RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-212ENST00000527805 COX6CP09669 75 aa11.21□□□□□ -0.61
ATM-212ENST00000527805 TRBV6-1A0A0K0K1D8 114 aa11.2□□□□□ -0.62
ATM-212ENST00000527805 GATA1P15976 413 aaPredicted RBP11.2□□□□□ -0.62
ATM-212ENST00000527805 RHOHQ15669 191 aa11.2□□□□□ -0.62
ATM-212ENST00000527805 ZNF815PA8K554 130 aa11.2□□□□□ -0.62
ATM-212ENST00000527805 SPART-AS1P0CW21 52 aa11.2□□□□□ -0.62
ATM-212ENST00000527805 TMEM243Q9BU79 118 aa11.2□□□□□ -0.62
ATM-212ENST00000527805 HELZ2Q9BYK8 2649 aaKnown RBP11.2□□□□□ -0.62
ATM-212ENST00000527805 IGLL1P15814 213 aa11.2□□□□□ -0.62
ATM-212ENST00000527805 C20orf173Q96LM9 149 aa11.2□□□□□ -0.62
ATM-212ENST00000527805 DEFB4AO15263 64 aa11.19□□□□□ -0.62
ATM-212ENST00000527805 ZNF80P51504 273 aaPredicted RBP11.19□□□□□ -0.62
ATM-212ENST00000527805 GAGE6Q13070 117 aa11.19□□□□□ -0.62
ATM-212ENST00000527805 C20orf78Q9BR46 151 aa11.19□□□□□ -0.62
ATM-212ENST00000527805 H3BMM0 161 aa11.19□□□□□ -0.62
ATM-212ENST00000527805 ZC2HC1BQ5TFG8 222 aa11.19□□□□□ -0.62
ATM-212ENST00000527805 PLNP26678 52 aa11.19□□□□□ -0.62
ATM-212ENST00000527805 COL6A3P12111 3177 aa11.18□□□□□ -0.62
ATM-212ENST00000527805 C11orf68Q9H3H3 251 aaKnown RBP11.18□□□□□ -0.62
ATM-212ENST00000527805 MDFICQ9P1T7 246 aa11.18□□□□□ -0.62
ATM-212ENST00000527805 DSPP15924 2871 aaKnown RBP11.18□□□□□ -0.62
ATM-212ENST00000527805 hDV102S1A0JD36 115 aa11.18□□□□□ -0.62
ATM-212ENST00000527805 ZNF124Q15973 351 aa11.18□□□□□ -0.62
ATM-212ENST00000527805 C19orf71A6NCJ1 209 aa11.17□□□□□ -0.62
ATM-212ENST00000527805 K7ERU9 68 aa11.17□□□□□ -0.62
ATM-212ENST00000527805 SS18Q15532 418 aa11.17□□□□□ -0.62
ATM-212ENST00000527805 TRBV7-9A0A0J9YWB2 115 aa11.17□□□□□ -0.62
ATM-212ENST00000527805 LINC00322Q6ZN03 302 aaPredicted RBP11.17□□□□□ -0.62
ATM-212ENST00000527805 NDUFA7O95182 113 aa11.17□□□□□ -0.62
ATM-212ENST00000527805 CKS1BP61024 79 aa11.17□□□□□ -0.62
ATM-212ENST00000527805 PYY3Q5JQD4 70 aa11.17□□□□□ -0.62
ATM-212ENST00000527805 ATP5G1P05496 136 aa11.16□□□□□ -0.62
ATM-212ENST00000527805 ESM1Q9NQ30 184 aa11.16□□□□□ -0.62
ATM-212ENST00000527805 TNRC18O15417 2968 aaPredicted RBP11.16□□□□□ -0.62
ATM-212ENST00000527805 APOMO95445 188 aa11.16□□□□□ -0.62
ATM-212ENST00000527805 CRIP2P52943 208 aaPredicted RBP11.16□□□□□ -0.62
ATM-212ENST00000527805 C20orf144Q9BQM9 153 aa11.16□□□□□ -0.62
ATM-212ENST00000527805 IGHV1-24A0A0C4DH33 117 aa11.16□□□□□ -0.62
ATM-212ENST00000527805 PSCAO43653 123 aa11.16□□□□□ -0.62
ATM-212ENST00000527805 IGLV2-8P01709 118 aa11.16□□□□□ -0.62
ATM-212ENST00000527805 RPL39LQ96EH5 51 aaKnown RBP11.16□□□□□ -0.62
ATM-212ENST00000527805 C6orf226Q5I0X4 101 aa11.15□□□□□ -0.62
ATM-212ENST00000527805 SUMO4Q6EEV6 95 aa11.15□□□□□ -0.62
ATM-212ENST00000527805 AKAP13Q12802 2813 aa11.15□□□□□ -0.62
ATM-212ENST00000527805 TRAV8-2A0A0B4J237 113 aa11.15□□□□□ -0.62
ATM-212ENST00000527805 RASL10AQ92737 203 aa11.15□□□□□ -0.62
ATM-212ENST00000527805 MLST8Q9BVC4 326 aa11.15□□□□□ -0.63
ATM-212ENST00000527805 FABP2P12104 132 aa11.14□□□□□ -0.63
ATM-212ENST00000527805 TMEM141Q96I45 108 aa11.14□□□□□ -0.63
ATM-212ENST00000527805 TRAV2A0A0B4J234 112 aa11.14□□□□□ -0.63
ATM-212ENST00000527805 PLEKHB2Q96CS7 222 aa11.14□□□□□ -0.63
ATM-212ENST00000527805 CFAP46Q8IYW2 2715 aa11.14□□□□□ -0.63
ATM-212ENST00000527805 GAGE10A6NGK3 116 aa11.14□□□□□ -0.63
ATM-212ENST00000527805 CTRLP40313 264 aa11.14□□□□□ -0.63
ATM-212ENST00000527805 MAJINQ3KP22 176 aa11.14□□□□□ -0.63
ATM-212ENST00000527805 LINC00158P58513 81 aa11.14□□□□□ -0.63
ATM-212ENST00000527805 PMVKQ15126 192 aa11.14□□□□□ -0.63
ATM-212ENST00000527805 GDF5OSQ5U4N7 250 aa11.14□□□□□ -0.63
ATM-212ENST00000527805 USP24Q9UPU5 2620 aa11.13□□□□□ -0.63
ATM-212ENST00000527805 SMIM13P0DJ93 91 aa11.13□□□□□ -0.63
ATM-212ENST00000527805 LINC00482Q8N8I6 264 aa11.13□□□□□ -0.63
ATM-212ENST00000527805 CHAC1Q9BUX1 264 aa11.13□□□□□ -0.63
ATM-212ENST00000527805 GYPEP15421 78 aa11.13□□□□□ -0.63
ATM-212ENST00000527805 FRMD6-AS1P0C7T7 363 aa11.13□□□□□ -0.63
ATM-212ENST00000527805 TMEM263Q8WUH6 116 aaKnown RBP11.13□□□□□ -0.63
ATM-212ENST00000527805 TEX48A0A1B0GUV7 120 aa11.12□□□□□ -0.63
ATM-212ENST00000527805 MED14OSP0DP75 135 aa11.12□□□□□ -0.63
ATM-212ENST00000527805 STPG4Q8N801 248 aa11.12□□□□□ -0.63
ATM-212ENST00000527805 ODF3Q96PU9 254 aa11.12□□□□□ -0.63
ATM-212ENST00000527805 TIMM21Q9BVV7 248 aa11.12□□□□□ -0.63
ATM-212ENST00000527805 JPT2Q9H910 190 aa11.12□□□□□ -0.63
ATM-212ENST00000527805 KIR3DS1Q14943 382 aa11.12□□□□□ -0.63
ATM-212ENST00000527805 TP53TG3Q9ULZ0 132 aa11.11□□□□□ -0.63
ATM-212ENST00000527805 ANGP03950 147 aaKnown RBP11.11□□□□□ -0.63
ATM-212ENST00000527805 MRGPRG-AS1Q2M3A8 158 aa11.11□□□□□ -0.63
ATM-212ENST00000527805 RNASE13Q5GAN3 156 aaKnown RBP11.11□□□□□ -0.63
ATM-212ENST00000527805 MRPS16Q9Y3D3 137 aaKnown RBP11.11□□□□□ -0.63
ATM-212ENST00000527805 VPS13AQ96RL7 3174 aa11.1□□□□□ -0.63
ATM-212ENST00000527805 ZFAND2AQ8N6M9 145 aa11.1□□□□□ -0.63
ATM-212ENST00000527805 F8W735 103 aaPredicted RBP11.1□□□□□ -0.63
ATM-212ENST00000527805 K7EQD1 137 aa11.1□□□□□ -0.63
ATM-212ENST00000527805 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.1□□□□□ -0.63
ATM-212ENST00000527805 IGKV2-29A2NJV5 120 aaPredicted RBP11.1□□□□□ -0.63
ATM-212ENST00000527805 MRPL23Q16540 153 aaKnown RBP11.1□□□□□ -0.63
ATM-212ENST00000527805 Q6ZWC4 215 aa11.1□□□□□ -0.63
ATM-212ENST00000527805 EDN2P20800 178 aa11.09□□□□□ -0.63
ATM-212ENST00000527805 PRIMA1Q86XR5 153 aa11.09□□□□□ -0.63
ATM-212ENST00000527805 ATP6V0E2Q8NHE4 81 aa11.09□□□□□ -0.63
ATM-212ENST00000527805 NHP2Q9NX24 153 aaKnown RBP11.09□□□□□ -0.63
ATM-212ENST00000527805 WFDC10AQ9H1F0 79 aa11.09□□□□□ -0.63
ATM-212ENST00000527805 MRPL35Q9NZE8 188 aaKnown RBP11.09□□□□□ -0.63
ATM-212ENST00000527805 ZNF580Q9UK33 172 aa11.09□□□□□ -0.63
ATM-212ENST00000527805 HHLA3Q9XRX5 114 aa11.09□□□□□ -0.63
ATM-212ENST00000527805 CLPSL2Q6UWE3 100 aa11.08□□□□□ -0.64
ATM-212ENST00000527805 NDUFAF3Q9BU61 184 aa11.08□□□□□ -0.64
ATM-212ENST00000527805 DNAJC30Q96LL9 226 aa11.08□□□□□ -0.64
ATM-212ENST00000527805 DCANP1Q8TF63 244 aa11.08□□□□□ -0.64
ATM-212ENST00000527805 CFAP54Q96N23 3096 aa11.08□□□□□ -0.64
ATM-212ENST00000527805 CRIP1P50238 77 aa11.07□□□□□ -0.64
ATM-212ENST00000527805 Q6ZQT7 251 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms