RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 C6orf223Q8N319 242 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 TMEM75Q8N9X5 138 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 ZNF524Q96C55 264 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 UBE2D4Q9Y2X8 147 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 IGLV2-18A0A075B6J9 118 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 IGKV1D-43A0A0B4J1Z2 117 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 C8orf87E5RJ46 101 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 K7EMT4 169 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 WNT9BO14905 357 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 NXPH4O95158 308 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 NDUFA3O95167 84 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 RBM3P98179 157 aaKnown RBP2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 PLGLAQ15195 96 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 Q1RN00 199 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 ZNF542PQ5EBM4 170 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 UNQ9165/PRO28630Q6UXU0 137 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 C16orf47Q6ZP98 133 aaPredicted RBP2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 Q86TA4 180 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 DYNAPQ8N1N2 210 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 C20orf197Q8N268 126 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 FAM216BQ8N7L0 139 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 FXYD5Q96DB9 178 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 Q9H3A6 140 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 LINC00474Q9P2X8 69 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 ICOSQ9Y6W8 199 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 MED12Q93074 2177 aa2.71□□□□□ -1.98
CLNS1A-209ENST00000527299 PRRC2AP48634 2157 aaKnown RBP2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 INTS1Q8N201 2190 aaKnown RBP2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 MUC22E2RYF6 1773 aaPredicted RBP2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 IGHV3OR16-10A0A075B7F0 116 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 IGLV3-32A0A0A0MS00 114 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 IGHV1OR15-9A0A0B4J2B8 117 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 A0A0J9YX75 114 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 TRBV10-3A0A0K0K1G6 114 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 TMEM30CPA0ZSE6 113 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 SMKR1H3BMG3 65 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 M0R378 163 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 COX7A2P2O60397 106 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 FXYD7P58549 80 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 LAGE3Q14657 143 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 ESPL1Q14674 2120 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 S100A7L2Q5SY68 101 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 HIST2H2BDQ6DRA6 164 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 Q6ZSV7 163 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 SMIM29Q86T20 159 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 Q8IYB0 196 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 UBALD1Q8TB05 177 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 EEF1AKMT3Q96AZ1 226 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 C11orf68Q9H3H3 251 aaKnown RBP2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 LINC00588Q9Y4M8 146 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 NACAE9PAV3 2078 aa2.7□□□□□ -1.98
CLNS1A-209ENST00000527299 USF3Q68DE3 2245 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 EP400Q96L91 3159 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 IGHV1OR21-1A0A087WYE8 117 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 SDHAF1A6NFY7 115 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 E7EUB6 86 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 UBE2L6O14933 153 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 Q1T7F1 81 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 ESRGQ1W209 222 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 ZNF826PQ6ZT77 177 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 Q6ZVQ6 151 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 PHF5AQ7RTV0 110 aaKnown RBP2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 VN1R4Q7Z5H5 301 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 VMO1Q7Z5L0 202 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 ZNF491Q8N8L2 437 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 SPTSSAQ969W0 71 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 RNF185Q96GF1 192 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 AMELXQ99217 191 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 CNFNQ9BYD5 112 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 UNC13CQ8NB66 2214 aa2.69□□□□□ -1.98
CLNS1A-209ENST00000527299 DIDO1Q9BTC0 2240 aaKnown RBP2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 C11orf86A6NJI1 115 aa2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 C17orf98A8MV24 154 aa2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 ZNF73O43830 326 aaPredicted RBP2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 FSTL3O95633 263 aa2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 STATHP02808 62 aa2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 BRWD1-AS2P59051 145 aa2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 UBE2BP63146 152 aa2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 IGLV3-21P80748 117 aaPredicted RBP2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 CIRBPQ14011 172 aaKnown RBP2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 ECSCRQ19T08 205 aa2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 C10orf113Q5VZT2 155 aa2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 FAM53AQ6NSI3 398 aaPredicted RBP2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 LYZL1Q6UWQ5 148 aa2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 LCA10Q71F78 164 aa2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 COX8CQ7Z4L0 72 aa2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 TOMM6Q96B49 74 aa2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 KNTC1P50748 2209 aa2.68□□□□□ -1.98
CLNS1A-209ENST00000527299 CEP350Q5VT06 3117 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 TRAV8-3A0A0A6YYJ7 113 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 IGKV3D-20A0A0C4DH25 116 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 IGKV3D-7A0A0C4DH55 119 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 IGIPA6NJ69 53 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 E7EQL1 145 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 F8WEM9 126 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 H7C2G1 150 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 I3L3M4 83 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 TMEM256-PLSCR3K7ERE1 68 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms