RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 SMUG1Q53HV7 270 aa5.67□□□□□ -1.5
PABPC1-213ENST00000519848 OR10J3Q5JRS4 329 aa5.67□□□□□ -1.5
PABPC1-213ENST00000519848 ATP6V0E2Q8NHE4 81 aa5.67□□□□□ -1.5
PABPC1-213ENST00000519848 PTH2Q96A98 100 aa5.67□□□□□ -1.5
PABPC1-213ENST00000519848 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.66□□□□□ -1.5
PABPC1-213ENST00000519848 TMSB15BA0A087X1C1 80 aa5.66□□□□□ -1.5
PABPC1-213ENST00000519848 TAAR5O14804 337 aa5.66□□□□□ -1.5
PABPC1-213ENST00000519848 CXorf1O96002 111 aa5.66□□□□□ -1.5
PABPC1-213ENST00000519848 FAM74A1Q5RGS3 127 aa5.66□□□□□ -1.5
PABPC1-213ENST00000519848 COX8CQ7Z4L0 72 aa5.66□□□□□ -1.5
PABPC1-213ENST00000519848 OR11H4Q8NGC9 324 aa5.66□□□□□ -1.5
PABPC1-213ENST00000519848 BAALCQ8WXS3 180 aa5.66□□□□□ -1.5
PABPC1-213ENST00000519848 KCNS1Q96KK3 526 aa5.66□□□□□ -1.5
PABPC1-213ENST00000519848 GTSF1LQ9H1H1 148 aa5.66□□□□□ -1.5
PABPC1-213ENST00000519848 MED28Q9H204 178 aa5.66□□□□□ -1.5
PABPC1-213ENST00000519848 CTXND1A0A1B0GTU2 59 aa5.65□□□□□ -1.5
PABPC1-213ENST00000519848 SERTM2A0A1B0GWG4 89 aa5.65□□□□□ -1.5
PABPC1-213ENST00000519848 A0A1W2PRE2 83 aa5.65□□□□□ -1.5
PABPC1-213ENST00000519848 ARMS2P0C7Q2 107 aa5.65□□□□□ -1.5
PABPC1-213ENST00000519848 MGST1P10620 155 aaKnown RBP5.65□□□□□ -1.5
PABPC1-213ENST00000519848 HNRNPA3P51991 378 aaKnown RBP5.65□□□□□ -1.5
PABPC1-213ENST00000519848 DNLZQ5SXM8 178 aa5.65□□□□□ -1.5
PABPC1-213ENST00000519848 NDFIP1Q9BT67 221 aa5.65□□□□□ -1.5
PABPC1-213ENST00000519848 TMEM70Q9BUB7 260 aa5.65□□□□□ -1.5
PABPC1-213ENST00000519848 ACTR3CQ9C0K3 210 aaPredicted RBP5.65□□□□□ -1.5
PABPC1-213ENST00000519848 IL36BQ9NZH7 164 aa5.65□□□□□ -1.5
PABPC1-213ENST00000519848 PKHD1L1Q86WI1 4243 aa5.65□□□□□ -1.51
PABPC1-213ENST00000519848 DMBT1Q9UGM3 2413 aaPredicted RBP5.65□□□□□ -1.51
PABPC1-213ENST00000519848 HMCN2Q8NDA2 5059 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 MUC21A0A0G2JKD1 596 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 MUC21A0A140T8X8 626 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 MAP1LC3B2A6NCE7 125 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 B4DEV8 164 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 ASIPP42127 132 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 SERF2P84101 59 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 LAGE3Q14657 143 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 ZNF674Q2M3X9 581 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 SCXQ7RTU7 201 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 NIT1Q86X76 327 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 C10orf126Q8N4M7 172 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 OR10AG1Q8NH19 301 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 FRZBQ92765 325 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 PRADC1Q9BSG0 188 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 MAP1LC3BQ9GZQ8 125 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 TMEM167BQ9NRX6 74 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 FAT3Q8TDW7 4589 aa5.64□□□□□ -1.51
PABPC1-213ENST00000519848 TRAV9-2A0A087WT02 112 aa5.63□□□□□ -1.51
PABPC1-213ENST00000519848 A0A1B0GV50 99 aa5.63□□□□□ -1.51
PABPC1-213ENST00000519848 PANO1I0J062 215 aa5.63□□□□□ -1.51
PABPC1-213ENST00000519848 K7EP13 123 aa5.63□□□□□ -1.51
PABPC1-213ENST00000519848 ARPC5O15511 151 aa5.63□□□□□ -1.51
PABPC1-213ENST00000519848 PSCAO43653 123 aa5.63□□□□□ -1.51
PABPC1-213ENST00000519848 LTAP01374 205 aa5.63□□□□□ -1.51
PABPC1-213ENST00000519848 C1QBP02746 253 aa5.63□□□□□ -1.51
PABPC1-213ENST00000519848 LGALSLQ3ZCW2 172 aaPredicted RBP5.63□□□□□ -1.51
PABPC1-213ENST00000519848 FAM74A4Q5TZK3 123 aa5.63□□□□□ -1.51
PABPC1-213ENST00000519848 KRTAP26-1Q6PEX3 210 aa5.63□□□□□ -1.51
PABPC1-213ENST00000519848 ZFP2Q6ZN57 461 aa5.63□□□□□ -1.51
PABPC1-213ENST00000519848 TRAV8-6A0A0B4J262 113 aa5.62□□□□□ -1.51
PABPC1-213ENST00000519848 M0R381 172 aa5.62□□□□□ -1.51
PABPC1-213ENST00000519848 IFNA7P01567 189 aa5.62□□□□□ -1.51
PABPC1-213ENST00000519848 UBE2D3P61077 147 aa5.62□□□□□ -1.51
PABPC1-213ENST00000519848 UBE2D2P62837 147 aa5.62□□□□□ -1.51
PABPC1-213ENST00000519848 ENHOQ6UWT2 76 aa5.62□□□□□ -1.51
PABPC1-213ENST00000519848 NTM-AS1Q6ZSK4 140 aa5.62□□□□□ -1.51
PABPC1-213ENST00000519848 SH2D6Q7Z4S9 175 aa5.62□□□□□ -1.51
PABPC1-213ENST00000519848 SFRP2Q96HF1 295 aa5.62□□□□□ -1.51
PABPC1-213ENST00000519848 DERL1Q9BUN8 251 aa5.62□□□□□ -1.51
PABPC1-213ENST00000519848 KLK12Q9UKR0 248 aa5.62□□□□□ -1.51
PABPC1-213ENST00000519848 TRBV6-1A0A0K0K1D8 114 aa5.61□□□□□ -1.51
PABPC1-213ENST00000519848 FABP5P3A8MUU1 101 aa5.61□□□□□ -1.51
PABPC1-213ENST00000519848 A8MWV9 139 aa5.61□□□□□ -1.51
PABPC1-213ENST00000519848 PAGE4O60829 102 aa5.61□□□□□ -1.51
PABPC1-213ENST00000519848 CCL20P78556 96 aa5.61□□□□□ -1.51
PABPC1-213ENST00000519848 SRSF3P84103 164 aaKnown RBP5.61□□□□□ -1.51
PABPC1-213ENST00000519848 ZFP69Q49AA0 526 aa5.61□□□□□ -1.51
PABPC1-213ENST00000519848 MPV17L2Q567V2 206 aa5.61□□□□□ -1.51
PABPC1-213ENST00000519848 SAPCD1Q5SSQ6 148 aa5.61□□□□□ -1.51
PABPC1-213ENST00000519848 PRR27Q6MZM9 219 aa5.61□□□□□ -1.51
PABPC1-213ENST00000519848 ATRAIDQ6UW56 229 aa5.61□□□□□ -1.51
PABPC1-213ENST00000519848 NEXN-AS1Q8NBZ9 246 aa5.61□□□□□ -1.51
PABPC1-213ENST00000519848 MLST8Q9BVC4 326 aa5.61□□□□□ -1.51
PABPC1-213ENST00000519848 KIF25-AS1Q9Y6Z4 181 aa5.61□□□□□ -1.51
PABPC1-213ENST00000519848 K7EQM0 130 aa5.6□□□□□ -1.51
PABPC1-213ENST00000519848 IGLV2-8P01709 118 aa5.6□□□□□ -1.51
PABPC1-213ENST00000519848 MBP02144 154 aa5.6□□□□□ -1.51
PABPC1-213ENST00000519848 S100A4P26447 101 aaKnown RBP5.6□□□□□ -1.51
PABPC1-213ENST00000519848 PIK3CD-AS1Q5SR53 167 aa5.6□□□□□ -1.51
PABPC1-213ENST00000519848 Q8N976 141 aa5.6□□□□□ -1.51
PABPC1-213ENST00000519848 DEFB104AQ8WTQ1 72 aa5.6□□□□□ -1.51
PABPC1-213ENST00000519848 ZNF471Q9BX82 626 aaPredicted RBP5.6□□□□□ -1.51
PABPC1-213ENST00000519848 GFRA4Q9GZZ7 299 aa5.6□□□□□ -1.51
PABPC1-213ENST00000519848 TRBV20OR9-2A0A075B6H5 130 aa5.59□□□□□ -1.51
PABPC1-213ENST00000519848 BORCS7-ASMTA0A0B4J1R7 106 aa5.59□□□□□ -1.51
PABPC1-213ENST00000519848 RBFOX3A6NFN3 312 aa5.59□□□□□ -1.51
PABPC1-213ENST00000519848 SNAI2O43623 268 aa5.59□□□□□ -1.51
PABPC1-213ENST00000519848 GZMBP10144 247 aa5.59□□□□□ -1.51
PABPC1-213ENST00000519848 AKR1C8PQ5T2L2 129 aa5.59□□□□□ -1.51
PABPC1-213ENST00000519848 FAM162BQ5T6X4 162 aa5.59□□□□□ -1.51
PABPC1-213ENST00000519848 CLPSL2Q6UWE3 100 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 229 ms