RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 CSMD2Q7Z408 3487 aa8.25□□□□□ -1.09
HDAC9-228ENST00000524023 PIEZO1Q92508 2521 aa8.24□□□□□ -1.09
HDAC9-228ENST00000524023 IGLV4-69A0A075B6H9 119 aa8.24□□□□□ -1.09
HDAC9-228ENST00000524023 IGHV3-16A0A0C4DH30 117 aa8.24□□□□□ -1.09
HDAC9-228ENST00000524023 TMEM89A2RUT3 159 aa8.24□□□□□ -1.09
HDAC9-228ENST00000524023 LGALS9O00182 355 aa8.24□□□□□ -1.09
HDAC9-228ENST00000524023 COX6B1P14854 86 aa8.24□□□□□ -1.09
HDAC9-228ENST00000524023 RPL39P62891 51 aaKnown RBP8.24□□□□□ -1.09
HDAC9-228ENST00000524023 DEFB104AQ8WTQ1 72 aa8.24□□□□□ -1.09
HDAC9-228ENST00000524023 KIR2DL4Q99706 377 aa8.24□□□□□ -1.09
HDAC9-228ENST00000524023 TRAV12-2A0A075B6T6 113 aa8.24□□□□□ -1.09
HDAC9-228ENST00000524023 SDHAF1A6NFY7 115 aa8.24□□□□□ -1.09
HDAC9-228ENST00000524023 C11orf86A6NJI1 115 aa8.24□□□□□ -1.09
HDAC9-228ENST00000524023 ZNF815PA8K554 130 aa8.24□□□□□ -1.09
HDAC9-228ENST00000524023 IGKV3-20P01619 116 aa8.24□□□□□ -1.09
HDAC9-228ENST00000524023 DSCR9P59020 149 aa8.24□□□□□ -1.09
HDAC9-228ENST00000524023 SNRPD3P62318 126 aaKnown RBP8.24□□□□□ -1.09
HDAC9-228ENST00000524023 COTL1Q14019 142 aa8.24□□□□□ -1.09
HDAC9-228ENST00000524023 NRGNQ92686 78 aa8.24□□□□□ -1.09
HDAC9-228ENST00000524023 MDFICQ9P1T7 246 aa8.24□□□□□ -1.09
HDAC9-228ENST00000524023 TRBV6-5A0A0K0K1A5 114 aa8.23□□□□□ -1.09
HDAC9-228ENST00000524023 TRBV27A0A0K0K1C4 114 aa8.23□□□□□ -1.09
HDAC9-228ENST00000524023 K7EQG2 157 aa8.23□□□□□ -1.09
HDAC9-228ENST00000524023 RIPPLY3P57055 190 aa8.23□□□□□ -1.09
HDAC9-228ENST00000524023 SCGB2A2Q13296 93 aa8.23□□□□□ -1.09
HDAC9-228ENST00000524023 PMVKQ15126 192 aa8.23□□□□□ -1.09
HDAC9-228ENST00000524023 RRN3P1Q2M238 152 aa8.23□□□□□ -1.09
HDAC9-228ENST00000524023 CD300EQ496F6 205 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-228ENST00000524023 PAPPA-AS1Q5QFB9 102 aa8.23□□□□□ -1.09
HDAC9-228ENST00000524023 TMEM141Q96I45 108 aa8.23□□□□□ -1.09
HDAC9-228ENST00000524023 TIMM17AQ99595 171 aa8.23□□□□□ -1.09
HDAC9-228ENST00000524023 MYO18BQ8IUG5 2567 aa8.23□□□□□ -1.09
HDAC9-228ENST00000524023 FAM74A4Q5TZK3 123 aa8.22□□□□□ -1.09
HDAC9-228ENST00000524023 Q8N1Y9 231 aa8.22□□□□□ -1.09
HDAC9-228ENST00000524023 LINC01356Q8N9X3 169 aa8.22□□□□□ -1.09
HDAC9-228ENST00000524023 PLEKHB2Q96CS7 222 aa8.22□□□□□ -1.09
HDAC9-228ENST00000524023 USP9YO00507 2555 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-228ENST00000524023 MXRA5Q9NR99 2828 aa8.22□□□□□ -1.09
HDAC9-228ENST00000524023 DOPEY2Q9Y3R5 2298 aa8.22□□□□□ -1.09
HDAC9-228ENST00000524023 EMP1P54849 157 aa8.22□□□□□ -1.09
HDAC9-228ENST00000524023 RPL24P83731 157 aaKnown RBP8.22□□□□□ -1.09
HDAC9-228ENST00000524023 SCGB1D4Q6XE38 83 aa8.22□□□□□ -1.09
HDAC9-228ENST00000524023 KLHL30-AS1Q8NEE0 82 aa8.22□□□□□ -1.09
HDAC9-228ENST00000524023 ANKRD17O75179 2603 aaKnown RBP8.22□□□□□ -1.09
HDAC9-228ENST00000524023 CACNA1AO00555 2505 aa8.21□□□□□ -1.09
HDAC9-228ENST00000524023 SORL1Q92673 2214 aa8.21□□□□□ -1.09
HDAC9-228ENST00000524023 IGHV1OR15-1A0A075B7D0 117 aa8.21□□□□□ -1.09
HDAC9-228ENST00000524023 TEX48A0A1B0GUV7 120 aa8.21□□□□□ -1.09
HDAC9-228ENST00000524023 F8W1H4 67 aa8.21□□□□□ -1.09
HDAC9-228ENST00000524023 HOXA3O43365 443 aaPredicted RBP8.21□□□□□ -1.09
HDAC9-228ENST00000524023 SYNJ2BPP57105 145 aa8.21□□□□□ -1.09
HDAC9-228ENST00000524023 MORN3Q6PF18 240 aaPredicted RBP8.21□□□□□ -1.09
HDAC9-228ENST00000524023 SYT8Q8NBV8 401 aa8.21□□□□□ -1.09
HDAC9-228ENST00000524023 H3BMG7 143 aa8.21□□□□□ -1.1
HDAC9-228ENST00000524023 M0QY20 66 aa8.21□□□□□ -1.1
HDAC9-228ENST00000524023 HERVK_113P61574 105 aa8.21□□□□□ -1.1
HDAC9-228ENST00000524023 ZNF56Q15929 161 aa8.21□□□□□ -1.1
HDAC9-228ENST00000524023 SPINK13Q1W4C9 94 aa8.21□□□□□ -1.1
HDAC9-228ENST00000524023 ZNF256Q9Y2P7 627 aaPredicted RBP8.21□□□□□ -1.1
HDAC9-228ENST00000524023 A0A096LNT2 108 aa8.2□□□□□ -1.1
HDAC9-228ENST00000524023 TMEM238LA0A1B0GVL6 79 aa8.2□□□□□ -1.1
HDAC9-228ENST00000524023 A6NJY4 79 aa8.2□□□□□ -1.1
HDAC9-228ENST00000524023 SRSF9Q13242 221 aaKnown RBP eCLIP8.2□□□□□ -1.1
HDAC9-228ENST00000524023 WFDC2Q14508 124 aa8.2□□□□□ -1.1
HDAC9-228ENST00000524023 ZNF876PQ49A33 203 aa8.2□□□□□ -1.1
HDAC9-228ENST00000524023 AMTNQ6UX39 209 aa8.2□□□□□ -1.1
HDAC9-228ENST00000524023 CENPEQ02224 2701 aa8.19□□□□□ -1.1
HDAC9-228ENST00000524023 J3QLI3 93 aa8.19□□□□□ -1.1
HDAC9-228ENST00000524023 ZNRF2Q8NHG8 242 aa8.19□□□□□ -1.1
HDAC9-228ENST00000524023 DUX5Q96PT3 197 aa8.19□□□□□ -1.1
HDAC9-228ENST00000524023 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
HDAC9-228ENST00000524023 A0A0J9YY99 117 aa8.18□□□□□ -1.1
HDAC9-228ENST00000524023 TGFAP01135 160 aa8.18□□□□□ -1.1
HDAC9-228ENST00000524023 ELANEP08246 267 aa8.18□□□□□ -1.1
HDAC9-228ENST00000524023 HOXD3P31249 432 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-228ENST00000524023 UBE2D1P51668 147 aa8.18□□□□□ -1.1
HDAC9-228ENST00000524023 RHOHQ15669 191 aa8.18□□□□□ -1.1
HDAC9-228ENST00000524023 NSUN5P1Q3KNT7 163 aa8.18□□□□□ -1.1
HDAC9-228ENST00000524023 TMEM170BQ5T4T1 132 aa8.18□□□□□ -1.1
HDAC9-228ENST00000524023 TRPT1Q86TN4 253 aaKnown RBP8.18□□□□□ -1.1
HDAC9-228ENST00000524023 RNF152Q8N8N0 203 aa8.18□□□□□ -1.1
HDAC9-228ENST00000524023 MAPK1IP1LQ8NDC0 245 aa8.18□□□□□ -1.1
HDAC9-228ENST00000524023 FBN2P35556 2912 aa8.18□□□□□ -1.1
HDAC9-228ENST00000524023 TSPEAR-AS2P59090 65 aa8.18□□□□□ -1.1
HDAC9-228ENST00000524023 SPANXB1Q9NS25 103 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-228ENST00000524023 VPREB3Q9UKI3 123 aa8.18□□□□□ -1.1
HDAC9-228ENST00000524023 POLQO75417 2590 aa8.17□□□□□ -1.1
HDAC9-228ENST00000524023 P0DMU3 169 aa8.17□□□□□ -1.1
HDAC9-228ENST00000524023 FAM231AP0DMU4 169 aa8.17□□□□□ -1.1
HDAC9-228ENST00000524023 FAM231CP0DMU5 169 aa8.17□□□□□ -1.1
HDAC9-228ENST00000524023 GAGE13Q4V321 117 aa8.17□□□□□ -1.1
HDAC9-228ENST00000524023 ZNF702PQ9H963 129 aa8.17□□□□□ -1.1
HDAC9-228ENST00000524023 PRO0461Q9UI25 63 aa8.17□□□□□ -1.1
HDAC9-228ENST00000524023 CREBBPQ92793 2442 aa8.17□□□□□ -1.1
HDAC9-228ENST00000524023 NFE4Q86UQ8 179 aa8.17□□□□□ -1.1
HDAC9-228ENST00000524023 UBE2E2Q96LR5 201 aa8.17□□□□□ -1.1
HDAC9-228ENST00000524023 OPRPNQ99935 248 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-228ENST00000524023 MRPL16Q9NX20 251 aaKnown RBP8.17□□□□□ -1.1
HDAC9-228ENST00000524023 TRGV11A0A075B6L2 103 aa8.16□□□□□ -1.1
HDAC9-228ENST00000524023 C20orf203Q8NBC4 194 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms