RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 MLST8Q9BVC4 326 aa8.28□□□□□ -1.08
VEGFA-223ENST00000523125 XGP55808 180 aa8.27□□□□□ -1.09
VEGFA-223ENST00000523125 KRTAP10-1P60331 282 aa8.27□□□□□ -1.09
VEGFA-223ENST00000523125 TMUB2Q71RG4 321 aa8.27□□□□□ -1.09
VEGFA-223ENST00000523125 SYT8Q8NBV8 401 aa8.27□□□□□ -1.09
VEGFA-223ENST00000523125 PHLDA3Q9Y5J5 127 aa8.27□□□□□ -1.09
VEGFA-223ENST00000523125 A0A087WWL8 130 aa8.26□□□□□ -1.09
VEGFA-223ENST00000523125 M0R381 172 aa8.26□□□□□ -1.09
VEGFA-223ENST00000523125 RHODO00212 210 aa8.26□□□□□ -1.09
VEGFA-223ENST00000523125 S100A9P06702 114 aaKnown RBP8.26□□□□□ -1.09
VEGFA-223ENST00000523125 H2AFB1P0C5Y9 115 aa8.26□□□□□ -1.09
VEGFA-223ENST00000523125 TPT1P13693 172 aaKnown RBP8.26□□□□□ -1.09
VEGFA-223ENST00000523125 CCL20P78556 96 aa8.26□□□□□ -1.09
VEGFA-223ENST00000523125 RPL19P84098 196 aaKnown RBP8.26□□□□□ -1.09
VEGFA-223ENST00000523125 FAM74A4Q5TZK3 123 aa8.26□□□□□ -1.09
VEGFA-223ENST00000523125 Q9HAA7 133 aa8.26□□□□□ -1.09
VEGFA-223ENST00000523125 LAGE3Q14657 143 aa8.25□□□□□ -1.09
VEGFA-223ENST00000523125 BAGE2Q86Y30 109 aa8.25□□□□□ -1.09
VEGFA-223ENST00000523125 PSCAO43653 123 aa8.24□□□□□ -1.09
VEGFA-223ENST00000523125 PFDN1O60925 122 aa8.24□□□□□ -1.09
VEGFA-223ENST00000523125 EIF5AP63241 154 aaKnown RBP8.24□□□□□ -1.09
VEGFA-223ENST00000523125 DAZ4Q86SG3 579 aaKnown RBP8.24□□□□□ -1.09
VEGFA-223ENST00000523125 ZFP82Q8N141 532 aa8.24□□□□□ -1.09
VEGFA-223ENST00000523125 SSBP4Q9BWG4 385 aaPredicted RBP8.24□□□□□ -1.09
VEGFA-223ENST00000523125 DAZ3Q9NR90 486 aaKnown RBP8.24□□□□□ -1.09
VEGFA-223ENST00000523125 A0A087WWC5 75 aa8.23□□□□□ -1.09
VEGFA-223ENST00000523125 TRAV1-1A0A0B4J248 108 aa8.23□□□□□ -1.09
VEGFA-223ENST00000523125 CXCL1P09341 107 aa8.23□□□□□ -1.09
VEGFA-223ENST00000523125 GCSHP23434 173 aa8.23□□□□□ -1.09
VEGFA-223ENST00000523125 OR10AG1Q8NH19 301 aa8.23□□□□□ -1.09
VEGFA-223ENST00000523125 DERL1Q9BUN8 251 aa8.23□□□□□ -1.09
VEGFA-223ENST00000523125 SNAI2O43623 268 aa8.22□□□□□ -1.09
VEGFA-223ENST00000523125 RPL35P42766 123 aaKnown RBP8.22□□□□□ -1.09
VEGFA-223ENST00000523125 WFDC2Q14508 124 aa8.22□□□□□ -1.09
VEGFA-223ENST00000523125 Q8N814 137 aa8.22□□□□□ -1.09
VEGFA-223ENST00000523125 C11orf52Q96A22 123 aa8.22□□□□□ -1.09
VEGFA-223ENST00000523125 GNG13Q9P2W3 67 aa8.22□□□□□ -1.09
VEGFA-223ENST00000523125 TRBV10-1A0A0K0K1A3 114 aa8.21□□□□□ -1.1
VEGFA-223ENST00000523125 OR5AL1P0C617 328 aa8.21□□□□□ -1.1
VEGFA-223ENST00000523125 UBE2D3P61077 147 aa8.21□□□□□ -1.1
VEGFA-223ENST00000523125 UBE2D2P62837 147 aa8.21□□□□□ -1.1
VEGFA-223ENST00000523125 PRR27Q6MZM9 219 aa8.21□□□□□ -1.1
VEGFA-223ENST00000523125 NIT1Q86X76 327 aa8.21□□□□□ -1.1
VEGFA-223ENST00000523125 NTN5Q8WTR8 489 aaPredicted RBP8.21□□□□□ -1.1
VEGFA-223ENST00000523125 DNAJC30Q96LL9 226 aa8.21□□□□□ -1.1
VEGFA-223ENST00000523125 MANBALQ9NQG1 85 aa8.21□□□□□ -1.1
VEGFA-223ENST00000523125 SRRM2Q9UQ35 2752 aaKnown RBP8.21□□□□□ -1.1
VEGFA-223ENST00000523125 TRBV7-3A0A075B6L6 115 aa8.2□□□□□ -1.1
VEGFA-223ENST00000523125 IGLV5-52A0A0A0MRZ9 124 aa8.2□□□□□ -1.1
VEGFA-223ENST00000523125 TRAV8-3A0A0A6YYJ7 113 aa8.2□□□□□ -1.1
VEGFA-223ENST00000523125 MUC21A0A0G2JKD1 596 aa8.2□□□□□ -1.1
VEGFA-223ENST00000523125 MUC21A0A140T8X8 626 aa8.2□□□□□ -1.1
VEGFA-223ENST00000523125 IGLV2-8P01709 118 aa8.2□□□□□ -1.1
VEGFA-223ENST00000523125 SULT1A2P50226 295 aa8.2□□□□□ -1.1
VEGFA-223ENST00000523125 RAB5CP51148 216 aa8.2□□□□□ -1.1
VEGFA-223ENST00000523125 RAB4BP61018 213 aa8.2□□□□□ -1.1
VEGFA-223ENST00000523125 TCTE3Q8IZS6 198 aa8.2□□□□□ -1.1
VEGFA-223ENST00000523125 OR10G8Q8NGN5 311 aa8.2□□□□□ -1.1
VEGFA-223ENST00000523125 TM2D2Q9BX73 214 aa8.2□□□□□ -1.1
VEGFA-223ENST00000523125 FAT1Q14517 4588 aa8.2□□□□□ -1.1
VEGFA-223ENST00000523125 VPS13BQ7Z7G8 4022 aa8.2□□□□□ -1.1
VEGFA-223ENST00000523125 EPM2AB3EWF7 344 aa8.19□□□□□ -1.1
VEGFA-223ENST00000523125 RPL36AP83881 106 aaKnown RBP8.19□□□□□ -1.1
VEGFA-223ENST00000523125 NEXN-AS1Q8NBZ9 246 aa8.19□□□□□ -1.1
VEGFA-223ENST00000523125 RPL36ALQ969Q0 106 aaKnown RBP8.19□□□□□ -1.1
VEGFA-223ENST00000523125 KIF25-AS1Q9Y6Z4 181 aa8.19□□□□□ -1.1
VEGFA-223ENST00000523125 RAB19A4D1S5 217 aa8.18□□□□□ -1.1
VEGFA-223ENST00000523125 CENPWQ5EE01 88 aa8.18□□□□□ -1.1
VEGFA-223ENST00000523125 EIF5AL1Q6IS14 154 aaKnown RBP8.18□□□□□ -1.1
VEGFA-223ENST00000523125 TRBV20OR9-2A0A075B6H5 130 aa8.17□□□□□ -1.1
VEGFA-223ENST00000523125 C19orf71A6NCJ1 209 aa8.17□□□□□ -1.1
VEGFA-223ENST00000523125 LECT2O14960 151 aa8.17□□□□□ -1.1
VEGFA-223ENST00000523125 C1QBP02746 253 aa8.17□□□□□ -1.1
VEGFA-223ENST00000523125 IGLC6P0CF74 106 aa8.17□□□□□ -1.1
VEGFA-223ENST00000523125 GZMBP10144 247 aa8.17□□□□□ -1.1
VEGFA-223ENST00000523125 SSTP61278 116 aa8.17□□□□□ -1.1
VEGFA-223ENST00000523125 HAMPP81172 84 aa8.17□□□□□ -1.1
VEGFA-223ENST00000523125 MEF2BQ02080 365 aaPredicted RBP8.17□□□□□ -1.1
VEGFA-223ENST00000523125 ZNF56Q15929 161 aa8.17□□□□□ -1.1
VEGFA-223ENST00000523125 TOR2AQ5JU69 321 aa8.17□□□□□ -1.1
VEGFA-223ENST00000523125 SPANXN1Q5VSR9 72 aa8.17□□□□□ -1.1
VEGFA-223ENST00000523125 TMEM70Q9BUB7 260 aa8.17□□□□□ -1.1
VEGFA-223ENST00000523125 FAM30AQ9NZY2 134 aa8.17□□□□□ -1.1
VEGFA-223ENST00000523125 KLK12Q9UKR0 248 aa8.17□□□□□ -1.1
VEGFA-223ENST00000523125 URGCP-MRPS24S4R325 110 aa8.17□□□□□ -1.1
VEGFA-223ENST00000523125 TRBV6-8A0A0A6YYG3 113 aa8.16□□□□□ -1.1
VEGFA-223ENST00000523125 SMR3BP02814 79 aaPredicted RBP8.16□□□□□ -1.1
VEGFA-223ENST00000523125 Q5VSD8 79 aa8.16□□□□□ -1.1
VEGFA-223ENST00000523125 Q6ZNX1 250 aa8.16□□□□□ -1.1
VEGFA-223ENST00000523125 BAALCQ8WXS3 180 aa8.16□□□□□ -1.1
VEGFA-223ENST00000523125 DNAH8Q96JB1 4490 aa8.16□□□□□ -1.1
VEGFA-223ENST00000523125 CHCHD7Q9BUK0 85 aa8.16□□□□□ -1.1
VEGFA-223ENST00000523125 A0A087WX48 190 aa8.15□□□□□ -1.1
VEGFA-223ENST00000523125 RBFOX3A6NFN3 312 aa8.15□□□□□ -1.1
VEGFA-223ENST00000523125 TEX46H3BTG2 121 aa8.15□□□□□ -1.1
VEGFA-223ENST00000523125 PDE6DO43924 150 aa8.15□□□□□ -1.1
VEGFA-223ENST00000523125 ATRAIDQ6UW56 229 aa8.15□□□□□ -1.1
VEGFA-223ENST00000523125 NTM-AS1Q6ZSK4 140 aa8.15□□□□□ -1.1
VEGFA-223ENST00000523125 SLC51BQ86UW2 128 aa8.15□□□□□ -1.1
VEGFA-223ENST00000523125 SMIM12Q96EX1 92 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms