RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 GAGE1Q13065 139 aa5.96□□□□□ -1.46
CTNNA1-240ENST00000523912 GAGE4Q13068 117 aa5.96□□□□□ -1.46
CTNNA1-240ENST00000523912 GAGE5Q13069 117 aa5.96□□□□□ -1.46
CTNNA1-240ENST00000523912 GAGE13Q4V321 117 aa5.96□□□□□ -1.46
CTNNA1-240ENST00000523912 KCNIP4Q6PIL6 250 aa5.96□□□□□ -1.46
CTNNA1-240ENST00000523912 ZFP82Q8N141 532 aa5.96□□□□□ -1.46
CTNNA1-240ENST00000523912 RMI2Q96E14 147 aa5.96□□□□□ -1.46
CTNNA1-240ENST00000523912 TRBV6-1A0A0K0K1D8 114 aa5.95□□□□□ -1.46
CTNNA1-240ENST00000523912 INAFM2P0DMQ5 153 aa5.95□□□□□ -1.46
CTNNA1-240ENST00000523912 KRTAP10-1P60331 282 aa5.95□□□□□ -1.46
CTNNA1-240ENST00000523912 FAM74A4Q5TZK3 123 aa5.95□□□□□ -1.46
CTNNA1-240ENST00000523912 COX8CQ7Z4L0 72 aa5.95□□□□□ -1.46
CTNNA1-240ENST00000523912 Q8N814 137 aa5.95□□□□□ -1.46
CTNNA1-240ENST00000523912 FAM213BQ8TBF2 198 aa5.95□□□□□ -1.46
CTNNA1-240ENST00000523912 ZC2HC1AQ96GY0 325 aa5.95□□□□□ -1.46
CTNNA1-240ENST00000523912 COX11Q9Y6N1 276 aa5.95□□□□□ -1.46
CTNNA1-240ENST00000523912 KRBOX1C9JBD0 128 aa5.94□□□□□ -1.46
CTNNA1-240ENST00000523912 M0R381 172 aa5.94□□□□□ -1.46
CTNNA1-240ENST00000523912 LTAP01374 205 aa5.94□□□□□ -1.46
CTNNA1-240ENST00000523912 S100A9P06702 114 aaKnown RBP5.94□□□□□ -1.46
CTNNA1-240ENST00000523912 ARMS2P0C7Q2 107 aa5.94□□□□□ -1.46
CTNNA1-240ENST00000523912 LINC00694P0DN24 101 aa5.94□□□□□ -1.46
CTNNA1-240ENST00000523912 SULT1A2P50226 295 aa5.94□□□□□ -1.46
CTNNA1-240ENST00000523912 LINC01559Q495D7 138 aa5.94□□□□□ -1.46
CTNNA1-240ENST00000523912 DNLZQ5SXM8 178 aa5.94□□□□□ -1.46
CTNNA1-240ENST00000523912 DMRTA1Q5VZB9 504 aa5.94□□□□□ -1.46
CTNNA1-240ENST00000523912 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.94□□□□□ -1.46
CTNNA1-240ENST00000523912 TMEM70Q9BUB7 260 aa5.94□□□□□ -1.46
CTNNA1-240ENST00000523912 FAT1Q14517 4588 aa5.94□□□□□ -1.46
CTNNA1-240ENST00000523912 A0A087WWL8 130 aa5.93□□□□□ -1.46
CTNNA1-240ENST00000523912 TMSB15BA0A087X1C1 80 aa5.93□□□□□ -1.46
CTNNA1-240ENST00000523912 TRBV10-1A0A0K0K1A3 114 aa5.93□□□□□ -1.46
CTNNA1-240ENST00000523912 GRIFINA4D1Z8 144 aa5.93□□□□□ -1.46
CTNNA1-240ENST00000523912 LRCOL1A6NCL2 159 aa5.93□□□□□ -1.46
CTNNA1-240ENST00000523912 RPL36AP83881 106 aaKnown RBP5.93□□□□□ -1.46
CTNNA1-240ENST00000523912 ELOBQ15370 118 aa5.93□□□□□ -1.46
CTNNA1-240ENST00000523912 ZNF674Q2M3X9 581 aa5.93□□□□□ -1.46
CTNNA1-240ENST00000523912 Q5VSD8 79 aa5.93□□□□□ -1.46
CTNNA1-240ENST00000523912 UFSP1Q6NVU6 142 aa5.93□□□□□ -1.46
CTNNA1-240ENST00000523912 ALKAL2Q6UX46 152 aa5.93□□□□□ -1.46
CTNNA1-240ENST00000523912 Q6ZSN1 163 aa5.93□□□□□ -1.46
CTNNA1-240ENST00000523912 C14orf178Q8N769 122 aaPredicted RBP5.93□□□□□ -1.46
CTNNA1-240ENST00000523912 SFT2D1Q8WV19 159 aa5.93□□□□□ -1.46
CTNNA1-240ENST00000523912 RPL36ALQ969Q0 106 aaKnown RBP5.93□□□□□ -1.46
CTNNA1-240ENST00000523912 A0A087WX48 190 aa5.92□□□□□ -1.46
CTNNA1-240ENST00000523912 FAM229AH3BQW9 127 aa5.92□□□□□ -1.46
CTNNA1-240ENST00000523912 TEX46H3BTG2 121 aa5.92□□□□□ -1.46
CTNNA1-240ENST00000523912 PAGE4O60829 102 aa5.92□□□□□ -1.46
CTNNA1-240ENST00000523912 H2AFB1P0C5Y9 115 aa5.92□□□□□ -1.46
CTNNA1-240ENST00000523912 CRIP1P50238 77 aa5.92□□□□□ -1.46
CTNNA1-240ENST00000523912 XGP55808 180 aa5.92□□□□□ -1.46
CTNNA1-240ENST00000523912 MBD3L1Q8WWY6 194 aa5.92□□□□□ -1.46
CTNNA1-240ENST00000523912 SFRP2Q96HF1 295 aa5.92□□□□□ -1.46
CTNNA1-240ENST00000523912 CHCHD7Q9BUK0 85 aa5.92□□□□□ -1.46
CTNNA1-240ENST00000523912 SAMD10Q9BYL1 202 aa5.92□□□□□ -1.46
CTNNA1-240ENST00000523912 JPT2Q9H910 190 aa5.92□□□□□ -1.46
CTNNA1-240ENST00000523912 FLG2Q5D862 2391 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-240ENST00000523912 TRAV1-1A0A0B4J248 108 aa5.91□□□□□ -1.46
CTNNA1-240ENST00000523912 A0A1B0GV50 99 aa5.91□□□□□ -1.46
CTNNA1-240ENST00000523912 CXCL1P09341 107 aa5.91□□□□□ -1.46
CTNNA1-240ENST00000523912 PKIAP61925 76 aa5.91□□□□□ -1.46
CTNNA1-240ENST00000523912 ZNF56Q15929 161 aa5.91□□□□□ -1.46
CTNNA1-240ENST00000523912 BAGE2Q86Y30 109 aa5.91□□□□□ -1.46
CTNNA1-240ENST00000523912 TRBV7-3A0A075B6L6 115 aa5.9□□□□□ -1.46
CTNNA1-240ENST00000523912 SCO2A0A1W2PP80 73 aa5.9□□□□□ -1.46
CTNNA1-240ENST00000523912 SMIM17P0DL12 118 aa5.9□□□□□ -1.46
CTNNA1-240ENST00000523912 SPANXN1Q5VSR9 72 aa5.9□□□□□ -1.46
CTNNA1-240ENST00000523912 DAZ4Q86SG3 579 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-240ENST00000523912 NIT1Q86X76 327 aa5.9□□□□□ -1.46
CTNNA1-240ENST00000523912 MANBALQ9NQG1 85 aa5.9□□□□□ -1.46
CTNNA1-240ENST00000523912 DAZ3Q9NR90 486 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-240ENST00000523912 IGKV2D-24A0A075B6R9 120 aa5.89□□□□□ -1.47
CTNNA1-240ENST00000523912 IFNA1P01562 189 aa5.89□□□□□ -1.47
CTNNA1-240ENST00000523912 CRPP02741 224 aa5.89□□□□□ -1.47
CTNNA1-240ENST00000523912 RAB4BP61018 213 aa5.89□□□□□ -1.47
CTNNA1-240ENST00000523912 BLOC1S1P78537 153 aa5.89□□□□□ -1.47
CTNNA1-240ENST00000523912 Q0VG73 95 aa5.89□□□□□ -1.47
CTNNA1-240ENST00000523912 PRR27Q6MZM9 219 aa5.89□□□□□ -1.47
CTNNA1-240ENST00000523912 TEX261Q6UWH6 196 aa5.89□□□□□ -1.47
CTNNA1-240ENST00000523912 Q8N3U1 123 aa5.89□□□□□ -1.47
CTNNA1-240ENST00000523912 Q8N976 141 aa5.89□□□□□ -1.47
CTNNA1-240ENST00000523912 OR10G8Q8NGN5 311 aa5.89□□□□□ -1.47
CTNNA1-240ENST00000523912 UBE2WQ96B02 151 aa5.89□□□□□ -1.47
CTNNA1-240ENST00000523912 AP1S3Q96PC3 154 aa5.89□□□□□ -1.47
CTNNA1-240ENST00000523912 VPS13BQ7Z7G8 4022 aa5.89□□□□□ -1.47
CTNNA1-240ENST00000523912 HERC1Q15751 4861 aa5.88□□□□□ -1.47
CTNNA1-240ENST00000523912 RBFOX3A6NFN3 312 aa5.88□□□□□ -1.47
CTNNA1-240ENST00000523912 TMEM262E9PQX1 116 aa5.88□□□□□ -1.47
CTNNA1-240ENST00000523912 F5H697 171 aa5.88□□□□□ -1.47
CTNNA1-240ENST00000523912 LECT2O14960 151 aa5.88□□□□□ -1.47
CTNNA1-240ENST00000523912 SMR3BP02814 79 aaPredicted RBP5.88□□□□□ -1.47
CTNNA1-240ENST00000523912 OR5AL1P0C617 328 aa5.88□□□□□ -1.47
CTNNA1-240ENST00000523912 UBE2D3P61077 147 aa5.88□□□□□ -1.47
CTNNA1-240ENST00000523912 UBE2D2P62837 147 aa5.88□□□□□ -1.47
CTNNA1-240ENST00000523912 C14orf177Q52M58 125 aa5.88□□□□□ -1.47
CTNNA1-240ENST00000523912 TMEM97Q5BJF2 176 aa5.88□□□□□ -1.47
CTNNA1-240ENST00000523912 OR10AG1Q8NH19 301 aa5.88□□□□□ -1.47
CTNNA1-240ENST00000523912 GNG13Q9P2W3 67 aa5.88□□□□□ -1.47
CTNNA1-240ENST00000523912 KLK12Q9UKR0 248 aa5.88□□□□□ -1.47
CTNNA1-240ENST00000523912 SRRM2Q9UQ35 2752 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms