RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 FAM74A7A6NL05 159 aa10.73□□□□□ -0.69
HIF3A-208ENST00000524533 KRBOX1C9JBD0 128 aa10.73□□□□□ -0.69
HIF3A-208ENST00000524533 ARMS2P0C7Q2 107 aa10.73□□□□□ -0.69
HIF3A-208ENST00000524533 DNLZQ5SXM8 178 aa10.73□□□□□ -0.69
HIF3A-208ENST00000524533 BAALCQ8WXS3 180 aa10.73□□□□□ -0.69
HIF3A-208ENST00000524533 NKX6-2Q9C056 277 aaPredicted RBP10.73□□□□□ -0.69
HIF3A-208ENST00000524533 SH2D1AO60880 128 aa10.72□□□□□ -0.69
HIF3A-208ENST00000524533 SEC11BP0C7V7 166 aa10.72□□□□□ -0.69
HIF3A-208ENST00000524533 CRIP1P50238 77 aa10.72□□□□□ -0.69
HIF3A-208ENST00000524533 UBE2G1P62253 170 aa10.72□□□□□ -0.69
HIF3A-208ENST00000524533 AKR1C8PQ5T2L2 129 aa10.72□□□□□ -0.69
HIF3A-208ENST00000524533 NIT1Q86X76 327 aa10.72□□□□□ -0.69
HIF3A-208ENST00000524533 PHLDA3Q9Y5J5 127 aa10.72□□□□□ -0.69
HIF3A-208ENST00000524533 IGKV2D-24A0A075B6R9 120 aa10.71□□□□□ -0.69
HIF3A-208ENST00000524533 A0A087WWL8 130 aa10.71□□□□□ -0.69
HIF3A-208ENST00000524533 TPT1P13693 172 aaKnown RBP10.71□□□□□ -0.69
HIF3A-208ENST00000524533 FAM162BQ5T6X4 162 aa10.71□□□□□ -0.69
HIF3A-208ENST00000524533 SFRP2Q96HF1 295 aa10.71□□□□□ -0.69
HIF3A-208ENST00000524533 FMC1Q96HJ9 113 aa10.71□□□□□ -0.69
HIF3A-208ENST00000524533 ZFP30Q9Y2G7 519 aa10.71□□□□□ -0.69
HIF3A-208ENST00000524533 RBFOX3A6NFN3 312 aa10.7□□□□□ -0.7
HIF3A-208ENST00000524533 M0R381 172 aa10.7□□□□□ -0.7
HIF3A-208ENST00000524533 LINC01620Q4KN68 170 aa10.7□□□□□ -0.7
HIF3A-208ENST00000524533 COX8CQ7Z4L0 72 aa10.7□□□□□ -0.7
HIF3A-208ENST00000524533 DNAJC30Q96LL9 226 aa10.7□□□□□ -0.7
HIF3A-208ENST00000524533 KLK12Q9UKR0 248 aa10.7□□□□□ -0.7
HIF3A-208ENST00000524533 A0A087WX48 190 aa10.69□□□□□ -0.7
HIF3A-208ENST00000524533 TMSB15BA0A087X1C1 80 aa10.69□□□□□ -0.7
HIF3A-208ENST00000524533 MAP1LC3B2A6NCE7 125 aa10.69□□□□□ -0.7
HIF3A-208ENST00000524533 LINC01559Q495D7 138 aa10.69□□□□□ -0.7
HIF3A-208ENST00000524533 KCNIP4Q6PIL6 250 aa10.69□□□□□ -0.7
HIF3A-208ENST00000524533 SCXQ7RTU7 201 aa10.69□□□□□ -0.7
HIF3A-208ENST00000524533 Q8N976 141 aa10.69□□□□□ -0.7
HIF3A-208ENST00000524533 CHCHD7Q9BUK0 85 aa10.69□□□□□ -0.7
HIF3A-208ENST00000524533 MAP1LC3BQ9GZQ8 125 aa10.69□□□□□ -0.7
HIF3A-208ENST00000524533 RPL36AP83881 106 aaKnown RBP10.68□□□□□ -0.7
HIF3A-208ENST00000524533 ELOBQ15370 118 aa10.68□□□□□ -0.7
HIF3A-208ENST00000524533 ZFP82Q8N141 532 aa10.68□□□□□ -0.7
HIF3A-208ENST00000524533 RPL36ALQ969Q0 106 aaKnown RBP10.68□□□□□ -0.7
HIF3A-208ENST00000524533 UBE2WQ96B02 151 aa10.68□□□□□ -0.7
HIF3A-208ENST00000524533 TRBV10-1A0A0K0K1A3 114 aa10.67□□□□□ -0.7
HIF3A-208ENST00000524533 LTAP01374 205 aa10.67□□□□□ -0.7
HIF3A-208ENST00000524533 ZNF674Q2M3X9 581 aa10.67□□□□□ -0.7
HIF3A-208ENST00000524533 DEFB104AQ8WTQ1 72 aa10.67□□□□□ -0.7
HIF3A-208ENST00000524533 TCEAL7Q9BRU2 100 aa10.67□□□□□ -0.7
HIF3A-208ENST00000524533 TRBV6-1A0A0K0K1D8 114 aa10.66□□□□□ -0.7
HIF3A-208ENST00000524533 UBE2D3P61077 147 aa10.66□□□□□ -0.7
HIF3A-208ENST00000524533 UBE2D2P62837 147 aa10.66□□□□□ -0.7
HIF3A-208ENST00000524533 CST9LP1Q5W188 147 aa10.66□□□□□ -0.7
HIF3A-208ENST00000524533 TRBV7-3A0A075B6L6 115 aa10.65□□□□□ -0.7
HIF3A-208ENST00000524533 KRTAP29-1A8MX34 341 aaPredicted RBP10.65□□□□□ -0.7
HIF3A-208ENST00000524533 AKR1C3P42330 323 aa10.65□□□□□ -0.7
HIF3A-208ENST00000524533 FHITP49789 147 aa10.65□□□□□ -0.7
HIF3A-208ENST00000524533 ATRAIDQ6UW56 229 aa10.65□□□□□ -0.7
HIF3A-208ENST00000524533 STOML3Q8TAV4 291 aa10.65□□□□□ -0.7
HIF3A-208ENST00000524533 BATF3Q9NR55 127 aa10.65□□□□□ -0.7
HIF3A-208ENST00000524533 Q0VG73 95 aa10.64□□□□□ -0.71
HIF3A-208ENST00000524533 CHAC1Q9BUX1 264 aa10.64□□□□□ -0.71
HIF3A-208ENST00000524533 ARPC5O15511 151 aa10.63□□□□□ -0.71
HIF3A-208ENST00000524533 CRPP02741 224 aa10.63□□□□□ -0.71
HIF3A-208ENST00000524533 ZNF56Q15929 161 aa10.63□□□□□ -0.71
HIF3A-208ENST00000524533 OR10G8Q8NGN5 311 aa10.63□□□□□ -0.71
HIF3A-208ENST00000524533 C1orf43Q9BWL3 253 aa10.63□□□□□ -0.71
HIF3A-208ENST00000524533 TRBV6-8A0A0A6YYG3 113 aa10.62□□□□□ -0.71
HIF3A-208ENST00000524533 TMEM262E9PQX1 116 aa10.62□□□□□ -0.71
HIF3A-208ENST00000524533 G3V3Q6 166 aa10.62□□□□□ -0.71
HIF3A-208ENST00000524533 RAB4BP61018 213 aa10.62□□□□□ -0.71
HIF3A-208ENST00000524533 C14orf177Q52M58 125 aa10.62□□□□□ -0.71
HIF3A-208ENST00000524533 CYTL1Q9NRR1 136 aa10.62□□□□□ -0.71
HIF3A-208ENST00000524533 PAGE4O60829 102 aa10.61□□□□□ -0.71
HIF3A-208ENST00000524533 RPL19P84098 196 aaKnown RBP10.61□□□□□ -0.71
HIF3A-208ENST00000524533 C15orf54Q8N8G6 183 aa10.61□□□□□ -0.71
HIF3A-208ENST00000524533 NEXN-AS1Q8NBZ9 246 aa10.61□□□□□ -0.71
HIF3A-208ENST00000524533 OR10AG1Q8NH19 301 aa10.61□□□□□ -0.71
HIF3A-208ENST00000524533 CIRBP-AS1Q8TBR5 109 aa10.61□□□□□ -0.71
HIF3A-208ENST00000524533 CXCL1P09341 107 aa10.6□□□□□ -0.71
HIF3A-208ENST00000524533 MPV17L2Q567V2 206 aa10.6□□□□□ -0.71
HIF3A-208ENST00000524533 ENHOQ6UWT2 76 aa10.6□□□□□ -0.71
HIF3A-208ENST00000524533 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.6□□□□□ -0.71
HIF3A-208ENST00000524533 ZNF471Q9BX82 626 aaPredicted RBP10.6□□□□□ -0.71
HIF3A-208ENST00000524533 ANGP03950 147 aaKnown RBP10.59□□□□□ -0.71
HIF3A-208ENST00000524533 S100A9P06702 114 aaKnown RBP10.59□□□□□ -0.71
HIF3A-208ENST00000524533 KRTAP10-4P60372 401 aaPredicted RBP10.59□□□□□ -0.71
HIF3A-208ENST00000524533 PRR27Q6MZM9 219 aa10.59□□□□□ -0.71
HIF3A-208ENST00000524533 CHCHD5Q9BSY4 110 aa10.59□□□□□ -0.71
HIF3A-208ENST00000524533 SCO2A0A1W2PP80 73 aa10.58□□□□□ -0.72
HIF3A-208ENST00000524533 PFDN1O60925 122 aa10.58□□□□□ -0.72
HIF3A-208ENST00000524533 IGLV2-8P01709 118 aa10.58□□□□□ -0.72
HIF3A-208ENST00000524533 HLA-DQA1P01909 254 aa10.58□□□□□ -0.72
HIF3A-208ENST00000524533 PKIAP61925 76 aa10.58□□□□□ -0.72
HIF3A-208ENST00000524533 SPANXN1Q5VSR9 72 aa10.58□□□□□ -0.72
HIF3A-208ENST00000524533 FAM213BQ8TBF2 198 aa10.58□□□□□ -0.72
HIF3A-208ENST00000524533 SFT2D1Q8WV19 159 aa10.58□□□□□ -0.72
HIF3A-208ENST00000524533 MUC21A0A0G2JKD1 596 aa10.57□□□□□ -0.72
HIF3A-208ENST00000524533 MUC21A0A140T8X8 626 aa10.57□□□□□ -0.72
HIF3A-208ENST00000524533 A0A1B0GV50 99 aa10.57□□□□□ -0.72
HIF3A-208ENST00000524533 SNAI2O43623 268 aa10.57□□□□□ -0.72
HIF3A-208ENST00000524533 USP17L23D6RBM5 183 aa10.56□□□□□ -0.72
HIF3A-208ENST00000524533 F5H697 171 aa10.56□□□□□ -0.72
HIF3A-208ENST00000524533 OR5AL1P0C617 328 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms