RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 TRAV41A0A0B4J266 112 aa9.74□□□□□ -0.85
TRAPPC9-208ENST00000520857 VCYO14598 125 aa9.74□□□□□ -0.85
TRAPPC9-208ENST00000520857 VCX2Q9H322 139 aa9.74□□□□□ -0.85
TRAPPC9-208ENST00000520857 TCF15Q12870 199 aa9.73□□□□□ -0.85
TRAPPC9-208ENST00000520857 FOXC1Q12948 553 aa9.73□□□□□ -0.85
TRAPPC9-208ENST00000520857 PRSS47A8MTI9 375 aa9.73□□□□□ -0.85
TRAPPC9-208ENST00000520857 CFC1BP0CG36 223 aa9.73□□□□□ -0.85
TRAPPC9-208ENST00000520857 CFC1P0CG37 223 aa9.73□□□□□ -0.85
TRAPPC9-208ENST00000520857 UNQ9165/PRO28630Q6UXU0 137 aa9.73□□□□□ -0.85
TRAPPC9-208ENST00000520857 UBE2D1P51668 147 aa9.72□□□□□ -0.85
TRAPPC9-208ENST00000520857 CARD19Q96LW7 228 aa9.72□□□□□ -0.85
TRAPPC9-208ENST00000520857 TRBV12-3P01733 135 aa9.72□□□□□ -0.85
TRAPPC9-208ENST00000520857 GATA3P23771 443 aa9.72□□□□□ -0.85
TRAPPC9-208ENST00000520857 PSMG3-AS1Q96PY0 264 aa9.72□□□□□ -0.85
TRAPPC9-208ENST00000520857 BRD3OSQ6XYD6 125 aa9.71□□□□□ -0.85
TRAPPC9-208ENST00000520857 ZFAND2AQ8N6M9 145 aa9.71□□□□□ -0.85
TRAPPC9-208ENST00000520857 MRPL53Q96EL3 112 aaKnown RBP9.71□□□□□ -0.85
TRAPPC9-208ENST00000520857 SPXQ9BT56 116 aa9.71□□□□□ -0.86
TRAPPC9-208ENST00000520857 SUMO4Q6EEV6 95 aa9.7□□□□□ -0.86
TRAPPC9-208ENST00000520857 FHL3Q13643 280 aa9.7□□□□□ -0.86
TRAPPC9-208ENST00000520857 Q8N6K4 173 aa9.7□□□□□ -0.86
TRAPPC9-208ENST00000520857 RHPN1-AS1Q9BWJ2 59 aa9.7□□□□□ -0.86
TRAPPC9-208ENST00000520857 IGHV4-4A0A075B6R2 117 aa9.69□□□□□ -0.86
TRAPPC9-208ENST00000520857 LINC01619G3V211 115 aa9.69□□□□□ -0.86
TRAPPC9-208ENST00000520857 TSPEAR-AS2P59090 65 aa9.69□□□□□ -0.86
TRAPPC9-208ENST00000520857 TRAV12-2A0A075B6T6 113 aa9.69□□□□□ -0.86
TRAPPC9-208ENST00000520857 TRAV8-4A0A0B4J246 113 aa9.69□□□□□ -0.86
TRAPPC9-208ENST00000520857 CRIP2P52943 208 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC9-208ENST00000520857 MUSTN1Q8IVN3 82 aa9.69□□□□□ -0.86
TRAPPC9-208ENST00000520857 NCOR2Q9Y618 2525 aa9.69□□□□□ -0.86
TRAPPC9-208ENST00000520857 SPENQ96T58 3664 aaKnown RBP9.69□□□□□ -0.86
TRAPPC9-208ENST00000520857 IGHV3-73A0A0B4J1V6 119 aa9.69□□□□□ -0.86
TRAPPC9-208ENST00000520857 UBE2D3P61077 147 aa9.69□□□□□ -0.86
TRAPPC9-208ENST00000520857 UBE2D2P62837 147 aa9.69□□□□□ -0.86
TRAPPC9-208ENST00000520857 UBE2E1P51965 193 aa9.68□□□□□ -0.86
TRAPPC9-208ENST00000520857 LENEPQ9Y5L5 61 aa9.68□□□□□ -0.86
TRAPPC9-208ENST00000520857 IGHV3-30P01768 117 aa9.68□□□□□ -0.86
TRAPPC9-208ENST00000520857 IGHV3-30-5P0DP03 117 aa9.68□□□□□ -0.86
TRAPPC9-208ENST00000520857 GAGE5Q13069 117 aa9.68□□□□□ -0.86
TRAPPC9-208ENST00000520857 GAGE6Q13070 117 aa9.68□□□□□ -0.86
TRAPPC9-208ENST00000520857 RNASE13Q5GAN3 156 aaKnown RBP9.68□□□□□ -0.86
TRAPPC9-208ENST00000520857 SLC25A29Q8N8R3 303 aa9.68□□□□□ -0.86
TRAPPC9-208ENST00000520857 CENPVL3A0A0U1RRI6 287 aa9.68□□□□□ -0.86
TRAPPC9-208ENST00000520857 NPFFO15130 113 aa9.68□□□□□ -0.86
TRAPPC9-208ENST00000520857 ZNF876PQ49A33 203 aa9.68□□□□□ -0.86
TRAPPC9-208ENST00000520857 TMEM141Q96I45 108 aa9.68□□□□□ -0.86
TRAPPC9-208ENST00000520857 A0A0J9YXV3 536 aa9.67□□□□□ -0.86
TRAPPC9-208ENST00000520857 COX6CP09669 75 aa9.67□□□□□ -0.86
TRAPPC9-208ENST00000520857 ATXN8Q156A1 80 aa9.67□□□□□ -0.86
TRAPPC9-208ENST00000520857 C2orf82Q6UX34 121 aa9.67□□□□□ -0.86
TRAPPC9-208ENST00000520857 IGHV1-69DA0A0B4J2H0 117 aa9.67□□□□□ -0.86
TRAPPC9-208ENST00000520857 CRYGDP07320 174 aa9.67□□□□□ -0.86
TRAPPC9-208ENST00000520857 RNASE3P12724 160 aaKnown RBP9.67□□□□□ -0.86
TRAPPC9-208ENST00000520857 ID1P41134 155 aa9.67□□□□□ -0.86
TRAPPC9-208ENST00000520857 BPESC1Q9GZL8 116 aa9.67□□□□□ -0.86
TRAPPC9-208ENST00000520857 ZNRF2Q8NHG8 242 aa9.67□□□□□ -0.86
TRAPPC9-208ENST00000520857 KLK9Q9UKQ9 250 aa9.67□□□□□ -0.86
TRAPPC9-208ENST00000520857 ASH1LQ9NR48 2969 aaKnown RBP9.66□□□□□ -0.86
TRAPPC9-208ENST00000520857 HIVEP3Q5T1R4 2406 aa9.66□□□□□ -0.86
TRAPPC9-208ENST00000520857 IGLV4-69A0A075B6H9 119 aa9.66□□□□□ -0.86
TRAPPC9-208ENST00000520857 COX6B1P14854 86 aa9.66□□□□□ -0.86
TRAPPC9-208ENST00000520857 EBI3Q14213 229 aa9.66□□□□□ -0.86
TRAPPC9-208ENST00000520857 A0A0U1RRA0 63 aa9.66□□□□□ -0.86
TRAPPC9-208ENST00000520857 MOB4Q9Y3A3 225 aa9.66□□□□□ -0.86
TRAPPC9-208ENST00000520857 CD28P10747 220 aa9.66□□□□□ -0.86
TRAPPC9-208ENST00000520857 TEX49A0A1B0GTD5 131 aa9.65□□□□□ -0.86
TRAPPC9-208ENST00000520857 TSHBP01222 138 aa9.65□□□□□ -0.86
TRAPPC9-208ENST00000520857 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC9-208ENST00000520857 GPHB5Q86YW7 130 aa9.65□□□□□ -0.86
TRAPPC9-208ENST00000520857 C15orf53Q8NAA6 179 aa9.65□□□□□ -0.86
TRAPPC9-208ENST00000520857 LINC01620Q4KN68 170 aa9.64□□□□□ -0.87
TRAPPC9-208ENST00000520857 Q8N1Y9 231 aa9.64□□□□□ -0.87
TRAPPC9-208ENST00000520857 TRAV4A0A0B4J268 109 aa9.64□□□□□ -0.87
TRAPPC9-208ENST00000520857 CDSNQ15517 529 aa9.64□□□□□ -0.87
TRAPPC9-208ENST00000520857 SIRPDQ9H106 197 aa9.64□□□□□ -0.87
TRAPPC9-208ENST00000520857 IGHV3-33P01772 117 aa9.64□□□□□ -0.87
TRAPPC9-208ENST00000520857 MYO9AB2RTY4 2548 aa9.64□□□□□ -0.87
TRAPPC9-208ENST00000520857 WNK1Q9H4A3 2382 aa9.63□□□□□ -0.87
TRAPPC9-208ENST00000520857 IGIPA6NJ69 53 aa9.63□□□□□ -0.87
TRAPPC9-208ENST00000520857 FAM223BA6NKX1 122 aa9.63□□□□□ -0.87
TRAPPC9-208ENST00000520857 H3BMM0 161 aa9.63□□□□□ -0.87
TRAPPC9-208ENST00000520857 IGF2-ASQ6U949 168 aa9.63□□□□□ -0.87
TRAPPC9-208ENST00000520857 FAM223AQ8IWN6 122 aa9.63□□□□□ -0.87
TRAPPC9-208ENST00000520857 C5orf56Q8N8D9 126 aa9.63□□□□□ -0.87
TRAPPC9-208ENST00000520857 UBE2WQ96B02 151 aa9.63□□□□□ -0.87
TRAPPC9-208ENST00000520857 ZNF292O60281 2723 aa9.63□□□□□ -0.87
TRAPPC9-208ENST00000520857 USP9YO00507 2555 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC9-208ENST00000520857 NDUFA4O00483 81 aa9.63□□□□□ -0.87
TRAPPC9-208ENST00000520857 TIMM17AQ99595 171 aa9.63□□□□□ -0.87
TRAPPC9-208ENST00000520857 TIMM21Q9BVV7 248 aa9.63□□□□□ -0.87
TRAPPC9-208ENST00000520857 IFITM1P13164 125 aa9.63□□□□□ -0.87
TRAPPC9-208ENST00000520857 SPINK13Q1W4C9 94 aa9.63□□□□□ -0.87
TRAPPC9-208ENST00000520857 GAGE12JA6NER3 117 aa9.62□□□□□ -0.87
TRAPPC9-208ENST00000520857 M0R2P5 195 aa9.62□□□□□ -0.87
TRAPPC9-208ENST00000520857 GAGE7O76087 117 aa9.62□□□□□ -0.87
TRAPPC9-208ENST00000520857 GAGE12FP0CL80 117 aa9.62□□□□□ -0.87
TRAPPC9-208ENST00000520857 GAGE12GP0CL81 117 aa9.62□□□□□ -0.87
TRAPPC9-208ENST00000520857 GAGE12IP0CL82 117 aa9.62□□□□□ -0.87
TRAPPC9-208ENST00000520857 GAGE4Q13068 117 aa9.62□□□□□ -0.87
TRAPPC9-208ENST00000520857 ITLN2Q8WWU7 325 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms