108A0A075B7D4 117 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 DEFB108AA8MXU0 73 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 K7ERJ3 54 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 UBL3O95164 117 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 ZNF93P35789 620 aaPredicted RBP3.39□□□□□ -1.87
PCF11-202ENST00000528336 MPV17P39210 176 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 MIAQ16674 131 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 FAM27BQ5VT28 67 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 C12orf73Q69YU5 71 aa3.39□□□□□ -1.87
PCF11-202ENST00000528336 ZNF660Q6AZW8 331 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms