RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 TENM2Q9NT68 2774 aa8.42□□□□□ -1.06
PVT1-215ENST00000522963 A0A087WWL8 130 aa8.41□□□□□ -1.06
PVT1-215ENST00000522963 DEFB131BA0A096LNP1 70 aa8.41□□□□□ -1.06
PVT1-215ENST00000522963 TRAV10A0A0B4J240 114 aa8.41□□□□□ -1.06
PVT1-215ENST00000522963 LCE6AA0A183 80 aa8.41□□□□□ -1.06
PVT1-215ENST00000522963 A8MWV9 139 aa8.41□□□□□ -1.06
PVT1-215ENST00000522963 CRYGDP07320 174 aa8.41□□□□□ -1.06
PVT1-215ENST00000522963 S100A1P23297 94 aa8.41□□□□□ -1.06
PVT1-215ENST00000522963 RIGQ13278 110 aa8.41□□□□□ -1.06
PVT1-215ENST00000522963 UFSP1Q6NVU6 142 aa8.41□□□□□ -1.06
PVT1-215ENST00000522963 MRPL54Q6P161 138 aaKnown RBP8.41□□□□□ -1.06
PVT1-215ENST00000522963 KCNIP4Q6PIL6 250 aa8.41□□□□□ -1.06
PVT1-215ENST00000522963 C14orf178Q8N769 122 aaPredicted RBP8.41□□□□□ -1.06
PVT1-215ENST00000522963 OR4C5Q8NGB2 326 aa8.41□□□□□ -1.06
PVT1-215ENST00000522963 IGHV3-73A0A0B4J1V6 119 aa8.4□□□□□ -1.06
PVT1-215ENST00000522963 A0A1B0GXF2 115 aa8.4□□□□□ -1.06
PVT1-215ENST00000522963 TRGC1P0CF51 173 aa8.4□□□□□ -1.06
PVT1-215ENST00000522963 EVI2AP22794 236 aa8.4□□□□□ -1.06
PVT1-215ENST00000522963 S100PP25815 95 aa8.4□□□□□ -1.06
PVT1-215ENST00000522963 BTF3L4Q96K17 158 aa8.4□□□□□ -1.06
PVT1-215ENST00000522963 AP1S3Q96PC3 154 aa8.4□□□□□ -1.06
PVT1-215ENST00000522963 KIF25-AS1Q9Y6Z4 181 aa8.4□□□□□ -1.06
PVT1-215ENST00000522963 LY6G6CO95867 125 aa8.39□□□□□ -1.07
PVT1-215ENST00000522963 ATP5G1P05496 136 aa8.39□□□□□ -1.07
PVT1-215ENST00000522963 HOXA5P20719 270 aa8.39□□□□□ -1.07
PVT1-215ENST00000522963 FHL2Q14192 279 aa8.39□□□□□ -1.07
PVT1-215ENST00000522963 FAM74A4Q5TZK3 123 aa8.39□□□□□ -1.07
PVT1-215ENST00000522963 TMEM88Q6PEY1 159 aa8.39□□□□□ -1.07
PVT1-215ENST00000522963 CBLN2Q8IUK8 224 aa8.39□□□□□ -1.07
PVT1-215ENST00000522963 TRAV9-1A0A075B6T8 112 aa8.38□□□□□ -1.07
PVT1-215ENST00000522963 A0A1B0GW15 77 aa8.38□□□□□ -1.07
PVT1-215ENST00000522963 F5H768 121 aa8.38□□□□□ -1.07
PVT1-215ENST00000522963 SCO1O75880 301 aa8.38□□□□□ -1.07
PVT1-215ENST00000522963 CAMPP49913 170 aa8.38□□□□□ -1.07
PVT1-215ENST00000522963 LINC00315P59091 139 aa8.38□□□□□ -1.07
PVT1-215ENST00000522963 HBBP68871 147 aa8.38□□□□□ -1.07
PVT1-215ENST00000522963 ZFP2Q6ZN57 461 aa8.38□□□□□ -1.07
PVT1-215ENST00000522963 Q6ZSN1 163 aa8.38□□□□□ -1.07
PVT1-215ENST00000522963 ATP5L2Q7Z4Y8 100 aa8.38□□□□□ -1.07
PVT1-215ENST00000522963 YPEL4Q96NS1 127 aa8.38□□□□□ -1.07
PVT1-215ENST00000522963 SMCO4Q9NRQ5 59 aa8.38□□□□□ -1.07
PVT1-215ENST00000522963 CSMD3Q7Z407 3707 aa8.38□□□□□ -1.07
PVT1-215ENST00000522963 TGIF2-C20orf24A0A0A6YYL0 155 aa8.37□□□□□ -1.07
PVT1-215ENST00000522963 TRGV4A0A0C4DH28 118 aa8.37□□□□□ -1.07
PVT1-215ENST00000522963 RHODO00212 210 aa8.37□□□□□ -1.07
PVT1-215ENST00000522963 CIDEAO60543 219 aa8.37□□□□□ -1.07
PVT1-215ENST00000522963 SMIM17P0DL12 118 aa8.37□□□□□ -1.07
PVT1-215ENST00000522963 GATA1P15976 413 aaPredicted RBP8.37□□□□□ -1.07
PVT1-215ENST00000522963 ELOBQ15370 118 aa8.37□□□□□ -1.07
PVT1-215ENST00000522963 SMIM15Q7Z3B0 74 aa8.37□□□□□ -1.07
PVT1-215ENST00000522963 GATD1Q8NB37 220 aa8.37□□□□□ -1.07
PVT1-215ENST00000522963 TMEM191AQ9H0A3 160 aa8.37□□□□□ -1.07
PVT1-215ENST00000522963 DPH3P1Q9H4G8 78 aa8.37□□□□□ -1.07
PVT1-215ENST00000522963 STARD9Q9P2P6 4700 aa8.37□□□□□ -1.07
PVT1-215ENST00000522963 MGPP08493 103 aa8.36□□□□□ -1.07
PVT1-215ENST00000522963 LINC00476Q8WZB0 136 aa8.36□□□□□ -1.07
PVT1-215ENST00000522963 KMT2CQ8NEZ4 4911 aaKnown RBP8.36□□□□□ -1.07
PVT1-215ENST00000522963 TRBV24-1A0A075B6N3 115 aa8.35□□□□□ -1.07
PVT1-215ENST00000522963 S100A8P05109 93 aa8.35□□□□□ -1.07
PVT1-215ENST00000522963 ZNF56Q15929 161 aa8.35□□□□□ -1.07
PVT1-215ENST00000522963 RASL11AQ6T310 242 aa8.35□□□□□ -1.07
PVT1-215ENST00000522963 AMN1Q8IY45 258 aa8.35□□□□□ -1.07
PVT1-215ENST00000522963 RNF185Q96GF1 192 aa8.35□□□□□ -1.07
PVT1-215ENST00000522963 APLNQ9ULZ1 77 aa8.35□□□□□ -1.07
PVT1-215ENST00000522963 HHLA3Q9XRX5 114 aa8.35□□□□□ -1.07
PVT1-215ENST00000522963 A0A0J9YY99 117 aa8.34□□□□□ -1.07
PVT1-215ENST00000522963 F5H697 171 aa8.34□□□□□ -1.07
PVT1-215ENST00000522963 RAB4AP20338 218 aa8.34□□□□□ -1.07
PVT1-215ENST00000522963 CRYBA4P53673 196 aa8.34□□□□□ -1.07
PVT1-215ENST00000522963 RAB4BP61018 213 aa8.34□□□□□ -1.07
PVT1-215ENST00000522963 SLAQ13239 276 aa8.34□□□□□ -1.07
PVT1-215ENST00000522963 FAM104BQ5XKR9 115 aa8.34□□□□□ -1.07
PVT1-215ENST00000522963 SUMO4Q6EEV6 95 aa8.34□□□□□ -1.07
PVT1-215ENST00000522963 TMEM136Q6ZRR5 245 aa8.34□□□□□ -1.07
PVT1-215ENST00000522963 SLC25A29Q8N8R3 303 aa8.34□□□□□ -1.07
PVT1-215ENST00000522963 VSIG2Q96IQ7 327 aa8.34□□□□□ -1.07
PVT1-215ENST00000522963 PRO0255Q9UI72 69 aa8.34□□□□□ -1.07
PVT1-215ENST00000522963 NACAE9PAV3 2078 aa8.33□□□□□ -1.08
PVT1-215ENST00000522963 TRAV26-1A0A087WT03 109 aa8.33□□□□□ -1.08
PVT1-215ENST00000522963 TRBV6-4A0A1B0GX49 114 aa8.33□□□□□ -1.08
PVT1-215ENST00000522963 K7EQD1 137 aa8.33□□□□□ -1.08
PVT1-215ENST00000522963 PAX4O43316 350 aa8.33□□□□□ -1.08
PVT1-215ENST00000522963 P0DMU3 169 aa8.33□□□□□ -1.08
PVT1-215ENST00000522963 FAM231AP0DMU4 169 aa8.33□□□□□ -1.08
PVT1-215ENST00000522963 FAM231CP0DMU5 169 aa8.33□□□□□ -1.08
PVT1-215ENST00000522963 RYR3Q15413 4870 aa8.33□□□□□ -1.08
PVT1-215ENST00000522963 FAM210BQ96KR6 192 aa8.33□□□□□ -1.08
PVT1-215ENST00000522963 Q9UF83 564 aa8.33□□□□□ -1.08
PVT1-215ENST00000522963 TRAV26-2A0A0B4J265 109 aa8.32□□□□□ -1.08
PVT1-215ENST00000522963 LOC100131303A0A0U1RQF7 123 aa8.32□□□□□ -1.08
PVT1-215ENST00000522963 M0QY20 66 aa8.32□□□□□ -1.08
PVT1-215ENST00000522963 TCTAP57738 103 aa8.32□□□□□ -1.08
PVT1-215ENST00000522963 MRPL51Q4U2R6 128 aaKnown RBP8.32□□□□□ -1.08
PVT1-215ENST00000522963 DYNC2H1Q8NCM8 4307 aaKnown RBP8.31□□□□□ -1.08
PVT1-215ENST00000522963 COLCA2A8K830 154 aa8.31□□□□□ -1.08
PVT1-215ENST00000522963 SMKR1H3BMG3 65 aa8.31□□□□□ -1.08
PVT1-215ENST00000522963 GAS8-AS1O95177 125 aa8.31□□□□□ -1.08
PVT1-215ENST00000522963 RHOHQ15669 191 aa8.31□□□□□ -1.08
PVT1-215ENST00000522963 PRADC1Q9BSG0 188 aa8.31□□□□□ -1.08
PVT1-215ENST00000522963 GNB1LQ9BYB4 327 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms