RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 LINC00315P59091 139 aa12.17□□□□□ -0.46
PCM1-206ENST00000518537 ZNF705AQ6ZN79 300 aaPredicted RBP12.17□□□□□ -0.46
PCM1-206ENST00000518537 TRPT1Q86TN4 253 aaKnown RBP12.17□□□□□ -0.46
PCM1-206ENST00000518537 C20orf78Q9BR46 151 aa12.17□□□□□ -0.46
PCM1-206ENST00000518537 SMIM2Q9BVW6 85 aa12.17□□□□□ -0.46
PCM1-206ENST00000518537 NOTCH2Q04721 2471 aa12.17□□□□□ -0.46
PCM1-206ENST00000518537 WNK1Q9H4A3 2382 aa12.17□□□□□ -0.46
PCM1-206ENST00000518537 F5H697 171 aa12.16□□□□□ -0.46
PCM1-206ENST00000518537 SUMO2P61956 95 aaKnown RBP12.16□□□□□ -0.46
PCM1-206ENST00000518537 LAGE3Q14657 143 aa12.16□□□□□ -0.46
PCM1-206ENST00000518537 ZNF876PQ49A33 203 aa12.16□□□□□ -0.46
PCM1-206ENST00000518537 FAM74A4Q5TZK3 123 aa12.16□□□□□ -0.46
PCM1-206ENST00000518537 TMEM158Q8WZ71 300 aa12.16□□□□□ -0.46
PCM1-206ENST00000518537 XCL2Q9UBD3 114 aa12.16□□□□□ -0.46
PCM1-206ENST00000518537 TRAV9-2A0A087WT02 112 aa12.15□□□□□ -0.46
PCM1-206ENST00000518537 TCAPO15273 167 aa12.15□□□□□ -0.46
PCM1-206ENST00000518537 ZNF415Q09FC8 603 aa12.15□□□□□ -0.46
PCM1-206ENST00000518537 SUMO4Q6EEV6 95 aa12.15□□□□□ -0.46
PCM1-206ENST00000518537 LINC00482Q8N8I6 264 aa12.15□□□□□ -0.46
PCM1-206ENST00000518537 IFI27L1Q96BM0 104 aa12.15□□□□□ -0.46
PCM1-206ENST00000518537 LINC00467Q9BRT7 94 aa12.15□□□□□ -0.46
PCM1-206ENST00000518537 MCRIP2Q9BUT9 160 aaKnown RBP12.15□□□□□ -0.46
PCM1-206ENST00000518537 NUTF2P61970 127 aaKnown RBP12.15□□□□□ -0.47
PCM1-206ENST00000518537 BEAN1Q3B7T3 259 aa12.15□□□□□ -0.47
PCM1-206ENST00000518537 LINC01545Q5VT33 79 aa12.15□□□□□ -0.47
PCM1-206ENST00000518537 MAJINQ3KP22 176 aa12.14□□□□□ -0.47
PCM1-206ENST00000518537 NDUFAF3Q9BU61 184 aa12.14□□□□□ -0.47
PCM1-206ENST00000518537 PRM2P04554 102 aa12.13□□□□□ -0.47
PCM1-206ENST00000518537 ZNF56Q15929 161 aa12.13□□□□□ -0.47
PCM1-206ENST00000518537 FAM110AQ9BQ89 295 aa12.13□□□□□ -0.47
PCM1-206ENST00000518537 TMEM208Q9BTX3 173 aa12.13□□□□□ -0.47
PCM1-206ENST00000518537 CRYGDP07320 174 aa12.13□□□□□ -0.47
PCM1-206ENST00000518537 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.13□□□□□ -0.47
PCM1-206ENST00000518537 C18orf15Q96N68 181 aa12.13□□□□□ -0.47
PCM1-206ENST00000518537 ST20Q9HBF5 79 aa12.13□□□□□ -0.47
PCM1-206ENST00000518537 PMCHL2Q9BQD1 86 aa12.12□□□□□ -0.47
PCM1-206ENST00000518537 MIEN1Q9BRT3 115 aa12.12□□□□□ -0.47
PCM1-206ENST00000518537 M0R2P5 195 aa12.12□□□□□ -0.47
PCM1-206ENST00000518537 C14orf144Q96I85 54 aa12.12□□□□□ -0.47
PCM1-206ENST00000518537 NUDT3O95989 172 aa12.11□□□□□ -0.47
PCM1-206ENST00000518537 ORMDL2Q53FV1 153 aa12.11□□□□□ -0.47
PCM1-206ENST00000518537 CSTL1Q9H114 145 aa12.11□□□□□ -0.47
PCM1-206ENST00000518537 SETXQ7Z333 2677 aaKnown RBP12.11□□□□□ -0.47
PCM1-206ENST00000518537 IGHV3OR16-12A0A075B7B8 117 aa12.11□□□□□ -0.47
PCM1-206ENST00000518537 LGALS9BQ3B8N2 356 aa12.11□□□□□ -0.47
PCM1-206ENST00000518537 LGALS9CQ6DKI2 356 aa12.11□□□□□ -0.47
PCM1-206ENST00000518537 WFDC10AQ9H1F0 79 aa12.11□□□□□ -0.47
PCM1-206ENST00000518537 HSBP1L1C9JCN9 74 aa12.1□□□□□ -0.47
PCM1-206ENST00000518537 K7EMI3 77 aa12.1□□□□□ -0.47
PCM1-206ENST00000518537 IGLL1P15814 213 aa12.1□□□□□ -0.47
PCM1-206ENST00000518537 C1orf158Q8N1D5 194 aa12.1□□□□□ -0.47
PCM1-206ENST00000518537 SPXQ9BT56 116 aa12.1□□□□□ -0.47
PCM1-206ENST00000518537 C19orf73Q9NVV2 129 aa12.1□□□□□ -0.47
PCM1-206ENST00000518537 FN1P02751 2386 aaKnown RBP12.09□□□□□ -0.47
PCM1-206ENST00000518537 hDV102S1A0JD36 115 aa12.09□□□□□ -0.47
PCM1-206ENST00000518537 ATP5LO75964 103 aa12.09□□□□□ -0.47
PCM1-206ENST00000518537 IGLC3P0DOY3 106 aa12.09□□□□□ -0.47
PCM1-206ENST00000518537 RPL32P62910 135 aaKnown RBP12.09□□□□□ -0.47
PCM1-206ENST00000518537 C11orf72Q8NBR9 251 aa12.09□□□□□ -0.47
PCM1-206ENST00000518537 PTH2Q96A98 100 aa12.09□□□□□ -0.47
PCM1-206ENST00000518537 RPL35AP18077 110 aaKnown RBP12.08□□□□□ -0.48
PCM1-206ENST00000518537 GOLT1BQ9Y3E0 138 aa12.08□□□□□ -0.48
PCM1-206ENST00000518537 SETD2Q9BYW2 2564 aaPredicted RBP12.08□□□□□ -0.48
PCM1-206ENST00000518537 A8MWV9 139 aa12.08□□□□□ -0.48
PCM1-206ENST00000518537 M0QY20 66 aa12.08□□□□□ -0.48
PCM1-206ENST00000518537 PIK3CD-AS1Q5SR53 167 aa12.08□□□□□ -0.48
PCM1-206ENST00000518537 UQCR10Q9UDW1 63 aa12.08□□□□□ -0.48
PCM1-206ENST00000518537 HIVEP1P15822 2718 aa12.07□□□□□ -0.48
PCM1-206ENST00000518537 TRBV6-5A0A0K0K1A5 114 aa12.07□□□□□ -0.48
PCM1-206ENST00000518537 PRSS1P07477 247 aa12.07□□□□□ -0.48
PCM1-206ENST00000518537 POLR2KP53803 58 aaKnown RBP12.07□□□□□ -0.48
PCM1-206ENST00000518537 NEGR1Q7Z3B1 354 aa12.07□□□□□ -0.48
PCM1-206ENST00000518537 NSD1Q96L73 2696 aaPredicted RBP12.07□□□□□ -0.48
PCM1-206ENST00000518537 VCYO14598 125 aa12.06□□□□□ -0.48
PCM1-206ENST00000518537 AZU1P20160 251 aa12.06□□□□□ -0.48
PCM1-206ENST00000518537 C9orf66Q5T8R8 295 aa12.06□□□□□ -0.48
PCM1-206ENST00000518537 CITED1Q99966 193 aa12.06□□□□□ -0.48
PCM1-206ENST00000518537 SDHAF1A6NFY7 115 aa12.06□□□□□ -0.48
PCM1-206ENST00000518537 INSL3P51460 131 aa12.06□□□□□ -0.48
PCM1-206ENST00000518537 IGHV3-73A0A0B4J1V6 119 aa12.05□□□□□ -0.48
PCM1-206ENST00000518537 MORN3Q6PF18 240 aaPredicted RBP12.05□□□□□ -0.48
PCM1-206ENST00000518537 MRPL16Q9NX20 251 aaKnown RBP12.05□□□□□ -0.48
PCM1-206ENST00000518537 H7C1H1 209 aa12.05□□□□□ -0.48
PCM1-206ENST00000518537 TOMM6Q96B49 74 aa12.05□□□□□ -0.48
PCM1-206ENST00000518537 KIR2DL4Q99706 377 aa12.05□□□□□ -0.48
PCM1-206ENST00000518537 C1QTNF4Q9BXJ3 329 aa12.05□□□□□ -0.48
PCM1-206ENST00000518537 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.03□□□□□ -0.48
PCM1-206ENST00000518537 GIG44P09565 113 aaPredicted RBP12.03□□□□□ -0.48
PCM1-206ENST00000518537 C2orf66Q6UXQ4 117 aa12.03□□□□□ -0.48
PCM1-206ENST00000518537 Q6ZN92 141 aa12.03□□□□□ -0.48
PCM1-206ENST00000518537 SCGB3A1Q96QR1 104 aa12.03□□□□□ -0.48
PCM1-206ENST00000518537 DKK2Q9UBU2 259 aa12.03□□□□□ -0.48
PCM1-206ENST00000518537 G0S2P27469 103 aa12.03□□□□□ -0.48
PCM1-206ENST00000518537 CFAP126Q5VTH2 177 aa12.03□□□□□ -0.48
PCM1-206ENST00000518537 GTSCR1Q86UQ5 136 aa12.03□□□□□ -0.48
PCM1-206ENST00000518537 TRBV27A0A0K0K1C4 114 aa12.02□□□□□ -0.48
PCM1-206ENST00000518537 ODF1Q14990 250 aa12.02□□□□□ -0.48
PCM1-206ENST00000518537 UFSP1Q6NVU6 142 aa12.02□□□□□ -0.48
PCM1-206ENST00000518537 RHODO00212 210 aa12.02□□□□□ -0.49
PCM1-206ENST00000518537 HNRNPA3P51991 378 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms