RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 PACRGQ96M98 296 aaPredicted RBP6.2□□□□□ -1.42
VAPB-206ENST00000520497 PRELID3AQ96N28 172 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 LINC01587Q99440 93 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 MAP1LC3AQ9H492 121 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 SCRT2Q9NQ03 307 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 XCL2Q9UBD3 114 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 NBEAL2Q6ZNJ1 2754 aa6.2□□□□□ -1.42
VAPB-206ENST00000520497 IGHV3-16A0A0C4DH30 117 aa6.19□□□□□ -1.42
VAPB-206ENST00000520497 D6R8Y8 96 aa6.19□□□□□ -1.42
VAPB-206ENST00000520497 SMIM6P0DI80 62 aa6.19□□□□□ -1.42
VAPB-206ENST00000520497 RNASE3P12724 160 aaKnown RBP6.19□□□□□ -1.42
VAPB-206ENST00000520497 MRPL51Q4U2R6 128 aaKnown RBP6.19□□□□□ -1.42
VAPB-206ENST00000520497 PIK3CD-AS1Q5SR53 167 aa6.19□□□□□ -1.42
VAPB-206ENST00000520497 XP32Q5T750 250 aa6.19□□□□□ -1.42
VAPB-206ENST00000520497 FA2HQ7L5A8 372 aa6.19□□□□□ -1.42
VAPB-206ENST00000520497 PRSS3P2Q8NHM4 247 aa6.19□□□□□ -1.42
VAPB-206ENST00000520497 C9orf85Q96MD7 179 aa6.19□□□□□ -1.42
VAPB-206ENST00000520497 SPXQ9BT56 116 aa6.19□□□□□ -1.42
VAPB-206ENST00000520497 KRTAP4-8Q9BYQ9 185 aa6.19□□□□□ -1.42
VAPB-206ENST00000520497 CSTL1Q9H114 145 aa6.19□□□□□ -1.42
VAPB-206ENST00000520497 TP53TG3Q9ULZ0 132 aa6.19□□□□□ -1.42
VAPB-206ENST00000520497 TENM3Q9P273 2699 aa6.18□□□□□ -1.42
VAPB-206ENST00000520497 MGPP08493 103 aa6.18□□□□□ -1.42
VAPB-206ENST00000520497 AMTP48728 403 aa6.18□□□□□ -1.42
VAPB-206ENST00000520497 ZNF705AQ6ZN79 300 aaPredicted RBP6.18□□□□□ -1.42
VAPB-206ENST00000520497 HIST1H2BLQ99880 126 aa6.18□□□□□ -1.42
VAPB-206ENST00000520497 NDUFAF3Q9BU61 184 aa6.18□□□□□ -1.42
VAPB-206ENST00000520497 NXT2Q9NPJ8 142 aaKnown RBP6.18□□□□□ -1.42
VAPB-206ENST00000520497 U3KQK5 164 aa6.18□□□□□ -1.42
VAPB-206ENST00000520497 LINC00614P0C842 121 aa6.17□□□□□ -1.42
VAPB-206ENST00000520497 HTN1P15515 57 aa6.17□□□□□ -1.42
VAPB-206ENST00000520497 EVI2AP22794 236 aa6.17□□□□□ -1.42
VAPB-206ENST00000520497 APOC4P55056 127 aa6.17□□□□□ -1.42
VAPB-206ENST00000520497 IQCJQ1A5X6 159 aa6.17□□□□□ -1.42
VAPB-206ENST00000520497 NIT1Q86X76 327 aa6.17□□□□□ -1.42
VAPB-206ENST00000520497 C11orf72Q8NBR9 251 aa6.17□□□□□ -1.42
VAPB-206ENST00000520497 OR10D4PQ8NGN7 298 aa6.17□□□□□ -1.42
VAPB-206ENST00000520497 IL17DQ8TAD2 202 aa6.17□□□□□ -1.42
VAPB-206ENST00000520497 PTH2Q96A98 100 aa6.17□□□□□ -1.42
VAPB-206ENST00000520497 RCHY1Q96PM5 261 aa6.17□□□□□ -1.42
VAPB-206ENST00000520497 GSN-AS1Q9NRJ2 163 aa6.17□□□□□ -1.42
VAPB-206ENST00000520497 MSRB1Q9NZV6 116 aa6.17□□□□□ -1.42
VAPB-206ENST00000520497 MDFICQ9P1T7 246 aa6.17□□□□□ -1.42
VAPB-206ENST00000520497 A8MWV9 139 aa6.16□□□□□ -1.42
VAPB-206ENST00000520497 H7C1H1 209 aa6.16□□□□□ -1.42
VAPB-206ENST00000520497 M0R2P5 195 aa6.16□□□□□ -1.42
VAPB-206ENST00000520497 RHODO00212 210 aa6.16□□□□□ -1.42
VAPB-206ENST00000520497 PRM2P04554 102 aa6.16□□□□□ -1.42
VAPB-206ENST00000520497 ZNF876PQ49A33 203 aa6.16□□□□□ -1.42
VAPB-206ENST00000520497 C14orf178Q8N769 122 aaPredicted RBP6.16□□□□□ -1.42
VAPB-206ENST00000520497 RNASE8Q8TDE3 154 aaKnown RBP6.16□□□□□ -1.42
VAPB-206ENST00000520497 AP5S1Q9NUS5 200 aa6.16□□□□□ -1.42
VAPB-206ENST00000520497 IGHV3OR16-12A0A075B7B8 117 aa6.15□□□□□ -1.42
VAPB-206ENST00000520497 PLAC8L1A1L4L8 177 aa6.15□□□□□ -1.42
VAPB-206ENST00000520497 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.15□□□□□ -1.42
VAPB-206ENST00000520497 F5H697 171 aa6.15□□□□□ -1.42
VAPB-206ENST00000520497 K7EMI3 77 aa6.15□□□□□ -1.42
VAPB-206ENST00000520497 TNFRSF6BO95407 300 aa6.15□□□□□ -1.42
VAPB-206ENST00000520497 NCR2O95944 276 aa6.15□□□□□ -1.42
VAPB-206ENST00000520497 AZU1P20160 251 aa6.15□□□□□ -1.42
VAPB-206ENST00000520497 ZNF56Q15929 161 aa6.15□□□□□ -1.42
VAPB-206ENST00000520497 TMEM263Q8WUH6 116 aaKnown RBP6.15□□□□□ -1.42
VAPB-206ENST00000520497 RNF185Q96GF1 192 aa6.15□□□□□ -1.42
VAPB-206ENST00000520497 C16orf74Q96GX8 76 aa6.15□□□□□ -1.42
VAPB-206ENST00000520497 LOC389332A0A1B0GUA5 103 aa6.14□□□□□ -1.43
VAPB-206ENST00000520497 K7EIL1 84 aa6.14□□□□□ -1.43
VAPB-206ENST00000520497 SPRY2O43597 315 aa6.14□□□□□ -1.43
VAPB-206ENST00000520497 NPYP01303 97 aa6.14□□□□□ -1.43
VAPB-206ENST00000520497 G0S2P27469 103 aa6.14□□□□□ -1.43
VAPB-206ENST00000520497 RRN3P1Q2M238 152 aa6.14□□□□□ -1.43
VAPB-206ENST00000520497 DEFB135Q30KP9 77 aa6.14□□□□□ -1.43
VAPB-206ENST00000520497 FAM74A4Q5TZK3 123 aa6.14□□□□□ -1.43
VAPB-206ENST00000520497 Q6ZWC4 215 aa6.14□□□□□ -1.43
VAPB-206ENST00000520497 C12orf57Q99622 126 aa6.14□□□□□ -1.43
VAPB-206ENST00000520497 C20orf78Q9BR46 151 aa6.14□□□□□ -1.43
VAPB-206ENST00000520497 HSPB8Q9UJY1 196 aa6.14□□□□□ -1.43
VAPB-206ENST00000520497 X6R8D5 127 aa6.14□□□□□ -1.43
VAPB-206ENST00000520497 C20orf202A1L168 122 aa6.13□□□□□ -1.43
VAPB-206ENST00000520497 SMIM9A6NGZ8 99 aa6.13□□□□□ -1.43
VAPB-206ENST00000520497 IFITM10A6NMD0 228 aa6.13□□□□□ -1.43
VAPB-206ENST00000520497 SMKR1H3BMG3 65 aa6.13□□□□□ -1.43
VAPB-206ENST00000520497 TCAPO15273 167 aa6.13□□□□□ -1.43
VAPB-206ENST00000520497 CIDEAO60543 219 aa6.13□□□□□ -1.43
VAPB-206ENST00000520497 LEPROTL1O95214 131 aa6.13□□□□□ -1.43
VAPB-206ENST00000520497 S100A12P80511 92 aa6.13□□□□□ -1.43
VAPB-206ENST00000520497 LINC00518Q8N0U6 118 aa6.13□□□□□ -1.43
VAPB-206ENST00000520497 POM121L12Q8N7R1 296 aa6.13□□□□□ -1.43
VAPB-206ENST00000520497 Q8N8P6 123 aa6.13□□□□□ -1.43
VAPB-206ENST00000520497 RNF183Q96D59 192 aa6.13□□□□□ -1.43
VAPB-206ENST00000520497 ST20Q9HBF5 79 aa6.13□□□□□ -1.43
VAPB-206ENST00000520497 A0A087WWL8 130 aa6.12□□□□□ -1.43
VAPB-206ENST00000520497 IGHV1-24A0A0C4DH33 117 aa6.12□□□□□ -1.43
VAPB-206ENST00000520497 LINC01549A6NIU2 74 aa6.12□□□□□ -1.43
VAPB-206ENST00000520497 PRSS47A8MTI9 375 aa6.12□□□□□ -1.43
VAPB-206ENST00000520497 SCGB1D1O95968 90 aa6.12□□□□□ -1.43
VAPB-206ENST00000520497 HBDP02042 147 aa6.12□□□□□ -1.43
VAPB-206ENST00000520497 IFI27P40305 119 aaPredicted RBP6.12□□□□□ -1.43
VAPB-206ENST00000520497 LINC00310P59036 64 aa6.12□□□□□ -1.43
VAPB-206ENST00000520497 KRTDAPP60985 99 aa6.12□□□□□ -1.43
VAPB-206ENST00000520497 SUMO2P61956 95 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms