RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 GAGE13Q4V321 117 aa10.58□□□□□ -0.72
PTPRU-210ENST00000527027 Q8N976 141 aa10.58□□□□□ -0.72
PTPRU-210ENST00000527027 SFT2D1Q8WV19 159 aa10.58□□□□□ -0.72
PTPRU-210ENST00000527027 CHAC1Q9BUX1 264 aa10.58□□□□□ -0.72
PTPRU-210ENST00000527027 FAT3Q8TDW7 4589 aa10.57□□□□□ -0.72
PTPRU-210ENST00000527027 A0A087WWC5 75 aa10.57□□□□□ -0.72
PTPRU-210ENST00000527027 RNASE3P12724 160 aaKnown RBP10.57□□□□□ -0.72
PTPRU-210ENST00000527027 ZFP2Q6ZN57 461 aa10.57□□□□□ -0.72
PTPRU-210ENST00000527027 RMI2Q96E14 147 aa10.57□□□□□ -0.72
PTPRU-210ENST00000527027 NKX6-2Q9C056 277 aaPredicted RBP10.57□□□□□ -0.72
PTPRU-210ENST00000527027 ARL14EPLP0DKL9 152 aa10.56□□□□□ -0.72
PTPRU-210ENST00000527027 LINC00694P0DN24 101 aa10.56□□□□□ -0.72
PTPRU-210ENST00000527027 GCHFRP30047 84 aa10.56□□□□□ -0.72
PTPRU-210ENST00000527027 TAGLN2P37802 199 aaKnown RBP10.56□□□□□ -0.72
PTPRU-210ENST00000527027 TMEM75Q8N9X5 138 aa10.56□□□□□ -0.72
PTPRU-210ENST00000527027 PARLQ9H300 379 aa10.56□□□□□ -0.72
PTPRU-210ENST00000527027 PSG8Q9UQ74 426 aa10.56□□□□□ -0.72
PTPRU-210ENST00000527027 ARL2-SNX15V9GYD0 113 aa10.56□□□□□ -0.72
PTPRU-210ENST00000527027 A8MWV9 139 aa10.55□□□□□ -0.72
PTPRU-210ENST00000527027 K7EQM0 130 aa10.55□□□□□ -0.72
PTPRU-210ENST00000527027 HMGB3O15347 200 aaKnown RBP10.55□□□□□ -0.72
PTPRU-210ENST00000527027 IFNA1P01562 189 aa10.55□□□□□ -0.72
PTPRU-210ENST00000527027 TCRAP04437 139 aa10.55□□□□□ -0.72
PTPRU-210ENST00000527027 ZNF726P1Q15940 193 aa10.55□□□□□ -0.72
PTPRU-210ENST00000527027 PIK3CD-AS1Q5SR53 167 aa10.55□□□□□ -0.72
PTPRU-210ENST00000527027 CYB561D1Q8N8Q1 229 aa10.55□□□□□ -0.72
PTPRU-210ENST00000527027 C5orf17Q8NAS9 161 aa10.55□□□□□ -0.72
PTPRU-210ENST00000527027 CIRBP-AS1Q8TBR5 109 aa10.55□□□□□ -0.72
PTPRU-210ENST00000527027 SUN5Q8TC36 379 aa10.55□□□□□ -0.72
PTPRU-210ENST00000527027 FHITP49789 147 aa10.54□□□□□ -0.72
PTPRU-210ENST00000527027 FGF8P55075 233 aaPredicted RBP10.54□□□□□ -0.72
PTPRU-210ENST00000527027 SMUG1Q53HV7 270 aa10.54□□□□□ -0.72
PTPRU-210ENST00000527027 LINC00479Q96M42 142 aa10.54□□□□□ -0.72
PTPRU-210ENST00000527027 MANBALQ9NQG1 85 aa10.54□□□□□ -0.72
PTPRU-210ENST00000527027 Q9UF83 564 aa10.54□□□□□ -0.72
PTPRU-210ENST00000527027 URGCP-MRPS24S4R325 110 aa10.54□□□□□ -0.72
PTPRU-210ENST00000527027 IGKV2D-24A0A075B6R9 120 aa10.53□□□□□ -0.72
PTPRU-210ENST00000527027 A0A1W2PRE2 83 aa10.53□□□□□ -0.72
PTPRU-210ENST00000527027 IGLV2-11P01706 119 aa10.53□□□□□ -0.72
PTPRU-210ENST00000527027 FLI1Q01543 452 aaPredicted RBP10.53□□□□□ -0.72
PTPRU-210ENST00000527027 SAMD10Q9BYL1 202 aa10.53□□□□□ -0.72
PTPRU-210ENST00000527027 S100A4P26447 101 aaKnown RBP10.52□□□□□ -0.73
PTPRU-210ENST00000527027 SAPCD1Q5SSQ6 148 aa10.52□□□□□ -0.73
PTPRU-210ENST00000527027 UFSP1Q6NVU6 142 aa10.52□□□□□ -0.73
PTPRU-210ENST00000527027 PRNTQ86SH4 94 aa10.52□□□□□ -0.73
PTPRU-210ENST00000527027 NIT1Q86X76 327 aa10.52□□□□□ -0.73
PTPRU-210ENST00000527027 DNAJC30Q96LL9 226 aa10.52□□□□□ -0.73
PTPRU-210ENST00000527027 TCEAL7Q9BRU2 100 aa10.52□□□□□ -0.73
PTPRU-210ENST00000527027 KLK12Q9UKR0 248 aa10.52□□□□□ -0.73
PTPRU-210ENST00000527027 PLA2G2DQ9UNK4 145 aa10.52□□□□□ -0.73
PTPRU-210ENST00000527027 IGKV3D-20A0A0C4DH25 116 aa10.51□□□□□ -0.73
PTPRU-210ENST00000527027 IGLV2-8P01709 118 aa10.51□□□□□ -0.73
PTPRU-210ENST00000527027 SUMO1P63165 101 aaKnown RBP10.51□□□□□ -0.73
PTPRU-210ENST00000527027 C14orf178Q8N769 122 aaPredicted RBP10.51□□□□□ -0.73
PTPRU-210ENST00000527027 LYPD6BQ8NI32 183 aa10.51□□□□□ -0.73
PTPRU-210ENST00000527027 JPT2Q9H910 190 aa10.51□□□□□ -0.73
PTPRU-210ENST00000527027 EPDR1Q9UM22 224 aa10.51□□□□□ -0.73
PTPRU-210ENST00000527027 ASIPP42127 132 aa10.49□□□□□ -0.73
PTPRU-210ENST00000527027 ELOBQ15370 118 aa10.49□□□□□ -0.73
PTPRU-210ENST00000527027 CLLU1Q5K131 121 aa10.49□□□□□ -0.73
PTPRU-210ENST00000527027 UBE2WQ96B02 151 aa10.49□□□□□ -0.73
PTPRU-210ENST00000527027 A0A087WX48 190 aa10.48□□□□□ -0.73
PTPRU-210ENST00000527027 FABP5P3A8MUU1 101 aa10.48□□□□□ -0.73
PTPRU-210ENST00000527027 DMRTA1Q5VZB9 504 aa10.48□□□□□ -0.73
PTPRU-210ENST00000527027 ATRAIDQ6UW56 229 aa10.48□□□□□ -0.73
PTPRU-210ENST00000527027 CHCHD7Q9BUK0 85 aa10.48□□□□□ -0.73
PTPRU-210ENST00000527027 IL36BQ9NZH7 164 aa10.48□□□□□ -0.73
PTPRU-210ENST00000527027 GNG13Q9P2W3 67 aa10.48□□□□□ -0.73
PTPRU-210ENST00000527027 A0A1B0GV50 99 aa10.47□□□□□ -0.73
PTPRU-210ENST00000527027 FAM74A7A6NL05 159 aa10.47□□□□□ -0.73
PTPRU-210ENST00000527027 RHODO00212 210 aa10.47□□□□□ -0.73
PTPRU-210ENST00000527027 NDUFS6O75380 124 aaKnown RBP10.47□□□□□ -0.73
PTPRU-210ENST00000527027 IFITM2Q01629 132 aa10.47□□□□□ -0.73
PTPRU-210ENST00000527027 CST9LP1Q5W188 147 aa10.47□□□□□ -0.73
PTPRU-210ENST00000527027 HIST1H2BAQ96A08 127 aa10.47□□□□□ -0.73
PTPRU-210ENST00000527027 VAX2Q9UIW0 290 aa10.47□□□□□ -0.73
PTPRU-210ENST00000527027 PAGE4O60829 102 aa10.46□□□□□ -0.73
PTPRU-210ENST00000527027 UBE2G2P60604 165 aa10.46□□□□□ -0.73
PTPRU-210ENST00000527027 Q0VG73 95 aa10.46□□□□□ -0.73
PTPRU-210ENST00000527027 C14orf177Q52M58 125 aa10.46□□□□□ -0.73
PTPRU-210ENST00000527027 KCNIP4Q6PIL6 250 aa10.46□□□□□ -0.73
PTPRU-210ENST00000527027 SMDT1Q9H4I9 107 aa10.46□□□□□ -0.73
PTPRU-210ENST00000527027 PKHD1L1Q86WI1 4243 aa10.45□□□□□ -0.74
PTPRU-210ENST00000527027 B4DEV8 164 aa10.45□□□□□ -0.74
PTPRU-210ENST00000527027 PDE6DO43924 150 aa10.45□□□□□ -0.74
PTPRU-210ENST00000527027 BCL2P10415 239 aa10.45□□□□□ -0.74
PTPRU-210ENST00000527027 RPL37AP61513 92 aaKnown RBP10.45□□□□□ -0.74
PTPRU-210ENST00000527027 DNLZQ5SXM8 178 aa10.45□□□□□ -0.74
PTPRU-210ENST00000527027 TRAV34A0A0B4J273 112 aa10.44□□□□□ -0.74
PTPRU-210ENST00000527027 H3BVH4 76 aa10.44□□□□□ -0.74
PTPRU-210ENST00000527027 S100A9P06702 114 aaKnown RBP10.44□□□□□ -0.74
PTPRU-210ENST00000527027 ARMS2P0C7Q2 107 aa10.44□□□□□ -0.74
PTPRU-210ENST00000527027 CCL20P78556 96 aa10.44□□□□□ -0.74
PTPRU-210ENST00000527027 MEF2BQ02080 365 aaPredicted RBP10.44□□□□□ -0.74
PTPRU-210ENST00000527027 FAM74A4Q5TZK3 123 aa10.44□□□□□ -0.74
PTPRU-210ENST00000527027 FAM210AQ96ND0 272 aa10.44□□□□□ -0.74
PTPRU-210ENST00000527027 PEA15Q15121 130 aa10.43□□□□□ -0.74
PTPRU-210ENST00000527027 SFRP2Q96HF1 295 aa10.43□□□□□ -0.74
PTPRU-210ENST00000527027 C1orf43Q9BWL3 253 aa10.43□□□□□ -0.74
PTPRU-210ENST00000527027 EIF5A2Q9GZV4 153 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms