RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 RETNQ9HD89 108 aa9.36□□□□□ -0.91
CPNE3-205ENST00000522240 MSRB1Q9NZV6 116 aa9.36□□□□□ -0.91
CPNE3-205ENST00000522240 TEX48A0A1B0GUV7 120 aa9.35□□□□□ -0.91
CPNE3-205ENST00000522240 A8MWV9 139 aa9.35□□□□□ -0.91
CPNE3-205ENST00000522240 RPS10P46783 165 aaKnown RBP9.35□□□□□ -0.91
CPNE3-205ENST00000522240 RAB4BP61018 213 aa9.35□□□□□ -0.91
CPNE3-205ENST00000522240 SSTP61278 116 aa9.35□□□□□ -0.91
CPNE3-205ENST00000522240 B9D2Q9BPU9 175 aa9.35□□□□□ -0.91
CPNE3-205ENST00000522240 DPH3P1Q9H4G8 78 aa9.35□□□□□ -0.91
CPNE3-205ENST00000522240 NOP10Q9NPE3 64 aaKnown RBP9.35□□□□□ -0.91
CPNE3-205ENST00000522240 MRPL16Q9NX20 251 aaKnown RBP9.35□□□□□ -0.91
CPNE3-205ENST00000522240 TRGV1A0A0A0MS02 117 aa9.34□□□□□ -0.91
CPNE3-205ENST00000522240 FAM104BQ5XKR9 115 aa9.34□□□□□ -0.91
CPNE3-205ENST00000522240 LINC00612Q8N6U2 182 aa9.34□□□□□ -0.91
CPNE3-205ENST00000522240 TRAPPC1Q9Y5R8 145 aa9.34□□□□□ -0.91
CPNE3-205ENST00000522240 TENM3Q9P273 2699 aa9.34□□□□□ -0.91
CPNE3-205ENST00000522240 H3BS24 57 aa9.33□□□□□ -0.92
CPNE3-205ENST00000522240 RHODO00212 210 aa9.33□□□□□ -0.92
CPNE3-205ENST00000522240 RS1O15537 224 aa9.33□□□□□ -0.92
CPNE3-205ENST00000522240 SMIM17P0DL12 118 aa9.33□□□□□ -0.92
CPNE3-205ENST00000522240 EVI2AP22794 236 aa9.33□□□□□ -0.92
CPNE3-205ENST00000522240 Q6ZTI0 123 aa9.33□□□□□ -0.92
CPNE3-205ENST00000522240 FRZBQ92765 325 aa9.33□□□□□ -0.92
CPNE3-205ENST00000522240 C18orf15Q96N68 181 aa9.33□□□□□ -0.92
CPNE3-205ENST00000522240 KIF25-AS1Q9Y6Z4 181 aa9.33□□□□□ -0.92
CPNE3-205ENST00000522240 TRAV4A0A0B4J268 109 aa9.32□□□□□ -0.92
CPNE3-205ENST00000522240 CIDEAO60543 219 aa9.32□□□□□ -0.92
CPNE3-205ENST00000522240 APCSP02743 223 aa9.32□□□□□ -0.92
CPNE3-205ENST00000522240 SLAQ13239 276 aa9.32□□□□□ -0.92
CPNE3-205ENST00000522240 AMN1Q8IY45 258 aa9.32□□□□□ -0.92
CPNE3-205ENST00000522240 POM121L12Q8N7R1 296 aa9.32□□□□□ -0.92
CPNE3-205ENST00000522240 RNF185Q96GF1 192 aa9.32□□□□□ -0.92
CPNE3-205ENST00000522240 ZMAT4Q9H898 229 aa9.32□□□□□ -0.92
CPNE3-205ENST00000522240 DKK2Q9UBU2 259 aa9.32□□□□□ -0.92
CPNE3-205ENST00000522240 PHOX2AO14813 284 aa9.31□□□□□ -0.92
CPNE3-205ENST00000522240 TRGC2P03986 189 aa9.31□□□□□ -0.92
CPNE3-205ENST00000522240 CRYGDP07320 174 aa9.31□□□□□ -0.92
CPNE3-205ENST00000522240 EMP1P54849 157 aa9.31□□□□□ -0.92
CPNE3-205ENST00000522240 FABP9Q0Z7S8 132 aa9.31□□□□□ -0.92
CPNE3-205ENST00000522240 FAM222AQ5U5X8 452 aa9.31□□□□□ -0.92
CPNE3-205ENST00000522240 CFAP126Q5VTH2 177 aa9.31□□□□□ -0.92
CPNE3-205ENST00000522240 UFSP1Q6NVU6 142 aa9.31□□□□□ -0.92
CPNE3-205ENST00000522240 ZFP2Q6ZN57 461 aa9.31□□□□□ -0.92
CPNE3-205ENST00000522240 C14orf178Q8N769 122 aaPredicted RBP9.31□□□□□ -0.92
CPNE3-205ENST00000522240 JPT2Q9H910 190 aa9.31□□□□□ -0.92
CPNE3-205ENST00000522240 A0A087WWL8 130 aa9.3□□□□□ -0.92
CPNE3-205ENST00000522240 GAGE12BA1L429 117 aa9.3□□□□□ -0.92
CPNE3-205ENST00000522240 GAGE7O76087 117 aa9.3□□□□□ -0.92
CPNE3-205ENST00000522240 PPBPP02775 128 aa9.3□□□□□ -0.92
CPNE3-205ENST00000522240 GAGE12FP0CL80 117 aa9.3□□□□□ -0.92
CPNE3-205ENST00000522240 GAGE12GP0CL81 117 aa9.3□□□□□ -0.92
CPNE3-205ENST00000522240 GAGE12IP0CL82 117 aa9.3□□□□□ -0.92
CPNE3-205ENST00000522240 SPART-AS1P0CW21 52 aa9.3□□□□□ -0.92
CPNE3-205ENST00000522240 RAB4AP20338 218 aa9.3□□□□□ -0.92
CPNE3-205ENST00000522240 LINC00315P59091 139 aa9.3□□□□□ -0.92
CPNE3-205ENST00000522240 MRPL51Q4U2R6 128 aaKnown RBP9.3□□□□□ -0.92
CPNE3-205ENST00000522240 MRAP2Q96G30 205 aa9.3□□□□□ -0.92
CPNE3-205ENST00000522240 EDA2RQ9HAV5 297 aa9.3□□□□□ -0.92
CPNE3-205ENST00000522240 AP5S1Q9NUS5 200 aa9.3□□□□□ -0.92
CPNE3-205ENST00000522240 TRGV2A0A075B6R0 118 aa9.29□□□□□ -0.92
CPNE3-205ENST00000522240 MGPP08493 103 aa9.29□□□□□ -0.92
CPNE3-205ENST00000522240 ZNF56Q15929 161 aa9.29□□□□□ -0.92
CPNE3-205ENST00000522240 FAM74A4Q5TZK3 123 aa9.29□□□□□ -0.92
CPNE3-205ENST00000522240 OR4C5Q8NGB2 326 aa9.29□□□□□ -0.92
CPNE3-205ENST00000522240 SAMD10Q9BYL1 202 aa9.29□□□□□ -0.92
CPNE3-205ENST00000522240 C1orf196B1AJZ1 125 aa9.28□□□□□ -0.92
CPNE3-205ENST00000522240 DEFB4AO15263 64 aa9.28□□□□□ -0.92
CPNE3-205ENST00000522240 NHLRC4P0CG21 123 aaPredicted RBP9.28□□□□□ -0.92
CPNE3-205ENST00000522240 DAD1P61803 113 aa9.28□□□□□ -0.92
CPNE3-205ENST00000522240 ORMDL3Q8N138 153 aa9.28□□□□□ -0.92
CPNE3-205ENST00000522240 CELA1Q9UNI1 258 aa9.28□□□□□ -0.92
CPNE3-205ENST00000522240 LAMTOR2Q9Y2Q5 125 aa9.28□□□□□ -0.92
CPNE3-205ENST00000522240 U3KQK5 164 aa9.28□□□□□ -0.92
CPNE3-205ENST00000522240 NACAE9PAV3 2078 aa9.28□□□□□ -0.92
CPNE3-205ENST00000522240 KMT2CQ8NEZ4 4911 aaKnown RBP9.26□□□□□ -0.93
CPNE3-205ENST00000522240 A0A0J9YWU9 116 aa9.26□□□□□ -0.93
CPNE3-205ENST00000522240 D6R8Y8 96 aa9.26□□□□□ -0.93
CPNE3-205ENST00000522240 H7C1H1 209 aa9.26□□□□□ -0.93
CPNE3-205ENST00000522240 PPP1R17O96001 155 aa9.26□□□□□ -0.93
CPNE3-205ENST00000522240 IGHV3-53P01767 116 aa9.26□□□□□ -0.93
CPNE3-205ENST00000522240 DEFB130BP0DP73 79 aa9.26□□□□□ -0.93
CPNE3-205ENST00000522240 DEFB130AP0DP74 79 aa9.26□□□□□ -0.93
CPNE3-205ENST00000522240 SRIP30626 198 aa9.26□□□□□ -0.93
CPNE3-205ENST00000522240 CKS2P33552 79 aa9.26□□□□□ -0.93
CPNE3-205ENST00000522240 RAB5BP61020 215 aa9.26□□□□□ -0.93
CPNE3-205ENST00000522240 KIAA1644Q3SXP7 199 aa9.26□□□□□ -0.93
CPNE3-205ENST00000522240 SUMO4Q6EEV6 95 aa9.26□□□□□ -0.93
CPNE3-205ENST00000522240 ZNF479Q96JC4 524 aa9.26□□□□□ -0.93
CPNE3-205ENST00000522240 ALKBH7Q9BT30 221 aaPredicted RBP9.26□□□□□ -0.93
CPNE3-205ENST00000522240 F5H697 171 aa9.25□□□□□ -0.93
CPNE3-205ENST00000522240 NCR2O95944 276 aa9.25□□□□□ -0.93
CPNE3-205ENST00000522240 GATA1P15976 413 aaPredicted RBP9.25□□□□□ -0.93
CPNE3-205ENST00000522240 PRELID3AQ96N28 172 aa9.25□□□□□ -0.93
CPNE3-205ENST00000522240 COL7A1Q02388 2944 aa9.24□□□□□ -0.93
CPNE3-205ENST00000522240 TRAV26-2A0A0B4J265 109 aa9.24□□□□□ -0.93
CPNE3-205ENST00000522240 SMKR1H3BMG3 65 aa9.24□□□□□ -0.93
CPNE3-205ENST00000522240 M0QY20 66 aa9.24□□□□□ -0.93
CPNE3-205ENST00000522240 ATP5G1P05496 136 aa9.24□□□□□ -0.93
CPNE3-205ENST00000522240 NRACQ8N912 160 aa9.24□□□□□ -0.93
CPNE3-205ENST00000522240 IGHV3-73A0A0B4J1V6 119 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms