RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 ZFP82Q8N141 532 aa7.07□□□□□ -1.28
VPS28-204ENST00000526054 C15orf54Q8N8G6 183 aa7.07□□□□□ -1.28
VPS28-204ENST00000526054 ZNF479Q96JC4 524 aa7.07□□□□□ -1.28
VPS28-204ENST00000526054 CTDSP1Q9GZU7 261 aa7.07□□□□□ -1.28
VPS28-204ENST00000526054 RPS10P5Q9NQ39 176 aa7.07□□□□□ -1.28
VPS28-204ENST00000526054 A0A087WWC5 75 aa7.06□□□□□ -1.28
VPS28-204ENST00000526054 A0A0J9YY99 117 aa7.06□□□□□ -1.28
VPS28-204ENST00000526054 A8MWV9 139 aa7.06□□□□□ -1.28
VPS28-204ENST00000526054 H3BNG1 76 aa7.06□□□□□ -1.28
VPS28-204ENST00000526054 RS1O15537 224 aa7.06□□□□□ -1.28
VPS28-204ENST00000526054 NUDT3O95989 172 aa7.06□□□□□ -1.28
VPS28-204ENST00000526054 FAM3BP58499 235 aaPredicted RBP7.06□□□□□ -1.28
VPS28-204ENST00000526054 ERVFC1-1P60608 527 aa7.06□□□□□ -1.28
VPS28-204ENST00000526054 FHL2Q14192 279 aa7.06□□□□□ -1.28
VPS28-204ENST00000526054 FAM231DQ6ZW35 169 aa7.06□□□□□ -1.28
VPS28-204ENST00000526054 ANAPC16Q96DE5 110 aa7.06□□□□□ -1.28
VPS28-204ENST00000526054 SFRP2Q96HF1 295 aa7.06□□□□□ -1.28
VPS28-204ENST00000526054 SCRT2Q9NQ03 307 aa7.06□□□□□ -1.28
VPS28-204ENST00000526054 PRO0255Q9UI72 69 aa7.06□□□□□ -1.28
VPS28-204ENST00000526054 M0R381 172 aa7.05□□□□□ -1.28
VPS28-204ENST00000526054 PAX4O43316 350 aa7.05□□□□□ -1.28
VPS28-204ENST00000526054 SNAI2O43623 268 aa7.05□□□□□ -1.28
VPS28-204ENST00000526054 OR5AL1P0C617 328 aa7.05□□□□□ -1.28
VPS28-204ENST00000526054 CFAP126Q5VTH2 177 aa7.05□□□□□ -1.28
VPS28-204ENST00000526054 ATRAIDQ6UW56 229 aa7.05□□□□□ -1.28
VPS28-204ENST00000526054 NUDT10Q8NFP7 164 aa7.05□□□□□ -1.28
VPS28-204ENST00000526054 OR10G8Q8NGN5 311 aa7.05□□□□□ -1.28
VPS28-204ENST00000526054 NUDT11Q96G61 164 aa7.05□□□□□ -1.28
VPS28-204ENST00000526054 RNASE7Q9H1E1 156 aaKnown RBP7.05□□□□□ -1.28
VPS28-204ENST00000526054 RPP21Q9H633 154 aaKnown RBP7.05□□□□□ -1.28
VPS28-204ENST00000526054 OSTCQ9NRP0 149 aa7.05□□□□□ -1.28
VPS28-204ENST00000526054 HHLA3Q9XRX5 114 aa7.05□□□□□ -1.28
VPS28-204ENST00000526054 A0A1W2PPQ1 181 aa7.04□□□□□ -1.28
VPS28-204ENST00000526054 RHODO00212 210 aa7.04□□□□□ -1.28
VPS28-204ENST00000526054 GATCO43716 136 aaKnown RBP7.04□□□□□ -1.28
VPS28-204ENST00000526054 CRYBA4P53673 196 aa7.04□□□□□ -1.28
VPS28-204ENST00000526054 SPANXN1Q5VSR9 72 aa7.04□□□□□ -1.28
VPS28-204ENST00000526054 DMRTA1Q5VZB9 504 aa7.04□□□□□ -1.28
VPS28-204ENST00000526054 FER1L6-AS1Q8NA97 138 aa7.04□□□□□ -1.28
VPS28-204ENST00000526054 OR10AG1Q8NH19 301 aa7.04□□□□□ -1.28
VPS28-204ENST00000526054 VSIG2Q96IQ7 327 aa7.04□□□□□ -1.28
VPS28-204ENST00000526054 TPPP3Q9BW30 176 aa7.04□□□□□ -1.28
VPS28-204ENST00000526054 SSBP4Q9BWG4 385 aaPredicted RBP7.04□□□□□ -1.28
VPS28-204ENST00000526054 TMEM242Q9NWH2 141 aa7.04□□□□□ -1.28
VPS28-204ENST00000526054 ICOSQ9Y6W8 199 aa7.04□□□□□ -1.28
VPS28-204ENST00000526054 LRP1BQ9NZR2 4599 aa7.03□□□□□ -1.28
VPS28-204ENST00000526054 NXPH4O95158 308 aa7.03□□□□□ -1.28
VPS28-204ENST00000526054 IGLC6P0CF74 106 aa7.03□□□□□ -1.28
VPS28-204ENST00000526054 GZMBP10144 247 aa7.03□□□□□ -1.28
VPS28-204ENST00000526054 GATA1P15976 413 aaPredicted RBP7.03□□□□□ -1.28
VPS28-204ENST00000526054 CACNG7P62955 275 aa7.03□□□□□ -1.28
VPS28-204ENST00000526054 CT83Q5H943 113 aa7.03□□□□□ -1.28
VPS28-204ENST00000526054 ZFP2Q6ZN57 461 aa7.03□□□□□ -1.28
VPS28-204ENST00000526054 SMCO4Q9NRQ5 59 aa7.03□□□□□ -1.28
VPS28-204ENST00000526054 IGHV3-73A0A0B4J1V6 119 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 NBDYA0A0U1RRE5 68 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 A8MWL6 223 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 C16orf90A8MZG2 172 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 F2Z2F3 143 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 SCO1O75880 301 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 GYPEP15421 78 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 S100PP25815 95 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 CCL18P55774 89 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 TNP2Q05952 138 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 RHOHQ15669 191 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 MRPL23Q16540 153 aaKnown RBP7.02□□□□□ -1.29
VPS28-204ENST00000526054 FAM74A4Q5TZK3 123 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 KCNIP4Q6PIL6 250 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 C6orf223Q8N319 242 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 ZNRF2Q8NHG8 242 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 AP1S3Q96PC3 154 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 PRADC1Q9BSG0 188 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 V9GYV3 84 aa7.02□□□□□ -1.29
VPS28-204ENST00000526054 A0A096LPF7 62 aa7.01□□□□□ -1.29
VPS28-204ENST00000526054 MUC21A0A0G2JKD1 596 aa7.01□□□□□ -1.29
VPS28-204ENST00000526054 MUC21A0A140T8X8 626 aa7.01□□□□□ -1.29
VPS28-204ENST00000526054 TRBV6-4A0A1B0GX49 114 aa7.01□□□□□ -1.29
VPS28-204ENST00000526054 SRIP30626 198 aa7.01□□□□□ -1.29
VPS28-204ENST00000526054 CTRLP40313 264 aa7.01□□□□□ -1.29
VPS28-204ENST00000526054 CBLN2Q8IUK8 224 aa7.01□□□□□ -1.29
VPS28-204ENST00000526054 IMMP2LQ96T52 175 aa7.01□□□□□ -1.29
VPS28-204ENST00000526054 SAMD10Q9BYL1 202 aa7.01□□□□□ -1.29
VPS28-204ENST00000526054 KRTAP4-5Q9BYR2 181 aa7.01□□□□□ -1.29
VPS28-204ENST00000526054 JPT2Q9H910 190 aa7.01□□□□□ -1.29
VPS28-204ENST00000526054 A0A087WWL8 130 aa7□□□□□ -1.29
VPS28-204ENST00000526054 K7EQD1 137 aa7□□□□□ -1.29
VPS28-204ENST00000526054 SMIM17P0DL12 118 aa7□□□□□ -1.29
VPS28-204ENST00000526054 SSTP61278 116 aa7□□□□□ -1.29
VPS28-204ENST00000526054 UFSP1Q6NVU6 142 aa7□□□□□ -1.29
VPS28-204ENST00000526054 LYZL1Q6UWQ5 148 aa7□□□□□ -1.29
VPS28-204ENST00000526054 SH2D6Q7Z4S9 175 aa7□□□□□ -1.29
VPS28-204ENST00000526054 SLC25A29Q8N8R3 303 aa7□□□□□ -1.29
VPS28-204ENST00000526054 LINC00588Q9Y4M8 146 aa7□□□□□ -1.29
VPS28-204ENST00000526054 APOBP04114 4563 aaKnown RBP6.99□□□□□ -1.29
VPS28-204ENST00000526054 SMIM27A0A1W2PRY6 76 aa6.99□□□□□ -1.29
VPS28-204ENST00000526054 CRYGDP07320 174 aa6.99□□□□□ -1.29
VPS28-204ENST00000526054 TRGC1P0CF51 173 aa6.99□□□□□ -1.29
VPS28-204ENST00000526054 ZNF56Q15929 161 aa6.99□□□□□ -1.29
VPS28-204ENST00000526054 WDR73Q6P4I2 378 aa6.99□□□□□ -1.29
VPS28-204ENST00000526054 NEGR1Q7Z3B1 354 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms