RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 HOXA5P20719 270 aa17.02■□□□□ 0.32
PVT1-212ENST00000521951 FHL2Q14192 279 aa17.02■□□□□ 0.32
PVT1-212ENST00000521951 UFSP1Q6NVU6 142 aa17.02■□□□□ 0.32
PVT1-212ENST00000521951 C14orf178Q8N769 122 aaPredicted RBP17.02■□□□□ 0.32
PVT1-212ENST00000521951 IGHV3-73A0A0B4J1V6 119 aa17.01■□□□□ 0.31
PVT1-212ENST00000521951 F5H768 121 aa17.01■□□□□ 0.31
PVT1-212ENST00000521951 FAM74A4Q5TZK3 123 aa17.01■□□□□ 0.31
PVT1-212ENST00000521951 KCNIP4Q6PIL6 250 aa17.01■□□□□ 0.31
PVT1-212ENST00000521951 KIF25-AS1Q9Y6Z4 181 aa17.01■□□□□ 0.31
PVT1-212ENST00000521951 CIDEAO60543 219 aa17.01■□□□□ 0.31
PVT1-212ENST00000521951 EVI2AP22794 236 aa17.01■□□□□ 0.31
PVT1-212ENST00000521951 MRPL54Q6P161 138 aaKnown RBP17.01■□□□□ 0.31
PVT1-212ENST00000521951 ZFP2Q6ZN57 461 aa17.01■□□□□ 0.31
PVT1-212ENST00000521951 TRGV4A0A0C4DH28 118 aa17■□□□□ 0.31
PVT1-212ENST00000521951 ATP6V1G1O75348 118 aa17■□□□□ 0.31
PVT1-212ENST00000521951 URGCP-MRPS24S4R325 110 aa17■□□□□ 0.31
PVT1-212ENST00000521951 RHODO00212 210 aa16.99■□□□□ 0.31
PVT1-212ENST00000521951 SMIM17P0DL12 118 aa16.99■□□□□ 0.31
PVT1-212ENST00000521951 S100PP25815 95 aa16.99■□□□□ 0.31
PVT1-212ENST00000521951 BTF3L4Q96K17 158 aa16.99■□□□□ 0.31
PVT1-212ENST00000521951 MUC7Q8TAX7 377 aa16.98■□□□□ 0.31
PVT1-212ENST00000521951 A0A1B0GXF2 115 aa16.97■□□□□ 0.31
PVT1-212ENST00000521951 CAMPP49913 170 aa16.97■□□□□ 0.31
PVT1-212ENST00000521951 LINC00315P59091 139 aa16.97■□□□□ 0.31
PVT1-212ENST00000521951 SMIM15Q7Z3B0 74 aa16.97■□□□□ 0.31
PVT1-212ENST00000521951 ATP5L2Q7Z4Y8 100 aa16.97■□□□□ 0.31
PVT1-212ENST00000521951 DPH3P1Q9H4G8 78 aa16.97■□□□□ 0.31
PVT1-212ENST00000521951 TRAV9-1A0A075B6T8 112 aa16.96■□□□□ 0.31
PVT1-212ENST00000521951 A0A1B0GW15 77 aa16.96■□□□□ 0.31
PVT1-212ENST00000521951 Q6ZSN1 163 aa16.96■□□□□ 0.31
PVT1-212ENST00000521951 HHLA3Q9XRX5 114 aa16.96■□□□□ 0.31
PVT1-212ENST00000521951 GATA1P15976 413 aaPredicted RBP16.96■□□□□ 0.3
PVT1-212ENST00000521951 HBBP68871 147 aa16.96■□□□□ 0.3
PVT1-212ENST00000521951 TMEM191AQ9H0A3 160 aa16.96■□□□□ 0.3
PVT1-212ENST00000521951 S100A1P23297 94 aa16.95■□□□□ 0.3
PVT1-212ENST00000521951 CEMP1Q6PRD7 247 aaPredicted RBP16.95■□□□□ 0.3
PVT1-212ENST00000521951 PRO0255Q9UI72 69 aa16.95■□□□□ 0.3
PVT1-212ENST00000521951 MGPP08493 103 aa16.94■□□□□ 0.3
PVT1-212ENST00000521951 CRYBA4P53673 196 aa16.94■□□□□ 0.3
PVT1-212ENST00000521951 SLAQ13239 276 aa16.94■□□□□ 0.3
PVT1-212ENST00000521951 TRAV26-1A0A087WT03 109 aa16.93■□□□□ 0.3
PVT1-212ENST00000521951 S100A8P05109 93 aa16.93■□□□□ 0.3
PVT1-212ENST00000521951 ZNF56Q15929 161 aa16.93■□□□□ 0.3
PVT1-212ENST00000521951 ZFAND6Q6FIF0 208 aa16.93■□□□□ 0.3
PVT1-212ENST00000521951 A0A0J9YY99 117 aa16.92■□□□□ 0.3
PVT1-212ENST00000521951 F5H697 171 aa16.92■□□□□ 0.3
PVT1-212ENST00000521951 RAB4BP61018 213 aa16.92■□□□□ 0.3
PVT1-212ENST00000521951 TMEM88Q6PEY1 159 aa16.92■□□□□ 0.3
PVT1-212ENST00000521951 SLC25A29Q8N8R3 303 aa16.92■□□□□ 0.3
PVT1-212ENST00000521951 VSIG2Q96IQ7 327 aa16.92■□□□□ 0.3
PVT1-212ENST00000521951 NUPR2A6NF83 97 aa16.91■□□□□ 0.3
PVT1-212ENST00000521951 PAX4O43316 350 aa16.91■□□□□ 0.3
PVT1-212ENST00000521951 ELOBQ15370 118 aa16.91■□□□□ 0.3
PVT1-212ENST00000521951 CBLN2Q8IUK8 224 aa16.91■□□□□ 0.3
PVT1-212ENST00000521951 SMCO4Q9NRQ5 59 aa16.91■□□□□ 0.3
PVT1-212ENST00000521951 TRBV6-4A0A1B0GX49 114 aa16.91■□□□□ 0.3
PVT1-212ENST00000521951 GATD1Q8NB37 220 aa16.91■□□□□ 0.3
PVT1-212ENST00000521951 IGLL5B9A064 214 aa16.9■□□□□ 0.3
PVT1-212ENST00000521951 FAM210BQ96KR6 192 aa16.9■□□□□ 0.3
PVT1-212ENST00000521951 DYNC2H1Q8NCM8 4307 aaKnown RBP16.9■□□□□ 0.3
PVT1-212ENST00000521951 CSMD3Q7Z407 3707 aa16.89■□□□□ 0.29
PVT1-212ENST00000521951 RASL11AQ6T310 242 aa16.89■□□□□ 0.29
PVT1-212ENST00000521951 AMN1Q8IY45 258 aa16.89■□□□□ 0.29
PVT1-212ENST00000521951 RNF185Q96GF1 192 aa16.89■□□□□ 0.29
PVT1-212ENST00000521951 TGIF2-C20orf24A0A0A6YYL0 155 aa16.88■□□□□ 0.29
PVT1-212ENST00000521951 K7EQD1 137 aa16.88■□□□□ 0.29
PVT1-212ENST00000521951 RAB4AP20338 218 aa16.88■□□□□ 0.29
PVT1-212ENST00000521951 FAM104BQ5XKR9 115 aa16.88■□□□□ 0.29
PVT1-212ENST00000521951 SUMO4Q6EEV6 95 aa16.88■□□□□ 0.29
PVT1-212ENST00000521951 YPEL4Q96NS1 127 aa16.88■□□□□ 0.29
PVT1-212ENST00000521951 KLK5Q9Y337 293 aaPredicted RBP16.88■□□□□ 0.29
PVT1-212ENST00000521951 RHOHQ15669 191 aa16.87■□□□□ 0.29
PVT1-212ENST00000521951 Q9UF83 564 aa16.87■□□□□ 0.29
PVT1-212ENST00000521951 TRBV24-1A0A075B6N3 115 aa16.86■□□□□ 0.29
PVT1-212ENST00000521951 LOC100131303A0A0U1RQF7 123 aa16.86■□□□□ 0.29
PVT1-212ENST00000521951 H3BNG1 76 aa16.86■□□□□ 0.29
PVT1-212ENST00000521951 SCO1O75880 301 aa16.86■□□□□ 0.29
PVT1-212ENST00000521951 P0DMU3 169 aa16.86■□□□□ 0.29
PVT1-212ENST00000521951 FAM231AP0DMU4 169 aa16.86■□□□□ 0.29
PVT1-212ENST00000521951 FAM231CP0DMU5 169 aa16.86■□□□□ 0.29
PVT1-212ENST00000521951 PRADC1Q9BSG0 188 aa16.86■□□□□ 0.29
PVT1-212ENST00000521951 C3orf84H3BNL1 204 aa16.86■□□□□ 0.29
PVT1-212ENST00000521951 GYPEP15421 78 aa16.86■□□□□ 0.29
PVT1-212ENST00000521951 TRAV26-2A0A0B4J265 109 aa16.85■□□□□ 0.29
PVT1-212ENST00000521951 M0QY20 66 aa16.85■□□□□ 0.29
PVT1-212ENST00000521951 TMEM136Q6ZRR5 245 aa16.85■□□□□ 0.29
PVT1-212ENST00000521951 MRPL51Q4U2R6 128 aaKnown RBP16.84■□□□□ 0.29
PVT1-212ENST00000521951 STARD9Q9P2P6 4700 aa16.83■□□□□ 0.29
PVT1-212ENST00000521951 TRBV10-1A0A0K0K1A3 114 aa16.82■□□□□ 0.28
PVT1-212ENST00000521951 H7C1H1 209 aa16.82■□□□□ 0.28
PVT1-212ENST00000521951 NUDT3O95989 172 aa16.82■□□□□ 0.28
PVT1-212ENST00000521951 CASC10Q5T4H9 136 aa16.82■□□□□ 0.28
PVT1-212ENST00000521951 C15orf53Q8NAA6 179 aa16.82■□□□□ 0.28
PVT1-212ENST00000521951 FRZBQ92765 325 aa16.82■□□□□ 0.28
PVT1-212ENST00000521951 COX19Q49B96 90 aa16.81■□□□□ 0.28
PVT1-212ENST00000521951 NEXN-AS1Q8NBZ9 246 aa16.81■□□□□ 0.28
PVT1-212ENST00000521951 MRAP2Q96G30 205 aa16.81■□□□□ 0.28
PVT1-212ENST00000521951 GNB1LQ9BYB4 327 aa16.81■□□□□ 0.28
PVT1-212ENST00000521951 APLNQ9ULZ1 77 aa16.81■□□□□ 0.28
PVT1-212ENST00000521951 ICOSQ9Y6W8 199 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms