RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 GATD1Q8NB37 220 aa9.22□□□□□ -0.93
DENND3-217ENST00000521835 CHD6Q8TD26 2715 aa9.22□□□□□ -0.93
DENND3-217ENST00000521835 F8W1H4 67 aa9.22□□□□□ -0.93
DENND3-217ENST00000521835 C9orf139Q6ZV77 190 aa9.22□□□□□ -0.93
DENND3-217ENST00000521835 GPHB5Q86YW7 130 aa9.22□□□□□ -0.93
DENND3-217ENST00000521835 DPM2O94777 84 aa9.21□□□□□ -0.93
DENND3-217ENST00000521835 SYT8Q8NBV8 401 aa9.21□□□□□ -0.93
DENND3-217ENST00000521835 SCGB3A1Q96QR1 104 aa9.21□□□□□ -0.93
DENND3-217ENST00000521835 CD7P09564 240 aa9.21□□□□□ -0.94
DENND3-217ENST00000521835 PSMG4Q5JS54 123 aa9.21□□□□□ -0.94
DENND3-217ENST00000521835 Q8N8P6 123 aa9.21□□□□□ -0.94
DENND3-217ENST00000521835 TRAV25A0A0B4J276 109 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 CHAC1Q9BUX1 264 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 KLK9Q9UKQ9 250 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 TRAV21A0A0B4J279 112 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 MSMBP08118 114 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 ZFAND2AQ8N6M9 145 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 ZNF256Q9Y2P7 627 aaPredicted RBP9.2□□□□□ -0.94
DENND3-217ENST00000521835 GAGE12JA6NER3 117 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 FAM223BA6NKX1 122 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 GAGE7O76087 117 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 TGFAP01135 160 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 GAGE12FP0CL80 117 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 GAGE12GP0CL81 117 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 GAGE12IP0CL82 117 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 GAGE4Q13068 117 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 C9orf47Q6ZRZ4 202 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 FAM223AQ8IWN6 122 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 NRACQ8N912 160 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 TM2D2Q9BX73 214 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 CDIP1Q9H305 208 aa9.2□□□□□ -0.94
DENND3-217ENST00000521835 Q6ZUT4 128 aa9.19□□□□□ -0.94
DENND3-217ENST00000521835 C10orf105Q8TEF2 133 aa9.19□□□□□ -0.94
DENND3-217ENST00000521835 NIPBLQ6KC79 2804 aaeCLIP9.19□□□□□ -0.94
DENND3-217ENST00000521835 A0A087WX48 190 aa9.19□□□□□ -0.94
DENND3-217ENST00000521835 RBAKDNA6NC62 111 aa9.19□□□□□ -0.94
DENND3-217ENST00000521835 MAPKAPK5-AS1Q8N8E1 139 aa9.19□□□□□ -0.94
DENND3-217ENST00000521835 DUX3Q96PT4 197 aa9.19□□□□□ -0.94
DENND3-217ENST00000521835 XGP55808 180 aa9.18□□□□□ -0.94
DENND3-217ENST00000521835 DEFB136Q30KP8 78 aa9.18□□□□□ -0.94
DENND3-217ENST00000521835 SMIM2Q9BVW6 85 aa9.18□□□□□ -0.94
DENND3-217ENST00000521835 TRBV25-1A0A075B6N4 114 aa9.18□□□□□ -0.94
DENND3-217ENST00000521835 IGHV3-73A0A0B4J1V6 119 aa9.18□□□□□ -0.94
DENND3-217ENST00000521835 SYNJ2BPP57105 145 aa9.18□□□□□ -0.94
DENND3-217ENST00000521835 SUMO2P61956 95 aaKnown RBP9.18□□□□□ -0.94
DENND3-217ENST00000521835 DEFB112Q30KQ8 113 aa9.18□□□□□ -0.94
DENND3-217ENST00000521835 ZFAND6Q6FIF0 208 aa9.18□□□□□ -0.94
DENND3-217ENST00000521835 FAM159AQ6UWV7 190 aa9.18□□□□□ -0.94
DENND3-217ENST00000521835 HIST1H4GQ99525 98 aa9.18□□□□□ -0.94
DENND3-217ENST00000521835 MUC4Q99102 2169 aa9.18□□□□□ -0.94
DENND3-217ENST00000521835 NDUFA4O00483 81 aa9.18□□□□□ -0.94
DENND3-217ENST00000521835 PRM2P04554 102 aa9.18□□□□□ -0.94
DENND3-217ENST00000521835 SMIM13P0DJ93 91 aa9.18□□□□□ -0.94
DENND3-217ENST00000521835 SRSF1Q07955 248 aaKnown RBP eCLIP9.18□□□□□ -0.94
DENND3-217ENST00000521835 SPINK13Q1W4C9 94 aa9.18□□□□□ -0.94
DENND3-217ENST00000521835 PTH2Q96A98 100 aa9.18□□□□□ -0.94
DENND3-217ENST00000521835 CNFNQ9BYD5 112 aa9.18□□□□□ -0.94
DENND3-217ENST00000521835 DAZ1Q9NQZ3 744 aaKnown RBP9.18□□□□□ -0.94
DENND3-217ENST00000521835 CCDC179H3BU77 68 aa9.17□□□□□ -0.94
DENND3-217ENST00000521835 COX8CQ7Z4L0 72 aa9.17□□□□□ -0.94
DENND3-217ENST00000521835 RASL10AQ92737 203 aa9.17□□□□□ -0.94
DENND3-217ENST00000521835 HHLA3Q9XRX5 114 aa9.17□□□□□ -0.94
DENND3-217ENST00000521835 ATP5LO75964 103 aa9.17□□□□□ -0.94
DENND3-217ENST00000521835 TEX29Q8N6K0 151 aa9.17□□□□□ -0.94
DENND3-217ENST00000521835 C11orf44Q8N8P7 122 aa9.17□□□□□ -0.94
DENND3-217ENST00000521835 OR9G4Q8NGQ1 327 aa9.17□□□□□ -0.94
DENND3-217ENST00000521835 CSDC2Q9Y534 153 aaKnown RBP9.17□□□□□ -0.94
DENND3-217ENST00000521835 RPL39P62891 51 aaKnown RBP9.16□□□□□ -0.94
DENND3-217ENST00000521835 IGHV3-64A0A075B6Q5 118 aa9.16□□□□□ -0.94
DENND3-217ENST00000521835 NHLRC4P0CG21 123 aaPredicted RBP9.16□□□□□ -0.94
DENND3-217ENST00000521835 ZNF56Q15929 161 aa9.16□□□□□ -0.94
DENND3-217ENST00000521835 C2orf66Q6UXQ4 117 aa9.16□□□□□ -0.94
DENND3-217ENST00000521835 SCGB1D4Q6XE38 83 aa9.16□□□□□ -0.94
DENND3-217ENST00000521835 TMEM190Q8WZ59 177 aa9.16□□□□□ -0.94
DENND3-217ENST00000521835 DPH3P1Q9H4G8 78 aa9.16□□□□□ -0.94
DENND3-217ENST00000521835 PRORYQ9H606 182 aa9.16□□□□□ -0.94
DENND3-217ENST00000521835 U3KQE9 123 aa9.16□□□□□ -0.94
DENND3-217ENST00000521835 FLNAP21333 2647 aaKnown RBP9.16□□□□□ -0.94
DENND3-217ENST00000521835 PRSS29PA6NIE9 313 aa9.16□□□□□ -0.94
DENND3-217ENST00000521835 IGHG2P01859 326 aa9.16□□□□□ -0.94
DENND3-217ENST00000521835 BEX4Q9NWD9 120 aaPredicted RBP9.16□□□□□ -0.94
DENND3-217ENST00000521835 FN1P02751 2386 aaKnown RBP9.15□□□□□ -0.94
DENND3-217ENST00000521835 IGLV2-18A0A075B6J9 118 aa9.15□□□□□ -0.94
DENND3-217ENST00000521835 DUSP14O95147 198 aaKnown RBP9.15□□□□□ -0.94
DENND3-217ENST00000521835 AMTNQ6UX39 209 aa9.15□□□□□ -0.94
DENND3-217ENST00000521835 OVOL1O14753 267 aa9.15□□□□□ -0.95
DENND3-217ENST00000521835 APOMO95445 188 aa9.15□□□□□ -0.95
DENND3-217ENST00000521835 FASNP49327 2511 aaKnown RBP9.15□□□□□ -0.95
DENND3-217ENST00000521835 NBPF19A0A087WUL8 3843 aa9.14□□□□□ -0.95
DENND3-217ENST00000521835 A6NDX4 124 aa9.14□□□□□ -0.95
DENND3-217ENST00000521835 H3BMG7 143 aa9.14□□□□□ -0.95
DENND3-217ENST00000521835 A0A1B0GWB2 263 aa9.14□□□□□ -0.95
DENND3-217ENST00000521835 RNF223E7ERA6 249 aa9.14□□□□□ -0.95
DENND3-217ENST00000521835 RNASE3P12724 160 aaKnown RBP9.14□□□□□ -0.95
DENND3-217ENST00000521835 KLHL30-AS1Q8NEE0 82 aa9.14□□□□□ -0.95
DENND3-217ENST00000521835 GAGE13Q4V321 117 aa9.14□□□□□ -0.95
DENND3-217ENST00000521835 MDFICQ9P1T7 246 aa9.14□□□□□ -0.95
DENND3-217ENST00000521835 OPRPNQ99935 248 aaPredicted RBP9.13□□□□□ -0.95
DENND3-217ENST00000521835 TP53TG1Q9Y2A0 90 aa9.13□□□□□ -0.95
DENND3-217ENST00000521835 B4DSR2 109 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms