RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 OTORQ9NRC9 128 aa6.65□□□□□ -1.34
CTNNA1-234ENST00000522227 PKIAP61925 76 aa6.64□□□□□ -1.35
CTNNA1-234ENST00000522227 NTM-AS1Q6ZSK4 140 aa6.64□□□□□ -1.35
CTNNA1-234ENST00000522227 FER1L6-AS1Q8NA97 138 aa6.64□□□□□ -1.35
CTNNA1-234ENST00000522227 SUN5Q8TC36 379 aa6.64□□□□□ -1.35
CTNNA1-234ENST00000522227 GAGE12HA6NDE8 117 aa6.63□□□□□ -1.35
CTNNA1-234ENST00000522227 NEXN-AS1Q8NBZ9 246 aa6.63□□□□□ -1.35
CTNNA1-234ENST00000522227 DIRC1Q969H9 104 aa6.63□□□□□ -1.35
CTNNA1-234ENST00000522227 OR5AC2Q9NZP5 309 aa6.63□□□□□ -1.35
CTNNA1-234ENST00000522227 IGLV1-50A0A075B6I6 118 aa6.62□□□□□ -1.35
CTNNA1-234ENST00000522227 TRAV1-1A0A0B4J248 108 aa6.62□□□□□ -1.35
CTNNA1-234ENST00000522227 IGKV3D-20A0A0C4DH25 116 aa6.62□□□□□ -1.35
CTNNA1-234ENST00000522227 IGKV3OR2-268A0A0C4DH90 116 aa6.62□□□□□ -1.35
CTNNA1-234ENST00000522227 TRBV10-1A0A0K0K1A3 114 aa6.62□□□□□ -1.35
CTNNA1-234ENST00000522227 IGSF23A1L1A6 192 aa6.62□□□□□ -1.35
CTNNA1-234ENST00000522227 M0R381 172 aa6.62□□□□□ -1.35
CTNNA1-234ENST00000522227 S100A11P31949 105 aa6.62□□□□□ -1.35
CTNNA1-234ENST00000522227 FAM74A1Q5RGS3 127 aa6.62□□□□□ -1.35
CTNNA1-234ENST00000522227 CFAP161Q6P656 301 aa6.62□□□□□ -1.35
CTNNA1-234ENST00000522227 OR11H4Q8NGC9 324 aa6.62□□□□□ -1.35
CTNNA1-234ENST00000522227 SLC25A21Q9BQT8 299 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-234ENST00000522227 LYRM2Q9NU23 88 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-234ENST00000522227 LINC00474Q9P2X8 69 aa6.62□□□□□ -1.35
CTNNA1-234ENST00000522227 FLVCR2Q9UPI3 526 aa6.62□□□□□ -1.35
CTNNA1-234ENST00000522227 TRAV8-4A0A0B4J246 113 aa6.61□□□□□ -1.35
CTNNA1-234ENST00000522227 P01737 135 aa6.61□□□□□ -1.35
CTNNA1-234ENST00000522227 CYCSP99999 105 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-234ENST00000522227 ZFP69Q49AA0 526 aa6.61□□□□□ -1.35
CTNNA1-234ENST00000522227 SMUG1Q53HV7 270 aa6.61□□□□□ -1.35
CTNNA1-234ENST00000522227 PIK3CD-AS1Q5SR53 167 aa6.61□□□□□ -1.35
CTNNA1-234ENST00000522227 TOMM5Q8N4H5 51 aa6.61□□□□□ -1.35
CTNNA1-234ENST00000522227 ARL6IP6Q8N6S5 226 aa6.61□□□□□ -1.35
CTNNA1-234ENST00000522227 C20orf203Q8NBC4 194 aa6.61□□□□□ -1.35
CTNNA1-234ENST00000522227 LINC00526Q96FQ7 95 aa6.61□□□□□ -1.35
CTNNA1-234ENST00000522227 SFRP2Q96HF1 295 aa6.61□□□□□ -1.35
CTNNA1-234ENST00000522227 DERL1Q9BUN8 251 aa6.61□□□□□ -1.35
CTNNA1-234ENST00000522227 CDIP1Q9H305 208 aa6.61□□□□□ -1.35
CTNNA1-234ENST00000522227 MBD2Q9UBB5 411 aa6.61□□□□□ -1.35
CTNNA1-234ENST00000522227 RSL24D1Q9UHA3 163 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-234ENST00000522227 IGLV4-60A0A075B6I1 120 aa6.6□□□□□ -1.35
CTNNA1-234ENST00000522227 GRIFINA4D1Z8 144 aa6.6□□□□□ -1.35
CTNNA1-234ENST00000522227 FAM25EA8MYX2 175 aa6.6□□□□□ -1.35
CTNNA1-234ENST00000522227 H0Y9J4 135 aa6.6□□□□□ -1.35
CTNNA1-234ENST00000522227 ARMS2P0C7Q2 107 aa6.6□□□□□ -1.35
CTNNA1-234ENST00000522227 SULT1A1P50225 295 aa6.6□□□□□ -1.35
CTNNA1-234ENST00000522227 SULT1A2P50226 295 aa6.6□□□□□ -1.35
CTNNA1-234ENST00000522227 RAB2AP61019 212 aa6.6□□□□□ -1.35
CTNNA1-234ENST00000522227 HBG1P69891 147 aa6.6□□□□□ -1.35
CTNNA1-234ENST00000522227 HBG2P69892 147 aa6.6□□□□□ -1.35
CTNNA1-234ENST00000522227 ZNF56Q15929 161 aa6.6□□□□□ -1.35
CTNNA1-234ENST00000522227 PRNTQ86SH4 94 aa6.6□□□□□ -1.35
CTNNA1-234ENST00000522227 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-234ENST00000522227 PSG8Q9UQ74 426 aa6.6□□□□□ -1.35
CTNNA1-234ENST00000522227 PHLDA3Q9Y5J5 127 aa6.6□□□□□ -1.35
CTNNA1-234ENST00000522227 MUC17Q685J3 4493 aa6.59□□□□□ -1.35
CTNNA1-234ENST00000522227 TRBV25-1A0A075B6N4 114 aa6.59□□□□□ -1.35
CTNNA1-234ENST00000522227 A0A087WXM4 84 aa6.59□□□□□ -1.35
CTNNA1-234ENST00000522227 A0A1W2PNN7 141 aa6.59□□□□□ -1.35
CTNNA1-234ENST00000522227 M0R036 132 aa6.59□□□□□ -1.35
CTNNA1-234ENST00000522227 GZMBP10144 247 aa6.59□□□□□ -1.35
CTNNA1-234ENST00000522227 GAGE2BQ13066 116 aa6.59□□□□□ -1.35
CTNNA1-234ENST00000522227 STX12Q86Y82 276 aa6.59□□□□□ -1.35
CTNNA1-234ENST00000522227 TMEM252Q8N6L7 170 aa6.59□□□□□ -1.35
CTNNA1-234ENST00000522227 OR10G8Q8NGN5 311 aa6.59□□□□□ -1.35
CTNNA1-234ENST00000522227 MITD1Q8WV92 249 aa6.59□□□□□ -1.35
CTNNA1-234ENST00000522227 RETNLBQ9BQ08 111 aa6.59□□□□□ -1.35
CTNNA1-234ENST00000522227 IL36BQ9NZH7 164 aa6.59□□□□□ -1.35
CTNNA1-234ENST00000522227 B4DEV8 164 aa6.58□□□□□ -1.36
CTNNA1-234ENST00000522227 IGLV7-43P04211 117 aa6.58□□□□□ -1.36
CTNNA1-234ENST00000522227 KRTAP1-4P0C5Y4 121 aa6.58□□□□□ -1.36
CTNNA1-234ENST00000522227 AMTP48728 403 aa6.58□□□□□ -1.36
CTNNA1-234ENST00000522227 KHDC3LQ587J8 217 aa6.58□□□□□ -1.36
CTNNA1-234ENST00000522227 PRR27Q6MZM9 219 aa6.58□□□□□ -1.36
CTNNA1-234ENST00000522227 PHF5AQ7RTV0 110 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-234ENST00000522227 TRIM63Q969Q1 353 aa6.58□□□□□ -1.36
CTNNA1-234ENST00000522227 TRBV6-1A0A0K0K1D8 114 aa6.57□□□□□ -1.36
CTNNA1-234ENST00000522227 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.57□□□□□ -1.36
CTNNA1-234ENST00000522227 AP3S2P59780 193 aa6.57□□□□□ -1.36
CTNNA1-234ENST00000522227 EIF5AP63241 154 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-234ENST00000522227 ATP6V1FQ16864 119 aa6.57□□□□□ -1.36
CTNNA1-234ENST00000522227 PYDC2Q56P42 97 aa6.57□□□□□ -1.36
CTNNA1-234ENST00000522227 C11orf1Q9H5F2 150 aa6.57□□□□□ -1.36
CTNNA1-234ENST00000522227 TMSB15BA0A087X1C1 80 aa6.56□□□□□ -1.36
CTNNA1-234ENST00000522227 PVALBP20472 110 aaPredicted RBP6.56□□□□□ -1.36
CTNNA1-234ENST00000522227 DEFA3P59666 94 aa6.56□□□□□ -1.36
CTNNA1-234ENST00000522227 CARD19Q96LW7 228 aa6.56□□□□□ -1.36
CTNNA1-234ENST00000522227 GVQW2A0A096LPI5 108 aaPredicted RBP6.55□□□□□ -1.36
CTNNA1-234ENST00000522227 IGHV1-24A0A0C4DH33 117 aa6.55□□□□□ -1.36
CTNNA1-234ENST00000522227 F5H697 171 aa6.55□□□□□ -1.36
CTNNA1-234ENST00000522227 HMGB3O15347 200 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-234ENST00000522227 TPT1P13693 172 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-234ENST00000522227 RPL13AP40429 203 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-234ENST00000522227 PTTG1IPP53801 180 aa6.55□□□□□ -1.36
CTNNA1-234ENST00000522227 TAS2R45P59539 299 aa6.55□□□□□ -1.36
CTNNA1-234ENST00000522227 FLI1Q01543 452 aaPredicted RBP6.55□□□□□ -1.36
CTNNA1-234ENST00000522227 NHLH2Q02577 135 aa6.55□□□□□ -1.36
CTNNA1-234ENST00000522227 SPCS2Q15005 226 aa6.55□□□□□ -1.36
CTNNA1-234ENST00000522227 TMEM97Q5BJF2 176 aa6.55□□□□□ -1.36
CTNNA1-234ENST00000522227 FABP5P3A8MUU1 101 aa6.54□□□□□ -1.36
CTNNA1-234ENST00000522227 K7EQM0 130 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms