RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 LINC00315P59091 139 aa13.58□□□□□ -0.24
TRAPPC9-210ENST00000521667 CLUHP3Q96NS8 147 aa13.58□□□□□ -0.24
TRAPPC9-210ENST00000521667 JPT2Q9H910 190 aa13.58□□□□□ -0.24
TRAPPC9-210ENST00000521667 KRTAP10-3P60369 221 aa13.57□□□□□ -0.24
TRAPPC9-210ENST00000521667 MAJINQ3KP22 176 aa13.57□□□□□ -0.24
TRAPPC9-210ENST00000521667 LINC01545Q5VT33 79 aa13.57□□□□□ -0.24
TRAPPC9-210ENST00000521667 C20orf78Q9BR46 151 aa13.57□□□□□ -0.24
TRAPPC9-210ENST00000521667 MIEN1Q9BRT3 115 aa13.57□□□□□ -0.24
TRAPPC9-210ENST00000521667 OR11H12B2RN74 326 aa13.57□□□□□ -0.24
TRAPPC9-210ENST00000521667 LBHQ53QV2 105 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-210ENST00000521667 NDUFA11Q86Y39 141 aa13.57□□□□□ -0.24
TRAPPC9-210ENST00000521667 SMIM2Q9BVW6 85 aa13.57□□□□□ -0.24
TRAPPC9-210ENST00000521667 NIPBLQ6KC79 2804 aaeCLIP13.56□□□□□ -0.24
TRAPPC9-210ENST00000521667 PPP1R17O96001 155 aa13.56□□□□□ -0.24
TRAPPC9-210ENST00000521667 SUMO2P61956 95 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-210ENST00000521667 RPL39LQ96EH5 51 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-210ENST00000521667 MCRIP2Q9BUT9 160 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-210ENST00000521667 MUC4Q99102 2169 aa13.56□□□□□ -0.24
TRAPPC9-210ENST00000521667 A0A087WWL8 130 aa13.56□□□□□ -0.24
TRAPPC9-210ENST00000521667 LAGE3Q14657 143 aa13.56□□□□□ -0.24
TRAPPC9-210ENST00000521667 IFI27L1Q96BM0 104 aa13.56□□□□□ -0.24
TRAPPC9-210ENST00000521667 SORL1Q92673 2214 aa13.55□□□□□ -0.24
TRAPPC9-210ENST00000521667 IGLV1-51P01701 117 aa13.55□□□□□ -0.24
TRAPPC9-210ENST00000521667 STHQ8IWL8 128 aa13.55□□□□□ -0.24
TRAPPC9-210ENST00000521667 TMEM158Q8WZ71 300 aa13.55□□□□□ -0.24
TRAPPC9-210ENST00000521667 TCAPO15273 167 aa13.54□□□□□ -0.24
TRAPPC9-210ENST00000521667 HTN1P15515 57 aa13.54□□□□□ -0.24
TRAPPC9-210ENST00000521667 INSP01308 110 aa13.54□□□□□ -0.24
TRAPPC9-210ENST00000521667 CMC4P56277 68 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC9-210ENST00000521667 IGLC3P0DOY3 106 aa13.53□□□□□ -0.24
TRAPPC9-210ENST00000521667 IGLL1P15814 213 aa13.53□□□□□ -0.24
TRAPPC9-210ENST00000521667 ZNF876PQ49A33 203 aa13.53□□□□□ -0.24
TRAPPC9-210ENST00000521667 SUMO4Q6EEV6 95 aa13.53□□□□□ -0.24
TRAPPC9-210ENST00000521667 PMCHL2Q9BQD1 86 aa13.53□□□□□ -0.24
TRAPPC9-210ENST00000521667 C2orf88Q9BSF0 95 aa13.53□□□□□ -0.24
TRAPPC9-210ENST00000521667 TRPT1Q86TN4 253 aaKnown RBP13.52□□□□□ -0.24
TRAPPC9-210ENST00000521667 LINC00467Q9BRT7 94 aa13.52□□□□□ -0.24
TRAPPC9-210ENST00000521667 F5H697 171 aa13.52□□□□□ -0.25
TRAPPC9-210ENST00000521667 LGALS9BQ3B8N2 356 aa13.52□□□□□ -0.25
TRAPPC9-210ENST00000521667 FAM74A4Q5TZK3 123 aa13.52□□□□□ -0.25
TRAPPC9-210ENST00000521667 LGALS9CQ6DKI2 356 aa13.52□□□□□ -0.25
TRAPPC9-210ENST00000521667 C18orf15Q96N68 181 aa13.52□□□□□ -0.25
TRAPPC9-210ENST00000521667 UQCR10Q9UDW1 63 aa13.52□□□□□ -0.25
TRAPPC9-210ENST00000521667 CRYGDP07320 174 aa13.51□□□□□ -0.25
TRAPPC9-210ENST00000521667 LINC01587Q99440 93 aa13.51□□□□□ -0.25
TRAPPC9-210ENST00000521667 hDV102S1A0JD36 115 aa13.51□□□□□ -0.25
TRAPPC9-210ENST00000521667 K7EMI3 77 aa13.51□□□□□ -0.25
TRAPPC9-210ENST00000521667 ORMDL2Q53FV1 153 aa13.51□□□□□ -0.25
TRAPPC9-210ENST00000521667 C2CD3Q4AC94 2353 aa13.5□□□□□ -0.25
TRAPPC9-210ENST00000521667 HSBP1L1C9JCN9 74 aa13.5□□□□□ -0.25
TRAPPC9-210ENST00000521667 PF4P02776 101 aa13.5□□□□□ -0.25
TRAPPC9-210ENST00000521667 ZNF415Q09FC8 603 aa13.5□□□□□ -0.25
TRAPPC9-210ENST00000521667 NUDT3O95989 172 aa13.49□□□□□ -0.25
TRAPPC9-210ENST00000521667 FAM110AQ9BQ89 295 aa13.49□□□□□ -0.25
TRAPPC9-210ENST00000521667 CSTL1Q9H114 145 aa13.49□□□□□ -0.25
TRAPPC9-210ENST00000521667 ST20Q9HBF5 79 aa13.49□□□□□ -0.25
TRAPPC9-210ENST00000521667 XCL2Q9UBD3 114 aa13.49□□□□□ -0.25
TRAPPC9-210ENST00000521667 A0A1B0GV90 55 aa13.49□□□□□ -0.25
TRAPPC9-210ENST00000521667 PRM2P04554 102 aa13.49□□□□□ -0.25
TRAPPC9-210ENST00000521667 RPL32P62910 135 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-210ENST00000521667 ZNF56Q15929 161 aa13.49□□□□□ -0.25
TRAPPC9-210ENST00000521667 BEAN1Q3B7T3 259 aa13.49□□□□□ -0.25
TRAPPC9-210ENST00000521667 GOLT1BQ9Y3E0 138 aa13.49□□□□□ -0.25
TRAPPC9-210ENST00000521667 ATP5LO75964 103 aa13.48□□□□□ -0.25
TRAPPC9-210ENST00000521667 NUTF2P61970 127 aaKnown RBP13.48□□□□□ -0.25
TRAPPC9-210ENST00000521667 TEP1Q99973 2627 aaKnown RBP13.48□□□□□ -0.25
TRAPPC9-210ENST00000521667 LINC00482Q8N8I6 264 aa13.47□□□□□ -0.25
TRAPPC9-210ENST00000521667 M0R2P5 195 aa13.47□□□□□ -0.25
TRAPPC9-210ENST00000521667 WNK1Q9H4A3 2382 aa13.46□□□□□ -0.25
TRAPPC9-210ENST00000521667 M0QY20 66 aa13.46□□□□□ -0.25
TRAPPC9-210ENST00000521667 PIK3CD-AS1Q5SR53 167 aa13.46□□□□□ -0.25
TRAPPC9-210ENST00000521667 C11orf72Q8NBR9 251 aa13.46□□□□□ -0.25
TRAPPC9-210ENST00000521667 PTH2Q96A98 100 aa13.46□□□□□ -0.25
TRAPPC9-210ENST00000521667 TMEM208Q9BTX3 173 aa13.46□□□□□ -0.25
TRAPPC9-210ENST00000521667 TRBV6-5A0A0K0K1A5 114 aa13.46□□□□□ -0.26
TRAPPC9-210ENST00000521667 PRSS1P07477 247 aa13.46□□□□□ -0.26
TRAPPC9-210ENST00000521667 POLR2KP53803 58 aaKnown RBP13.46□□□□□ -0.26
TRAPPC9-210ENST00000521667 Q6ZN92 141 aa13.46□□□□□ -0.26
TRAPPC9-210ENST00000521667 C19orf73Q9NVV2 129 aa13.46□□□□□ -0.26
TRAPPC9-210ENST00000521667 C1orf158Q8N1D5 194 aa13.45□□□□□ -0.26
TRAPPC9-210ENST00000521667 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC9-210ENST00000521667 NEGR1Q7Z3B1 354 aa13.44□□□□□ -0.26
TRAPPC9-210ENST00000521667 TOMM6Q96B49 74 aa13.44□□□□□ -0.26
TRAPPC9-210ENST00000521667 SPXQ9BT56 116 aa13.44□□□□□ -0.26
TRAPPC9-210ENST00000521667 JMJD1CQ15652 2540 aa13.44□□□□□ -0.26
TRAPPC9-210ENST00000521667 M0R143 59 aa13.44□□□□□ -0.26
TRAPPC9-210ENST00000521667 VCYO14598 125 aa13.44□□□□□ -0.26
TRAPPC9-210ENST00000521667 MORN3Q6PF18 240 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC9-210ENST00000521667 MRPL52Q86TS9 123 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-210ENST00000521667 SNHG12Q9BXW3 62 aa13.44□□□□□ -0.26
TRAPPC9-210ENST00000521667 WFDC10AQ9H1F0 79 aa13.44□□□□□ -0.26
TRAPPC9-210ENST00000521667 TENM1Q9UKZ4 2725 aa13.43□□□□□ -0.26
TRAPPC9-210ENST00000521667 SDHAF1A6NFY7 115 aa13.43□□□□□ -0.26
TRAPPC9-210ENST00000521667 A8MWV9 139 aa13.43□□□□□ -0.26
TRAPPC9-210ENST00000521667 EREGO14944 169 aa13.43□□□□□ -0.26
TRAPPC9-210ENST00000521667 HNRNPA3P51991 378 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-210ENST00000521667 ODF1Q14990 250 aa13.43□□□□□ -0.26
TRAPPC9-210ENST00000521667 DKK2Q9UBU2 259 aa13.43□□□□□ -0.26
TRAPPC9-210ENST00000521667 IGHV3OR16-12A0A075B7B8 117 aa13.42□□□□□ -0.26
TRAPPC9-210ENST00000521667 TRBV27A0A0K0K1C4 114 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms