RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 XGP55808 180 aa6.98□□□□□ -1.29
PRPF40B-204ENST00000527253 CCL20P78556 96 aa6.98□□□□□ -1.29
PRPF40B-204ENST00000527253 TMUB2Q71RG4 321 aa6.98□□□□□ -1.29
PRPF40B-204ENST00000527253 SFRP2Q96HF1 295 aa6.98□□□□□ -1.29
PRPF40B-204ENST00000527253 TCEAL7Q9BRU2 100 aa6.98□□□□□ -1.29
PRPF40B-204ENST00000527253 A0A087WWL8 130 aa6.97□□□□□ -1.29
PRPF40B-204ENST00000527253 KANTRA0A1W2PQU2 76 aa6.97□□□□□ -1.29
PRPF40B-204ENST00000527253 UMAD1C9J7I0 102 aa6.97□□□□□ -1.29
PRPF40B-204ENST00000527253 CDPF1Q6NVV7 123 aa6.97□□□□□ -1.29
PRPF40B-204ENST00000527253 MLST8Q9BVC4 326 aa6.97□□□□□ -1.29
PRPF40B-204ENST00000527253 Q9HAA7 133 aa6.97□□□□□ -1.29
PRPF40B-204ENST00000527253 M0R381 172 aa6.96□□□□□ -1.3
PRPF40B-204ENST00000527253 H2AFB1P0C5Y9 115 aa6.96□□□□□ -1.3
PRPF40B-204ENST00000527253 RPL19P84098 196 aaKnown RBP6.96□□□□□ -1.3
PRPF40B-204ENST00000527253 FAM74A4Q5TZK3 123 aa6.96□□□□□ -1.3
PRPF40B-204ENST00000527253 SYT8Q8NBV8 401 aa6.96□□□□□ -1.3
PRPF40B-204ENST00000527253 TPT1P13693 172 aaKnown RBP6.95□□□□□ -1.3
PRPF40B-204ENST00000527253 WFDC2Q14508 124 aa6.95□□□□□ -1.3
PRPF40B-204ENST00000527253 BAGE2Q86Y30 109 aa6.95□□□□□ -1.3
PRPF40B-204ENST00000527253 PHLDA3Q9Y5J5 127 aa6.95□□□□□ -1.3
PRPF40B-204ENST00000527253 MUC21A0A0G2JKD1 596 aa6.94□□□□□ -1.3
PRPF40B-204ENST00000527253 MUC21A0A140T8X8 626 aa6.94□□□□□ -1.3
PRPF40B-204ENST00000527253 RHODO00212 210 aa6.94□□□□□ -1.3
PRPF40B-204ENST00000527253 S100A9P06702 114 aaKnown RBP6.94□□□□□ -1.3
PRPF40B-204ENST00000527253 DAZ4Q86SG3 579 aaKnown RBP6.94□□□□□ -1.3
PRPF40B-204ENST00000527253 ZFP82Q8N141 532 aa6.94□□□□□ -1.3
PRPF40B-204ENST00000527253 OR10AG1Q8NH19 301 aa6.94□□□□□ -1.3
PRPF40B-204ENST00000527253 DERL1Q9BUN8 251 aa6.94□□□□□ -1.3
PRPF40B-204ENST00000527253 DAZ3Q9NR90 486 aaKnown RBP6.94□□□□□ -1.3
PRPF40B-204ENST00000527253 FAT1Q14517 4588 aa6.94□□□□□ -1.3
PRPF40B-204ENST00000527253 TRAV1-1A0A0B4J248 108 aa6.93□□□□□ -1.3
PRPF40B-204ENST00000527253 PSCAO43653 123 aa6.93□□□□□ -1.3
PRPF40B-204ENST00000527253 PFDN1O60925 122 aa6.93□□□□□ -1.3
PRPF40B-204ENST00000527253 GCSHP23434 173 aa6.93□□□□□ -1.3
PRPF40B-204ENST00000527253 EIF5AP63241 154 aaKnown RBP6.93□□□□□ -1.3
PRPF40B-204ENST00000527253 Q8N814 137 aa6.93□□□□□ -1.3
PRPF40B-204ENST00000527253 C11orf52Q96A22 123 aa6.93□□□□□ -1.3
PRPF40B-204ENST00000527253 DNAJC30Q96LL9 226 aa6.93□□□□□ -1.3
PRPF40B-204ENST00000527253 SSBP4Q9BWG4 385 aaPredicted RBP6.93□□□□□ -1.3
PRPF40B-204ENST00000527253 A0A087WWC5 75 aa6.92□□□□□ -1.3
PRPF40B-204ENST00000527253 SNAI2O43623 268 aa6.92□□□□□ -1.3
PRPF40B-204ENST00000527253 IGLV2-8P01709 118 aa6.92□□□□□ -1.3
PRPF40B-204ENST00000527253 CXCL1P09341 107 aa6.92□□□□□ -1.3
PRPF40B-204ENST00000527253 RPL35P42766 123 aaKnown RBP6.92□□□□□ -1.3
PRPF40B-204ENST00000527253 UBE2D3P61077 147 aa6.92□□□□□ -1.3
PRPF40B-204ENST00000527253 UBE2D2P62837 147 aa6.92□□□□□ -1.3
PRPF40B-204ENST00000527253 LAGE3Q14657 143 aa6.92□□□□□ -1.3
PRPF40B-204ENST00000527253 NIT1Q86X76 327 aa6.92□□□□□ -1.3
PRPF40B-204ENST00000527253 GNG13Q9P2W3 67 aa6.92□□□□□ -1.3
PRPF40B-204ENST00000527253 IGLV5-52A0A0A0MRZ9 124 aa6.91□□□□□ -1.3
PRPF40B-204ENST00000527253 RAB19A4D1S5 217 aa6.91□□□□□ -1.3
PRPF40B-204ENST00000527253 HAMPP81172 84 aa6.91□□□□□ -1.3
PRPF40B-204ENST00000527253 PRR27Q6MZM9 219 aa6.91□□□□□ -1.3
PRPF40B-204ENST00000527253 TCTE3Q8IZS6 198 aa6.91□□□□□ -1.3
PRPF40B-204ENST00000527253 OR10G8Q8NGN5 311 aa6.91□□□□□ -1.3
PRPF40B-204ENST00000527253 KIF25-AS1Q9Y6Z4 181 aa6.91□□□□□ -1.3
PRPF40B-204ENST00000527253 TRBV7-3A0A075B6L6 115 aa6.9□□□□□ -1.3
PRPF40B-204ENST00000527253 TRBV10-1A0A0K0K1A3 114 aa6.9□□□□□ -1.3
PRPF40B-204ENST00000527253 EPM2AB3EWF7 344 aa6.9□□□□□ -1.3
PRPF40B-204ENST00000527253 LECT2O14960 151 aa6.9□□□□□ -1.3
PRPF40B-204ENST00000527253 OR5AL1P0C617 328 aa6.9□□□□□ -1.3
PRPF40B-204ENST00000527253 GZMBP10144 247 aa6.9□□□□□ -1.3
PRPF40B-204ENST00000527253 SULT1A2P50226 295 aa6.9□□□□□ -1.3
PRPF40B-204ENST00000527253 RAB4BP61018 213 aa6.9□□□□□ -1.3
PRPF40B-204ENST00000527253 SSTP61278 116 aa6.9□□□□□ -1.3
PRPF40B-204ENST00000527253 CENPWQ5EE01 88 aa6.9□□□□□ -1.3
PRPF40B-204ENST00000527253 NEXN-AS1Q8NBZ9 246 aa6.9□□□□□ -1.3
PRPF40B-204ENST00000527253 NTN5Q8WTR8 489 aaPredicted RBP6.9□□□□□ -1.3
PRPF40B-204ENST00000527253 MANBALQ9NQG1 85 aa6.9□□□□□ -1.3
PRPF40B-204ENST00000527253 FAM30AQ9NZY2 134 aa6.9□□□□□ -1.3
PRPF40B-204ENST00000527253 TRAV8-3A0A0A6YYJ7 113 aa6.89□□□□□ -1.31
PRPF40B-204ENST00000527253 C19orf71A6NCJ1 209 aa6.89□□□□□ -1.31
PRPF40B-204ENST00000527253 RBFOX3A6NFN3 312 aa6.89□□□□□ -1.31
PRPF40B-204ENST00000527253 SMR3BP02814 79 aaPredicted RBP6.89□□□□□ -1.31
PRPF40B-204ENST00000527253 RAB5CP51148 216 aa6.89□□□□□ -1.31
PRPF40B-204ENST00000527253 RPL36AP83881 106 aaKnown RBP6.89□□□□□ -1.31
PRPF40B-204ENST00000527253 Q6ZNX1 250 aa6.89□□□□□ -1.31
PRPF40B-204ENST00000527253 BAALCQ8WXS3 180 aa6.89□□□□□ -1.31
PRPF40B-204ENST00000527253 RPL36ALQ969Q0 106 aaKnown RBP6.89□□□□□ -1.31
PRPF40B-204ENST00000527253 TM2D2Q9BX73 214 aa6.89□□□□□ -1.31
PRPF40B-204ENST00000527253 KLK12Q9UKR0 248 aa6.89□□□□□ -1.31
PRPF40B-204ENST00000527253 TRBV20OR9-2A0A075B6H5 130 aa6.88□□□□□ -1.31
PRPF40B-204ENST00000527253 IGLC6P0CF74 106 aa6.88□□□□□ -1.31
PRPF40B-204ENST00000527253 ZNF56Q15929 161 aa6.88□□□□□ -1.31
PRPF40B-204ENST00000527253 SPANXN1Q5VSR9 72 aa6.88□□□□□ -1.31
PRPF40B-204ENST00000527253 DNAH8Q96JB1 4490 aa6.88□□□□□ -1.31
PRPF40B-204ENST00000527253 FLG2Q5D862 2391 aaPredicted RBP6.88□□□□□ -1.31
PRPF40B-204ENST00000527253 TRBV6-8A0A0A6YYG3 113 aa6.87□□□□□ -1.31
PRPF40B-204ENST00000527253 C1QBP02746 253 aa6.87□□□□□ -1.31
PRPF40B-204ENST00000527253 MEF2BQ02080 365 aaPredicted RBP6.87□□□□□ -1.31
PRPF40B-204ENST00000527253 TOR2AQ5JU69 321 aa6.87□□□□□ -1.31
PRPF40B-204ENST00000527253 Q5VSD8 79 aa6.87□□□□□ -1.31
PRPF40B-204ENST00000527253 EIF5AL1Q6IS14 154 aaKnown RBP6.87□□□□□ -1.31
PRPF40B-204ENST00000527253 NTM-AS1Q6ZSK4 140 aa6.87□□□□□ -1.31
PRPF40B-204ENST00000527253 F5H697 171 aa6.86□□□□□ -1.31
PRPF40B-204ENST00000527253 BCL2P10415 239 aa6.86□□□□□ -1.31
PRPF40B-204ENST00000527253 ATRAIDQ6UW56 229 aa6.86□□□□□ -1.31
PRPF40B-204ENST00000527253 ENHOQ6UWT2 76 aa6.86□□□□□ -1.31
PRPF40B-204ENST00000527253 SLC51BQ86UW2 128 aa6.86□□□□□ -1.31
PRPF40B-204ENST00000527253 C9orf62Q8N4C0 152 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms