RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 MRPL54Q6P161 138 aaKnown RBP2.9□□□□□ -1.95
CTNNA1-202ENST00000517533 FP248Q71RG6 208 aaPredicted RBP2.9□□□□□ -1.95
CTNNA1-202ENST00000517533 VSTM2AQ8TAG5 236 aa2.9□□□□□ -1.95
CTNNA1-202ENST00000517533 COL4A5P29400 1685 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 WNK3Q9BYP7 1800 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 KIAA1549Q9HCM3 1950 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 NUMA1Q14980 2115 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 MCRIP1C9JLW8 97 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 IFNA17P01571 189 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 ADCYAP1P18509 176 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 BRS3P32247 399 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 KRTAP10-8P60410 259 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 Q56UQ5 140 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 C1orf137Q5JT78 98 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 C2orf82Q6UX34 121 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 SLC25A26Q70HW3 274 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 DOT1LQ8TEK3 1739 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 COPS9Q8WXC6 57 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 TOGARAM1Q9Y4F4 1720 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 LAMB4A4D0S4 1761 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 PAPPAQ13219 1627 aa2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 COL11A1P12107 1806 aaPredicted RBP2.89□□□□□ -1.95
CTNNA1-202ENST00000517533 C5P01031 1676 aa2.88□□□□□ -1.95
CTNNA1-202ENST00000517533 ZNF831Q5JPB2 1677 aa2.88□□□□□ -1.95
CTNNA1-202ENST00000517533 PRB4P10163 310 aaPredicted RBP2.88□□□□□ -1.95
CTNNA1-202ENST00000517533 PKIAP61925 76 aa2.88□□□□□ -1.95
CTNNA1-202ENST00000517533 Q6ZS92 163 aa2.88□□□□□ -1.95
CTNNA1-202ENST00000517533 RPRMQ9NS64 109 aa2.88□□□□□ -1.95
CTNNA1-202ENST00000517533 ARFGEF2Q9Y6D5 1785 aa2.87□□□□□ -1.95
CTNNA1-202ENST00000517533 LTBP2Q14767 1821 aa2.87□□□□□ -1.95
CTNNA1-202ENST00000517533 TRAV14DV4A0A0A6YYC5 116 aa2.87□□□□□ -1.95
CTNNA1-202ENST00000517533 OOSP1A8MZH6 123 aa2.87□□□□□ -1.95
CTNNA1-202ENST00000517533 H3BRN7 92 aa2.87□□□□□ -1.95
CTNNA1-202ENST00000517533 GNG2P59768 71 aa2.87□□□□□ -1.95
CTNNA1-202ENST00000517533 CNBPP62633 177 aaKnown RBP2.87□□□□□ -1.95
CTNNA1-202ENST00000517533 C9orf153Q5TBE3 101 aa2.87□□□□□ -1.95
CTNNA1-202ENST00000517533 Q6AWC8 147 aa2.87□□□□□ -1.95
CTNNA1-202ENST00000517533 OR2T2Q6IF00 324 aa2.87□□□□□ -1.95
CTNNA1-202ENST00000517533 C5orf17Q8NAS9 161 aa2.87□□□□□ -1.95
CTNNA1-202ENST00000517533 NHSQ6T4R5 1651 aa2.87□□□□□ -1.95
CTNNA1-202ENST00000517533 TJP1Q07157 1748 aa2.87□□□□□ -1.95
CTNNA1-202ENST00000517533 DIDO1Q9BTC0 2240 aaKnown RBP2.87□□□□□ -1.95
CTNNA1-202ENST00000517533 BTAF1O14981 1849 aa2.86□□□□□ -1.95
CTNNA1-202ENST00000517533 AFDNP55196 1824 aaKnown RBP2.86□□□□□ -1.95
CTNNA1-202ENST00000517533 CICQ96RK0 1608 aaPredicted RBP2.86□□□□□ -1.95
CTNNA1-202ENST00000517533 ZFHX2Q9C0A1 2572 aaPredicted RBP2.86□□□□□ -1.95
CTNNA1-202ENST00000517533 TRGV4A0A0C4DH28 118 aa2.86□□□□□ -1.95
CTNNA1-202ENST00000517533 IL5P05113 134 aa2.86□□□□□ -1.95
CTNNA1-202ENST00000517533 KRTAP13-3Q3SY46 172 aa2.86□□□□□ -1.95
CTNNA1-202ENST00000517533 SMIM5Q71RC9 77 aa2.86□□□□□ -1.95
CTNNA1-202ENST00000517533 LYPD1Q8N2G4 141 aa2.86□□□□□ -1.95
CTNNA1-202ENST00000517533 C10orf105Q8TEF2 133 aa2.86□□□□□ -1.95
CTNNA1-202ENST00000517533 TMEM242Q9NWH2 141 aa2.86□□□□□ -1.95
CTNNA1-202ENST00000517533 MICAL3Q7RTP6 2002 aa2.86□□□□□ -1.95
CTNNA1-202ENST00000517533 SDK2Q58EX2 2172 aa2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 RREB1Q92766 1687 aa2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 ZNF609O15014 1411 aa2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 C4BP0C0L5 1744 aa2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 NUP188Q5SRE5 1749 aa2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 SBF2Q86WG5 1849 aa2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 APOC4-APOC2K7ER74 178 aa2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 APOC2P02655 101 aa2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 PIRTP0C851 137 aa2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 S100A10P60903 97 aa2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 HCP5Q6MZN7 132 aa2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 DYNLRB2Q8TF09 96 aa2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 SPTSSAQ969W0 71 aa2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 TTTY12Q9BZ98 90 aa2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 ALPK3Q96L96 1907 aa2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 MYH9P35579 1960 aaKnown RBP2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 LY75O60449 1722 aa2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 COL5A3P25940 1745 aaPredicted RBP2.85□□□□□ -1.95
CTNNA1-202ENST00000517533 HEATR5BQ9P2D3 2071 aa2.84□□□□□ -1.95
CTNNA1-202ENST00000517533 ANKRD36CQ5JPF3 1778 aa2.84□□□□□ -1.95
CTNNA1-202ENST00000517533 TRBV6-8A0A0A6YYG3 113 aa2.84□□□□□ -1.95
CTNNA1-202ENST00000517533 MPC2O95563 127 aa2.84□□□□□ -1.95
CTNNA1-202ENST00000517533 IGLV3-19P01714 112 aa2.84□□□□□ -1.95
CTNNA1-202ENST00000517533 SPINK8P0C7L1 97 aa2.84□□□□□ -1.95
CTNNA1-202ENST00000517533 DEFB132Q7Z7B7 95 aa2.84□□□□□ -1.95
CTNNA1-202ENST00000517533 LINC00526Q96FQ7 95 aa2.84□□□□□ -1.95
CTNNA1-202ENST00000517533 SCN3AQ9NY46 2000 aa2.83□□□□□ -1.96
CTNNA1-202ENST00000517533 TRAV17A0A0B4J275 112 aa2.83□□□□□ -1.96
CTNNA1-202ENST00000517533 A0A0D9SFI3 127 aa2.83□□□□□ -1.96
CTNNA1-202ENST00000517533 IFITM1P13164 125 aa2.83□□□□□ -1.96
CTNNA1-202ENST00000517533 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
CTNNA1-202ENST00000517533 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.83□□□□□ -1.96
CTNNA1-202ENST00000517533 SVBPQ8N300 66 aa2.83□□□□□ -1.96
CTNNA1-202ENST00000517533 PLPP5Q8NEB5 264 aa2.83□□□□□ -1.96
CTNNA1-202ENST00000517533 DSCR8Q96T75 97 aa2.83□□□□□ -1.96
CTNNA1-202ENST00000517533 SNHG12Q9BXW3 62 aa2.83□□□□□ -1.96
CTNNA1-202ENST00000517533 NDUFA12Q9UI09 145 aa2.83□□□□□ -1.96
CTNNA1-202ENST00000517533 LRP5O75197 1615 aa2.82□□□□□ -1.96
CTNNA1-202ENST00000517533 COL4A4P53420 1690 aaPredicted RBP2.82□□□□□ -1.96
CTNNA1-202ENST00000517533 SCN7AQ01118 1682 aa2.82□□□□□ -1.96
CTNNA1-202ENST00000517533 BCORQ6W2J9 1755 aa2.82□□□□□ -1.96
CTNNA1-202ENST00000517533 AKAP11Q9UKA4 1901 aa2.82□□□□□ -1.96
CTNNA1-202ENST00000517533 SNCGO76070 127 aa2.82□□□□□ -1.96
CTNNA1-202ENST00000517533 TFF1P04155 84 aa2.82□□□□□ -1.96
CTNNA1-202ENST00000517533 LINC00052Q96N35 136 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms