RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 C11orf1Q9H5F2 150 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 UQCC1Q9NVA1 299 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 TIMM9Q9Y5J7 89 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 SONP18583 2426 aaKnown RBP1.79□□□□□ -2.12
SKP1-212ENST00000523966 ITPR1Q14643 2758 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 HIVEP2P31629 2446 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 TRAV1-1A0A0B4J248 108 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 IGSF23A1L1A6 192 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 ODF3BA8MYP8 253 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 C3orf84H3BNL1 204 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 J3QLI3 93 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 M0QZK8 103 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 FABP1P07148 127 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 MSMBP08118 114 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 SAA1P0DJI8 122 aaPredicted RBP1.78□□□□□ -2.12
SKP1-212ENST00000523966 IAPPP10997 89 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 FGF7P21781 194 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 S100A7P31151 101 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 REG1BP48304 166 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 DYNLT3P51808 116 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 SLC38A11Q08AI6 406 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 PEA15Q15121 130 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 PLGLAQ15195 96 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 LRRC75BQ2VPJ9 315 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 ACOT6Q3I5F7 207 aaPredicted RBP1.78□□□□□ -2.12
SKP1-212ENST00000523966 CENPWQ5EE01 88 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 SPNS3Q6ZMD2 512 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 VMO1Q7Z5L0 202 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 S100A7AQ86SG5 101 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 COMMD7Q86VX2 200 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 KRTAP13-1Q8IUC0 172 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 RNASEH2CQ8TDP1 164 aaKnown RBP1.78□□□□□ -2.12
SKP1-212ENST00000523966 ZCCHC13Q8WW36 166 aaKnown RBP1.78□□□□□ -2.12
SKP1-212ENST00000523966 C20orf166-AS1Q96NR2 134 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 OR4C12Q96R67 309 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 SMIM3Q9BZL3 60 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 WDR61Q9GZS3 305 aaKnown RBP1.78□□□□□ -2.12
SKP1-212ENST00000523966 NPVFQ9HCQ7 196 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 NDUFA4L2Q9NRX3 87 aa1.78□□□□□ -2.12
SKP1-212ENST00000523966 RELNP78509 3460 aa1.78□□□□□ -2.13
SKP1-212ENST00000523966 ACANP16112 2415 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 TEX50A0A1B0GTY4 177 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 A0A1B0GW64 132 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 I3L521 148 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 NPFFO15130 113 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 NDUFA3O95167 84 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 CNIH1O95406 144 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 MT-CO2P00403 227 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 IFNA1P01562 189 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 IGHV1-69P01742 117 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 OR13C7P0DN81 318 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 DEFA4P12838 97 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 ATP6V0CP27449 155 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 RPL27AP46776 148 aaKnown RBP1.77□□□□□ -2.13
SKP1-212ENST00000523966 TAS2R45P59539 299 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 UBE2G2P60604 165 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 AKR1C1Q04828 323 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 TMEM267Q0VDI3 215 aaPredicted RBP1.77□□□□□ -2.13
SKP1-212ENST00000523966 HES1Q14469 280 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 FXYD3Q14802 87 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 CLEC12BQ2HXU8 276 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 DEFB113Q30KQ7 82 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 FAM74A1Q5RGS3 127 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 EBLN2Q6P2I7 272 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 SCXQ7RTU7 201 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 FAM213BQ8TBF2 198 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 SFT2D1Q8WV19 159 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 MBD3L1Q8WWY6 194 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 TXNDC17Q9BRA2 123 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 NPCDR1Q9BY65 106 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 SLC39A9Q9NUM3 307 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 METTL1Q9UBP6 276 aaKnown RBP1.77□□□□□ -2.13
SKP1-212ENST00000523966 HILPDAQ9Y5L2 63 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 PUS1Q9Y606 427 aaKnown RBP eCLIP1.77□□□□□ -2.13
SKP1-212ENST00000523966 MTORP42345 2549 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 LRBAP50851 2863 aa1.77□□□□□ -2.13
SKP1-212ENST00000523966 MAP1AP78559 2803 aaPredicted RBP1.76□□□□□ -2.13
SKP1-212ENST00000523966 TRAV30A0A087WSZ9 112 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 TRAV3A0A0B4J244 114 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 CTXND1A0A1B0GTU2 59 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 UBE2L5PA0A1B0GUS4 154 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 IGLC7A0M8Q6 106 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 TMEM218A2RU14 115 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 HLA-DRB1P01911 266 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 HIST1H1BP16401 226 aaKnown RBP1.76□□□□□ -2.13
SKP1-212ENST00000523966 CDC34P49427 236 aaPredicted RBP1.76□□□□□ -2.13
SKP1-212ENST00000523966 PSMB3P49720 205 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 B2MP61769 119 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 RHOBP62745 196 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 RUNX1Q01196 453 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 WT1-ASQ06250 92 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 DIAPH2-AS1Q14236 149 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 AKIRIN2Q53H80 203 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 KHDC3LQ587J8 217 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 SPINK9Q5DT21 86 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 SLC35E3Q7Z769 313 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 SVBPQ8N300 66 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 Q8N6K4 173 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 OR4X1Q8NH49 305 aa1.76□□□□□ -2.13
SKP1-212ENST00000523966 ZNRF2Q8NHG8 242 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms