RNA–Protein interactions for RNA: ENST00000526913.5

KNL1-203, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,584 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-203ENST00000526913 NUP35Q8NFH5 326 aa0.67□□□□□ -2.3
KNL1-203ENST00000526913 OR4C6Q8NH72 309 aa0.67□□□□□ -2.3
KNL1-203ENST00000526913 CLEC2BQ92478 149 aa0.67□□□□□ -2.3
KNL1-203ENST00000526913 NABP2Q9BQ15 211 aa0.67□□□□□ -2.3
KNL1-203ENST00000526913 SPANXA1Q9NS26 97 aa0.67□□□□□ -2.3
KNL1-203ENST00000526913 NCOR1O75376 2440 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 CDC42BPAQ5VT25 1732 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 STRCP1A6NGW2 1772 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 MUC12Q9UKN1 5478 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 TRAV40A0A0B4J280 105 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 SPRR5A0A1B0GTR4 108 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 TMEM235A6NFC5 223 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 CST7O76096 145 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 IFNA10P01566 189 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 SLC25A4P12235 298 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 COX4I1P13073 169 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 HINT1P49773 126 aaPredicted RBP0.66□□□□□ -2.3
KNL1-203ENST00000526913 AKR1D1P51857 326 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 HIST1H4AP62805 103 aaKnown RBP0.66□□□□□ -2.3
KNL1-203ENST00000526913 PSG9Q00887 426 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 KLRD1Q13241 179 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 AAED1Q7RTV5 226 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 OR51A4Q8NGJ6 313 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 TRAV13-1A0A0B4J241 112 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 IRGMA1A4Y4 181 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 ARL5CA6NH57 179 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 AIPO00170 330 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 GPX1P07203 203 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 PRR9Q5T870 116 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 BCL2L15Q5TBC7 163 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 EIF5AL1Q6IS14 154 aaKnown RBP0.66□□□□□ -2.3
KNL1-203ENST00000526913 DYNAPQ8N1N2 210 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 TCEAL4Q96EI5 215 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 ZNF625Q96I27 306 aaPredicted RBP0.66□□□□□ -2.3
KNL1-203ENST00000526913 ZNF714Q96N38 554 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 MND1Q9BWT6 205 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 FMN2Q9NZ56 1722 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 SORL1Q92673 2214 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 COL1A2P08123 1366 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 IGKV2-28A0A075B6P5 120 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 IGHV1-58A0A0C4DH39 117 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 LCE6AA0A183 80 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 MEIS3P1A6NDR6 274 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 C2orf70A6NJV1 201 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 C5orf58C9J3I9 102 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 ZNF670-ZNF695F2Z2N8 137 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 DLEU1O43261 78 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 IGKV2D-28P01615 120 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 AZU1P20160 251 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 RPS25P62851 125 aaKnown RBP0.66□□□□□ -2.3
KNL1-203ENST00000526913 ESRGQ1W209 222 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 SPRNQ5BIV9 151 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 IGFL1Q6UW32 110 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 OR5H6Q8NGV6 325 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 C2orf50Q96LR7 162 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 Q96M85 177 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 ALPK2Q86TB3 2170 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 KNTC1P50748 2209 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 KTN1Q86UP2 1357 aaKnown RBP0.66□□□□□ -2.3
KNL1-203ENST00000526913 TRAV5A0A0B4J249 113 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 GGCTO75223 188 aaKnown RBP0.66□□□□□ -2.3
KNL1-203ENST00000526913 SCTP09683 121 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 RPL26P61254 145 aaKnown RBP0.66□□□□□ -2.3
KNL1-203ENST00000526913 PLGLB1Q02325 96 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 TSC22D3Q99576 134 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 HIGD2AQ9BW72 106 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 BANF2Q9H503 90 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 COPZ2Q9P299 210 aa0.66□□□□□ -2.3
KNL1-203ENST00000526913 RPL26L1Q9UNX3 145 aaKnown RBP0.66□□□□□ -2.3
KNL1-203ENST00000526913 A6NN06 94 aa0.65□□□□□ -2.3
KNL1-203ENST00000526913 ATP6V1G2-DDX39BF2Z307 99 aa0.65□□□□□ -2.3
KNL1-203ENST00000526913 PAEPP09466 180 aa0.65□□□□□ -2.3
KNL1-203ENST00000526913 RNASE2P10153 161 aaKnown RBP0.65□□□□□ -2.3
KNL1-203ENST00000526913 KRTAP12-1P59990 96 aa0.65□□□□□ -2.3
KNL1-203ENST00000526913 GKN2Q86XP6 184 aa0.65□□□□□ -2.3
KNL1-203ENST00000526913 TCTE3Q8IZS6 198 aa0.65□□□□□ -2.3
KNL1-203ENST00000526913 Q8N2B8 174 aa0.65□□□□□ -2.3
KNL1-203ENST00000526913 NAT14Q8WUY8 206 aa0.65□□□□□ -2.3
KNL1-203ENST00000526913 CANT1Q8WVQ1 401 aa0.65□□□□□ -2.3
KNL1-203ENST00000526913 CXCL16Q9H2A7 254 aa0.65□□□□□ -2.3
KNL1-203ENST00000526913 NDUFA12Q9UI09 145 aa0.65□□□□□ -2.3
KNL1-203ENST00000526913 DSTQ03001 7570 aaKnown RBP0.65□□□□□ -2.3
KNL1-203ENST00000526913 ASCC3Q8N3C0 2202 aaKnown RBP0.65□□□□□ -2.3
KNL1-203ENST00000526913 TROQ12816 1431 aaPredicted RBP0.65□□□□□ -2.3
KNL1-203ENST00000526913 TRBV7-6A0A0J9YX20 115 aa0.65□□□□□ -2.31
KNL1-203ENST00000526913 SYNGR2O43760 224 aa0.65□□□□□ -2.31
KNL1-203ENST00000526913 IFNA17P01571 189 aa0.65□□□□□ -2.31
KNL1-203ENST00000526913 CD3DP04234 171 aa0.65□□□□□ -2.31
KNL1-203ENST00000526913 P0DMU3 169 aa0.65□□□□□ -2.31
KNL1-203ENST00000526913 FAM231AP0DMU4 169 aa0.65□□□□□ -2.31
KNL1-203ENST00000526913 FAM231CP0DMU5 169 aa0.65□□□□□ -2.31
KNL1-203ENST00000526913 IFI30P13284 250 aa0.65□□□□□ -2.31
KNL1-203ENST00000526913 ZNF25P17030 456 aaPredicted RBP0.65□□□□□ -2.31
KNL1-203ENST00000526913 CLLU1Q5K131 121 aa0.65□□□□□ -2.31
KNL1-203ENST00000526913 Q5VSD8 79 aa0.65□□□□□ -2.31
KNL1-203ENST00000526913 MIC13Q5XKP0 118 aa0.65□□□□□ -2.31
KNL1-203ENST00000526913 LIMD2Q9BT23 127 aa0.65□□□□□ -2.31
KNL1-203ENST00000526913 TTTY12Q9BZ98 90 aa0.65□□□□□ -2.31
KNL1-203ENST00000526913 PRO3102Q9H379 93 aa0.65□□□□□ -2.31
KNL1-203ENST00000526913 TPT1P8Q9HAU6 139 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms