RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 HLA-DRB4P13762 266 aa12.02□□□□□ -0.48
SNRNP35-204ENST00000527158 FCER1GP30273 86 aa12.02□□□□□ -0.48
SNRNP35-204ENST00000527158 HLA-DRB4X5D2U9 266 aa12.02□□□□□ -0.48
SNRNP35-204ENST00000527158 TRAV12-2A0A075B6T6 113 aa12.02□□□□□ -0.49
SNRNP35-204ENST00000527158 MAP6D1Q9H9H5 199 aa12.02□□□□□ -0.49
SNRNP35-204ENST00000527158 H3BMM0 161 aa12.01□□□□□ -0.49
SNRNP35-204ENST00000527158 ANKRD39Q53RE8 183 aa12.01□□□□□ -0.49
SNRNP35-204ENST00000527158 AMTNQ6UX39 209 aa12.01□□□□□ -0.49
SNRNP35-204ENST00000527158 ZNF256Q9Y2P7 627 aaPredicted RBP12.01□□□□□ -0.49
SNRNP35-204ENST00000527158 PRSS47A8MTI9 375 aa12.01□□□□□ -0.49
SNRNP35-204ENST00000527158 ADARB2-AS1A8MUL3 147 aa12.01□□□□□ -0.49
SNRNP35-204ENST00000527158 EVI2AP22794 236 aa12.01□□□□□ -0.49
SNRNP35-204ENST00000527158 NDUFA11Q86Y39 141 aa12.01□□□□□ -0.49
SNRNP35-204ENST00000527158 TP73-AS1Q9UF72 201 aa12.01□□□□□ -0.49
SNRNP35-204ENST00000527158 H3BRM9 83 aa12□□□□□ -0.49
SNRNP35-204ENST00000527158 M0R381 172 aa12□□□□□ -0.49
SNRNP35-204ENST00000527158 ATP5LO75964 103 aa12□□□□□ -0.49
SNRNP35-204ENST00000527158 TNFRSF6BO95407 300 aa12□□□□□ -0.49
SNRNP35-204ENST00000527158 SAP30O75446 220 aa11.99□□□□□ -0.49
SNRNP35-204ENST00000527158 CD7P09564 240 aa11.99□□□□□ -0.49
SNRNP35-204ENST00000527158 RNASE3P12724 160 aaKnown RBP11.99□□□□□ -0.49
SNRNP35-204ENST00000527158 Q8N8P6 123 aa11.99□□□□□ -0.49
SNRNP35-204ENST00000527158 AP1S3Q96PC3 154 aa11.99□□□□□ -0.49
SNRNP35-204ENST00000527158 CBY3A6NI87 242 aa11.99□□□□□ -0.49
SNRNP35-204ENST00000527158 A8MTW9 85 aa11.99□□□□□ -0.49
SNRNP35-204ENST00000527158 SMKR1H3BMG3 65 aa11.98□□□□□ -0.49
SNRNP35-204ENST00000527158 AMMECR1LQ6DCA0 310 aa11.98□□□□□ -0.49
SNRNP35-204ENST00000527158 GTF2H5Q6ZYL4 71 aa11.98□□□□□ -0.49
SNRNP35-204ENST00000527158 RNASE8Q8TDE3 154 aaKnown RBP11.98□□□□□ -0.49
SNRNP35-204ENST00000527158 ZMAT4Q9H898 229 aa11.98□□□□□ -0.49
SNRNP35-204ENST00000527158 IGHV1OR15-1A0A075B7D0 117 aa11.97□□□□□ -0.49
SNRNP35-204ENST00000527158 FXYD7P58549 80 aa11.97□□□□□ -0.49
SNRNP35-204ENST00000527158 KRTAP10-3P60369 221 aa11.97□□□□□ -0.49
SNRNP35-204ENST00000527158 RBX1P62877 108 aa11.97□□□□□ -0.49
SNRNP35-204ENST00000527158 HIGD1BQ9P298 99 aa11.96□□□□□ -0.49
SNRNP35-204ENST00000527158 C9orf118A6NHY6 69 aa11.96□□□□□ -0.5
SNRNP35-204ENST00000527158 SPRY2O43597 315 aa11.96□□□□□ -0.5
SNRNP35-204ENST00000527158 CMC4P56277 68 aaPredicted RBP11.96□□□□□ -0.5
SNRNP35-204ENST00000527158 OR2K2Q8NGT1 345 aa11.96□□□□□ -0.5
SNRNP35-204ENST00000527158 OR11H12B2RN74 326 aa11.95□□□□□ -0.5
SNRNP35-204ENST00000527158 PF4P02776 101 aa11.95□□□□□ -0.5
SNRNP35-204ENST00000527158 ODF1Q14990 250 aa11.95□□□□□ -0.5
SNRNP35-204ENST00000527158 ODF3L2Q3SX64 289 aa11.95□□□□□ -0.5
SNRNP35-204ENST00000527158 Q8N1Y9 231 aa11.95□□□□□ -0.5
SNRNP35-204ENST00000527158 MRAP2Q96G30 205 aa11.95□□□□□ -0.5
SNRNP35-204ENST00000527158 DPH3P1Q9H4G8 78 aa11.95□□□□□ -0.5
SNRNP35-204ENST00000527158 SETD2Q9BYW2 2564 aaPredicted RBP11.94□□□□□ -0.5
SNRNP35-204ENST00000527158 SORL1Q92673 2214 aa11.94□□□□□ -0.5
SNRNP35-204ENST00000527158 IGHV3-16A0A0C4DH30 117 aa11.94□□□□□ -0.5
SNRNP35-204ENST00000527158 HIVEP1P15822 2718 aa11.94□□□□□ -0.5
SNRNP35-204ENST00000527158 TRGV11A0A075B6L2 103 aa11.94□□□□□ -0.5
SNRNP35-204ENST00000527158 RBMY1BA6NDE4 496 aaKnown RBP11.94□□□□□ -0.5
SNRNP35-204ENST00000527158 RBMY1EA6NEQ0 496 aaKnown RBP11.94□□□□□ -0.5
SNRNP35-204ENST00000527158 GAGE10A6NGK3 116 aa11.94□□□□□ -0.5
SNRNP35-204ENST00000527158 NXPH4O95158 308 aa11.94□□□□□ -0.5
SNRNP35-204ENST00000527158 IGLV1-51P01701 117 aa11.94□□□□□ -0.5
SNRNP35-204ENST00000527158 IGKCP01834 107 aa11.94□□□□□ -0.5
SNRNP35-204ENST00000527158 PRSS1P07477 247 aa11.94□□□□□ -0.5
SNRNP35-204ENST00000527158 RBMY1DP0C7P1 496 aaKnown RBP11.94□□□□□ -0.5
SNRNP35-204ENST00000527158 STHQ8IWL8 128 aa11.94□□□□□ -0.5
SNRNP35-204ENST00000527158 C14orf178Q8N769 122 aaPredicted RBP11.94□□□□□ -0.5
SNRNP35-204ENST00000527158 CLUHP3Q96NS8 147 aa11.94□□□□□ -0.5
SNRNP35-204ENST00000527158 CST9LQ9H4G1 147 aa11.94□□□□□ -0.5
SNRNP35-204ENST00000527158 AGRNO00468 2067 aa11.93□□□□□ -0.5
SNRNP35-204ENST00000527158 IGLV2-18A0A075B6J9 118 aa11.93□□□□□ -0.5
SNRNP35-204ENST00000527158 TRAV8-6A0A0B4J262 113 aa11.93□□□□□ -0.5
SNRNP35-204ENST00000527158 DPM2O94777 84 aa11.93□□□□□ -0.5
SNRNP35-204ENST00000527158 NMUP48645 174 aa11.93□□□□□ -0.5
SNRNP35-204ENST00000527158 MDFICQ9P1T7 246 aa11.93□□□□□ -0.5
SNRNP35-204ENST00000527158 K7EMI3 77 aa11.92□□□□□ -0.5
SNRNP35-204ENST00000527158 GAS8-AS1O95177 125 aa11.92□□□□□ -0.5
SNRNP35-204ENST00000527158 SMIM17P0DL12 118 aa11.92□□□□□ -0.5
SNRNP35-204ENST00000527158 LAGE3Q14657 143 aa11.92□□□□□ -0.5
SNRNP35-204ENST00000527158 C9orf85Q96MD7 179 aa11.92□□□□□ -0.5
SNRNP35-204ENST00000527158 DKK2Q9UBU2 259 aa11.92□□□□□ -0.5
SNRNP35-204ENST00000527158 NSD1Q96L73 2696 aaPredicted RBP11.92□□□□□ -0.5
SNRNP35-204ENST00000527158 SETXQ7Z333 2677 aaKnown RBP11.92□□□□□ -0.5
SNRNP35-204ENST00000527158 PCP4P48539 62 aa11.92□□□□□ -0.5
SNRNP35-204ENST00000527158 SYT8Q8NBV8 401 aa11.92□□□□□ -0.5
SNRNP35-204ENST00000527158 TMEM158Q8WZ71 300 aa11.92□□□□□ -0.5
SNRNP35-204ENST00000527158 FN1P02751 2386 aaKnown RBP11.91□□□□□ -0.5
SNRNP35-204ENST00000527158 TRAV26-2A0A0B4J265 109 aa11.91□□□□□ -0.5
SNRNP35-204ENST00000527158 K7ERU9 68 aa11.91□□□□□ -0.5
SNRNP35-204ENST00000527158 GATA1P15976 413 aaPredicted RBP11.91□□□□□ -0.5
SNRNP35-204ENST00000527158 OCIAD2Q56VL3 154 aa11.91□□□□□ -0.5
SNRNP35-204ENST00000527158 C18orf15Q96N68 181 aa11.91□□□□□ -0.5
SNRNP35-204ENST00000527158 WNK1Q9H4A3 2382 aa11.91□□□□□ -0.5
SNRNP35-204ENST00000527158 GAGE12BA1L429 117 aa11.91□□□□□ -0.5
SNRNP35-204ENST00000527158 RBMY1A1P0DJD3 496 aaKnown RBP11.91□□□□□ -0.5
SNRNP35-204ENST00000527158 RBMY1CP0DJD4 496 aa11.91□□□□□ -0.5
SNRNP35-204ENST00000527158 RBMY1FQ15415 496 aaKnown RBP11.91□□□□□ -0.5
SNRNP35-204ENST00000527158 HHLA3Q9XRX5 114 aa11.91□□□□□ -0.5
SNRNP35-204ENST00000527158 MGPP08493 103 aa11.9□□□□□ -0.5
SNRNP35-204ENST00000527158 HTN1P15515 57 aa11.9□□□□□ -0.5
SNRNP35-204ENST00000527158 NRACQ8N912 160 aa11.9□□□□□ -0.5
SNRNP35-204ENST00000527158 OR5A1Q8NGJ0 315 aa11.9□□□□□ -0.5
SNRNP35-204ENST00000527158 INSP01308 110 aa11.89□□□□□ -0.51
SNRNP35-204ENST00000527158 UFSP1Q6NVU6 142 aa11.89□□□□□ -0.51
SNRNP35-204ENST00000527158 LINC00482Q8N8I6 264 aa11.89□□□□□ -0.51
SNRNP35-204ENST00000527158 K7EP34 96 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms