RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 H7C2G1 150 aa7.65□□□□□ -1.18
MCF2-209ENST00000520602 BVES-AS1Q5T3Y7 98 aa7.65□□□□□ -1.18
MCF2-209ENST00000520602 FOXI2Q6ZQN5 318 aa7.65□□□□□ -1.18
MCF2-209ENST00000520602 PHLDA1Q8WV24 401 aaPredicted RBP7.65□□□□□ -1.18
MCF2-209ENST00000520602 A0A0J9YX75 114 aa7.65□□□□□ -1.19
MCF2-209ENST00000520602 SEC11AP67812 179 aa7.65□□□□□ -1.19
MCF2-209ENST00000520602 SCRT2Q9NQ03 307 aa7.65□□□□□ -1.19
MCF2-209ENST00000520602 LOC107984156A0A0G2JMH3 177 aa7.64□□□□□ -1.19
MCF2-209ENST00000520602 ZNF124Q15973 351 aa7.64□□□□□ -1.19
MCF2-209ENST00000520602 ARL17AQ8IVW1 177 aa7.64□□□□□ -1.19
MCF2-209ENST00000520602 GATD1Q8NB37 220 aa7.64□□□□□ -1.19
MCF2-209ENST00000520602 C20orf78Q9BR46 151 aa7.64□□□□□ -1.19
MCF2-209ENST00000520602 USP24Q9UPU5 2620 aa7.64□□□□□ -1.19
MCF2-209ENST00000520602 TRGV2A0A075B6R0 118 aa7.64□□□□□ -1.19
MCF2-209ENST00000520602 IGKV3OR2-268A0A0C4DH90 116 aa7.64□□□□□ -1.19
MCF2-209ENST00000520602 ZNF415Q09FC8 603 aa7.64□□□□□ -1.19
MCF2-209ENST00000520602 AGRNO00468 2067 aa7.64□□□□□ -1.19
MCF2-209ENST00000520602 APOMO95445 188 aa7.64□□□□□ -1.19
MCF2-209ENST00000520602 SUMO4Q6EEV6 95 aa7.64□□□□□ -1.19
MCF2-209ENST00000520602 DLX4Q92988 240 aaPredicted RBP7.64□□□□□ -1.19
MCF2-209ENST00000520602 INSP01308 110 aa7.63□□□□□ -1.19
MCF2-209ENST00000520602 CHAC1Q9BUX1 264 aa7.63□□□□□ -1.19
MCF2-209ENST00000520602 GEMIN7Q9H840 131 aaKnown RBP7.63□□□□□ -1.19
MCF2-209ENST00000520602 U3KQK5 164 aa7.63□□□□□ -1.19
MCF2-209ENST00000520602 CFAP46Q8IYW2 2715 aa7.63□□□□□ -1.19
MCF2-209ENST00000520602 CD28P10747 220 aa7.63□□□□□ -1.19
MCF2-209ENST00000520602 RIPPLY3P57055 190 aa7.63□□□□□ -1.19
MCF2-209ENST00000520602 PAPPA-AS1Q5QFB9 102 aa7.63□□□□□ -1.19
MCF2-209ENST00000520602 ASH1LQ9NR48 2969 aaKnown RBP7.63□□□□□ -1.19
MCF2-209ENST00000520602 F8VRH5 84 aa7.63□□□□□ -1.19
MCF2-209ENST00000520602 K7EQG2 157 aa7.63□□□□□ -1.19
MCF2-209ENST00000520602 CCL24O00175 119 aa7.63□□□□□ -1.19
MCF2-209ENST00000520602 CRXO43186 299 aaPredicted RBP7.63□□□□□ -1.19
MCF2-209ENST00000520602 CRIP2P52943 208 aaPredicted RBP7.63□□□□□ -1.19
MCF2-209ENST00000520602 ZNF702PQ9H963 129 aa7.63□□□□□ -1.19
MCF2-209ENST00000520602 SPCS1Q9Y6A9 102 aa7.63□□□□□ -1.19
MCF2-209ENST00000520602 TMEM89A2RUT3 159 aa7.62□□□□□ -1.19
MCF2-209ENST00000520602 A0A087WX48 190 aa7.62□□□□□ -1.19
MCF2-209ENST00000520602 IGHV3-38A0A0C4DH36 116 aa7.62□□□□□ -1.19
MCF2-209ENST00000520602 PRSS29PA6NIE9 313 aa7.62□□□□□ -1.19
MCF2-209ENST00000520602 PSMB2P49721 201 aa7.62□□□□□ -1.19
MCF2-209ENST00000520602 UBE2V1Q13404 147 aa7.62□□□□□ -1.19
MCF2-209ENST00000520602 TRPT1Q86TN4 253 aaKnown RBP7.62□□□□□ -1.19
MCF2-209ENST00000520602 HECTD1Q9ULT8 2610 aa7.62□□□□□ -1.19
MCF2-209ENST00000520602 RPL39P62891 51 aaKnown RBP7.62□□□□□ -1.19
MCF2-209ENST00000520602 ODF1Q14990 250 aa7.62□□□□□ -1.19
MCF2-209ENST00000520602 RASL10AQ92737 203 aa7.62□□□□□ -1.19
MCF2-209ENST00000520602 MRPL16Q9NX20 251 aaKnown RBP7.62□□□□□ -1.19
MCF2-209ENST00000520602 TMEM238LA0A1B0GVL6 79 aa7.61□□□□□ -1.19
MCF2-209ENST00000520602 DNAJC9-AS1A6NH13 148 aa7.61□□□□□ -1.19
MCF2-209ENST00000520602 A6NJY4 79 aa7.61□□□□□ -1.19
MCF2-209ENST00000520602 DCANP1Q8TF63 244 aa7.61□□□□□ -1.19
MCF2-209ENST00000520602 COTL1Q14019 142 aa7.61□□□□□ -1.19
MCF2-209ENST00000520602 PRM2P04554 102 aa7.6□□□□□ -1.19
MCF2-209ENST00000520602 HLA-DRB4P13762 266 aa7.6□□□□□ -1.19
MCF2-209ENST00000520602 CFHR3Q02985 330 aa7.6□□□□□ -1.19
MCF2-209ENST00000520602 COX8CQ7Z4L0 72 aa7.6□□□□□ -1.19
MCF2-209ENST00000520602 CBY1Q9Y3M2 126 aa7.6□□□□□ -1.19
MCF2-209ENST00000520602 HLA-DRB4X5D2U9 266 aa7.6□□□□□ -1.19
MCF2-209ENST00000520602 K7EMI3 77 aa7.6□□□□□ -1.19
MCF2-209ENST00000520602 RNASE3P12724 160 aaKnown RBP7.6□□□□□ -1.19
MCF2-209ENST00000520602 CNFNQ9BYD5 112 aa7.6□□□□□ -1.19
MCF2-209ENST00000520602 UBE2L6O14933 153 aa7.6□□□□□ -1.19
MCF2-209ENST00000520602 RNASE13Q5GAN3 156 aaKnown RBP7.6□□□□□ -1.19
MCF2-209ENST00000520602 CITED2Q99967 270 aaPredicted RBP7.6□□□□□ -1.19
MCF2-209ENST00000520602 PRADC1Q9BSG0 188 aa7.6□□□□□ -1.19
MCF2-209ENST00000520602 SMG1Q96Q15 3661 aaKnown RBP7.6□□□□□ -1.19
MCF2-209ENST00000520602 FOSL1P15407 271 aa7.59□□□□□ -1.19
MCF2-209ENST00000520602 PMVKQ15126 192 aa7.59□□□□□ -1.19
MCF2-209ENST00000520602 LRRC75A-AS1Q8N1F1 130 aa7.59□□□□□ -1.19
MCF2-209ENST00000520602 SAMD5Q5TGI4 173 aa7.59□□□□□ -1.19
MCF2-209ENST00000520602 Q6ZSV7 163 aa7.59□□□□□ -1.19
MCF2-209ENST00000520602 NRACQ8N912 160 aa7.59□□□□□ -1.19
MCF2-209ENST00000520602 I3L3M4 83 aa7.59□□□□□ -1.19
MCF2-209ENST00000520602 ZFP2Q6ZN57 461 aa7.59□□□□□ -1.19
MCF2-209ENST00000520602 PSMG3-AS1Q96PY0 264 aa7.59□□□□□ -1.19
MCF2-209ENST00000520602 SPXQ9BT56 116 aa7.59□□□□□ -1.19
MCF2-209ENST00000520602 A0A096LNJ9 63 aa7.59□□□□□ -1.2
MCF2-209ENST00000520602 FLNAP21333 2647 aaKnown RBP7.58□□□□□ -1.2
MCF2-209ENST00000520602 TRBV25-1A0A075B6N4 114 aa7.58□□□□□ -1.2
MCF2-209ENST00000520602 TRBV7-9A0A0J9YWB2 115 aa7.58□□□□□ -1.2
MCF2-209ENST00000520602 K7ERJ3 54 aa7.58□□□□□ -1.2
MCF2-209ENST00000520602 SOCS3O14543 225 aa7.58□□□□□ -1.2
MCF2-209ENST00000520602 K7ERU9 68 aa7.58□□□□□ -1.2
MCF2-209ENST00000520602 DEFB125Q8N687 156 aa7.58□□□□□ -1.2
MCF2-209ENST00000520602 HRNRQ86YZ3 2850 aaPredicted RBP7.58□□□□□ -1.2
MCF2-209ENST00000520602 TRGV4A0A0C4DH28 118 aa7.58□□□□□ -1.2
MCF2-209ENST00000520602 A8MWV9 139 aa7.58□□□□□ -1.2
MCF2-209ENST00000520602 LGALS9O00182 355 aa7.58□□□□□ -1.2
MCF2-209ENST00000520602 MED14OSP0DP75 135 aa7.58□□□□□ -1.2
MCF2-209ENST00000520602 C19orf54Q5BKX5 351 aa7.58□□□□□ -1.2
MCF2-209ENST00000520602 C4orf3Q8WVX3 66 aa7.58□□□□□ -1.2
MCF2-209ENST00000520602 SPAG8Q99932 426 aaPredicted RBP7.58□□□□□ -1.2
MCF2-209ENST00000520602 TRAV2A0A0B4J234 112 aa7.57□□□□□ -1.2
MCF2-209ENST00000520602 LINC01549A6NIU2 74 aa7.57□□□□□ -1.2
MCF2-209ENST00000520602 M0R2P5 195 aa7.57□□□□□ -1.2
MCF2-209ENST00000520602 ADAMTSL5Q6ZMM2 481 aa7.57□□□□□ -1.2
MCF2-209ENST00000520602 BOD1L2Q8IYS8 172 aa7.57□□□□□ -1.2
MCF2-209ENST00000520602 IGKV2D-26A0A0A0MRZ7 120 aa7.57□□□□□ -1.2
MCF2-209ENST00000520602 A0A0U1RRA0 63 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms