RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 IL36BQ9NZH7 164 aa10.13□□□□□ -0.79
MRPS28-209ENST00000522987 FXYD6-FXYD2A0A087WZ82 144 aa10.12□□□□□ -0.79
MRPS28-209ENST00000522987 KRBOX1C9JBD0 128 aa10.12□□□□□ -0.79
MRPS28-209ENST00000522987 SYT8Q8NBV8 401 aa10.12□□□□□ -0.79
MRPS28-209ENST00000522987 A0A087WWC5 75 aa10.11□□□□□ -0.79
MRPS28-209ENST00000522987 CTXND1A0A1B0GTU2 59 aa10.11□□□□□ -0.79
MRPS28-209ENST00000522987 RNF222A6NCQ9 220 aa10.11□□□□□ -0.79
MRPS28-209ENST00000522987 FAM74A7A6NL05 159 aa10.11□□□□□ -0.79
MRPS28-209ENST00000522987 PHLDA3Q9Y5J5 127 aa10.11□□□□□ -0.79
MRPS28-209ENST00000522987 RHODO00212 210 aa10.1□□□□□ -0.79
MRPS28-209ENST00000522987 TPT1P13693 172 aaKnown RBP10.1□□□□□ -0.79
MRPS28-209ENST00000522987 INO80EQ8NBZ0 244 aaPredicted RBP10.1□□□□□ -0.79
MRPS28-209ENST00000522987 RMI2Q96E14 147 aa10.1□□□□□ -0.79
MRPS28-209ENST00000522987 A0A087WX48 190 aa10.09□□□□□ -0.79
MRPS28-209ENST00000522987 BORCS7-ASMTA0A0B4J1R7 106 aa10.09□□□□□ -0.79
MRPS28-209ENST00000522987 UBE2G1P62253 170 aa10.09□□□□□ -0.79
MRPS28-209ENST00000522987 PIK3CD-AS1Q5SR53 167 aa10.09□□□□□ -0.79
MRPS28-209ENST00000522987 SFRP2Q96HF1 295 aa10.09□□□□□ -0.79
MRPS28-209ENST00000522987 KRTAP29-1A8MX34 341 aaPredicted RBP10.08□□□□□ -0.8
MRPS28-209ENST00000522987 SSTP61278 116 aa10.08□□□□□ -0.8
MRPS28-209ENST00000522987 AKR1C8PQ5T2L2 129 aa10.08□□□□□ -0.8
MRPS28-209ENST00000522987 FAM162BQ5T6X4 162 aa10.08□□□□□ -0.8
MRPS28-209ENST00000522987 Q8N976 141 aa10.08□□□□□ -0.8
MRPS28-209ENST00000522987 DEFB104AQ8WTQ1 72 aa10.08□□□□□ -0.8
MRPS28-209ENST00000522987 COX11Q9Y6N1 276 aa10.08□□□□□ -0.8
MRPS28-209ENST00000522987 MUC21A0A0G2JKD1 596 aa10.07□□□□□ -0.8
MRPS28-209ENST00000522987 MUC21A0A140T8X8 626 aa10.07□□□□□ -0.8
MRPS28-209ENST00000522987 MAP1LC3B2A6NCE7 125 aa10.07□□□□□ -0.8
MRPS28-209ENST00000522987 TMEM262E9PQX1 116 aa10.07□□□□□ -0.8
MRPS28-209ENST00000522987 IGLV2-8P01709 118 aa10.07□□□□□ -0.8
MRPS28-209ENST00000522987 RPL19P84098 196 aaKnown RBP10.07□□□□□ -0.8
MRPS28-209ENST00000522987 CST9LP1Q5W188 147 aa10.07□□□□□ -0.8
MRPS28-209ENST00000522987 KCNIP4Q6PIL6 250 aa10.07□□□□□ -0.8
MRPS28-209ENST00000522987 CIRBP-AS1Q8TBR5 109 aa10.07□□□□□ -0.8
MRPS28-209ENST00000522987 CHAC1Q9BUX1 264 aa10.07□□□□□ -0.8
MRPS28-209ENST00000522987 MAP1LC3BQ9GZQ8 125 aa10.07□□□□□ -0.8
MRPS28-209ENST00000522987 A0A1B0GV50 99 aa10.06□□□□□ -0.8
MRPS28-209ENST00000522987 GIPP09681 153 aaPredicted RBP10.06□□□□□ -0.8
MRPS28-209ENST00000522987 RPL36AP83881 106 aaKnown RBP10.06□□□□□ -0.8
MRPS28-209ENST00000522987 ZNF56Q15929 161 aa10.06□□□□□ -0.8
MRPS28-209ENST00000522987 DNLZQ5SXM8 178 aa10.06□□□□□ -0.8
MRPS28-209ENST00000522987 C15orf54Q8N8G6 183 aa10.06□□□□□ -0.8
MRPS28-209ENST00000522987 RPL36ALQ969Q0 106 aaKnown RBP10.06□□□□□ -0.8
MRPS28-209ENST00000522987 HIST1H2BAQ96A08 127 aa10.06□□□□□ -0.8
MRPS28-209ENST00000522987 AKR1C3P42330 323 aa10.05□□□□□ -0.8
MRPS28-209ENST00000522987 KRTAP10-4P60372 401 aaPredicted RBP10.05□□□□□ -0.8
MRPS28-209ENST00000522987 UBE2D3P61077 147 aa10.05□□□□□ -0.8
MRPS28-209ENST00000522987 UBE2D2P62837 147 aa10.05□□□□□ -0.8
MRPS28-209ENST00000522987 ZNF674Q2M3X9 581 aa10.05□□□□□ -0.8
MRPS28-209ENST00000522987 ZFP82Q8N141 532 aa10.05□□□□□ -0.8
MRPS28-209ENST00000522987 FMC1Q96HJ9 113 aa10.05□□□□□ -0.8
MRPS28-209ENST00000522987 ZFP30Q9Y2G7 519 aa10.05□□□□□ -0.8
MRPS28-209ENST00000522987 TRBV7-3A0A075B6L6 115 aa10.04□□□□□ -0.8
MRPS28-209ENST00000522987 HLA-DQA1P01909 254 aa10.04□□□□□ -0.8
MRPS28-209ENST00000522987 FHITP49789 147 aa10.04□□□□□ -0.8
MRPS28-209ENST00000522987 LINC01559Q495D7 138 aa10.04□□□□□ -0.8
MRPS28-209ENST00000522987 MPV17L2Q567V2 206 aa10.04□□□□□ -0.8
MRPS28-209ENST00000522987 CLPSL2Q6UWE3 100 aa10.04□□□□□ -0.8
MRPS28-209ENST00000522987 ENHOQ6UWT2 76 aa10.04□□□□□ -0.8
MRPS28-209ENST00000522987 OR10AG1Q8NH19 301 aa10.04□□□□□ -0.8
MRPS28-209ENST00000522987 C1orf43Q9BWL3 253 aa10.04□□□□□ -0.8
MRPS28-209ENST00000522987 LRP1Q07954 4544 aaKnown RBP10.04□□□□□ -0.8
MRPS28-209ENST00000522987 PTTG1O95997 202 aa10.03□□□□□ -0.8
MRPS28-209ENST00000522987 CRPP02741 224 aa10.03□□□□□ -0.8
MRPS28-209ENST00000522987 ANGP03950 147 aaKnown RBP10.03□□□□□ -0.8
MRPS28-209ENST00000522987 SEC11BP0C7V7 166 aa10.03□□□□□ -0.8
MRPS28-209ENST00000522987 ELOBQ15370 118 aa10.03□□□□□ -0.8
MRPS28-209ENST00000522987 STOML3Q8TAV4 291 aa10.03□□□□□ -0.8
MRPS28-209ENST00000522987 NKX6-2Q9C056 277 aaPredicted RBP10.03□□□□□ -0.8
MRPS28-209ENST00000522987 SMLR1H3BR10 107 aa10.02□□□□□ -0.81
MRPS28-209ENST00000522987 ARPC5O15511 151 aa10.02□□□□□ -0.81
MRPS28-209ENST00000522987 PAGE4O60829 102 aa10.02□□□□□ -0.81
MRPS28-209ENST00000522987 LTAP01374 205 aa10.02□□□□□ -0.81
MRPS28-209ENST00000522987 NEXN-AS1Q8NBZ9 246 aa10.02□□□□□ -0.81
MRPS28-209ENST00000522987 CHCHD5Q9BSY4 110 aa10.02□□□□□ -0.81
MRPS28-209ENST00000522987 TRBV6-8A0A0A6YYG3 113 aa10.01□□□□□ -0.81
MRPS28-209ENST00000522987 TRBV10-1A0A0K0K1A3 114 aa10.01□□□□□ -0.81
MRPS28-209ENST00000522987 USP17L23D6RBM5 183 aa10.01□□□□□ -0.81
MRPS28-209ENST00000522987 PRR27Q6MZM9 219 aa10.01□□□□□ -0.81
MRPS28-209ENST00000522987 ATRAIDQ6UW56 229 aa10.01□□□□□ -0.81
MRPS28-209ENST00000522987 COX8CQ7Z4L0 72 aa10.01□□□□□ -0.81
MRPS28-209ENST00000522987 CHCHD7Q9BUK0 85 aa10.01□□□□□ -0.81
MRPS28-209ENST00000522987 CYTL1Q9NRR1 136 aa10.01□□□□□ -0.81
MRPS28-209ENST00000522987 SCO2A0A1W2PP80 73 aa10□□□□□ -0.81
MRPS28-209ENST00000522987 F5H697 171 aa10□□□□□ -0.81
MRPS28-209ENST00000522987 G3V3Q6 166 aa10□□□□□ -0.81
MRPS28-209ENST00000522987 Q0VG73 95 aa10□□□□□ -0.81
MRPS28-209ENST00000522987 HNRNPA3P51991 378 aaKnown RBP9.99□□□□□ -0.81
MRPS28-209ENST00000522987 RAB4BP61018 213 aa9.99□□□□□ -0.81
MRPS28-209ENST00000522987 GAGE6Q13070 117 aa9.99□□□□□ -0.81
MRPS28-209ENST00000522987 ZNF471Q9BX82 626 aaPredicted RBP9.99□□□□□ -0.81
MRPS28-209ENST00000522987 FAT3Q8TDW7 4589 aa9.99□□□□□ -0.81
MRPS28-209ENST00000522987 PKHD1L1Q86WI1 4243 aa9.98□□□□□ -0.81
MRPS28-209ENST00000522987 TRBV6-1A0A0K0K1D8 114 aa9.98□□□□□ -0.81
MRPS28-209ENST00000522987 PRSS1P07477 247 aa9.98□□□□□ -0.81
MRPS28-209ENST00000522987 RPL37AP61513 92 aaKnown RBP9.98□□□□□ -0.81
MRPS28-209ENST00000522987 C14orf177Q52M58 125 aa9.98□□□□□ -0.81
MRPS28-209ENST00000522987 SPANXN1Q5VSR9 72 aa9.98□□□□□ -0.81
MRPS28-209ENST00000522987 NTM-AS1Q6ZSK4 140 aa9.98□□□□□ -0.81
MRPS28-209ENST00000522987 OR10G8Q8NGN5 311 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms