RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 RPS29P62273 56 aaKnown RBP-3.93□□□□□ -3.04
SNORA40.16-201ENST00000517238 TRAPPC5Q8IUR0 188 aa-3.93□□□□□ -3.04
SNORA40.16-201ENST00000517238 LGALS14Q8TCE9 139 aa-3.93□□□□□ -3.04
SNORA40.16-201ENST00000517238 PPDPFLQ8WWR9 84 aa-3.93□□□□□ -3.04
SNORA40.16-201ENST00000517238 KIAA0232Q92628 1395 aa-3.93□□□□□ -3.04
SNORA40.16-201ENST00000517238 CTXND1A0A1B0GTU2 59 aa-3.94□□□□□ -3.04
SNORA40.16-201ENST00000517238 C5orf58C9J3I9 102 aa-3.94□□□□□ -3.04
SNORA40.16-201ENST00000517238 KPNA4O00629 521 aaPredicted RBP-3.94□□□□□ -3.04
SNORA40.16-201ENST00000517238 TAX1BP3O14907 124 aa-3.94□□□□□ -3.04
SNORA40.16-201ENST00000517238 DAOAP59103 153 aa-3.94□□□□□ -3.04
SNORA40.16-201ENST00000517238 SNRPD2P62316 118 aaKnown RBP-3.94□□□□□ -3.04
SNORA40.16-201ENST00000517238 BTG2P78543 158 aa-3.94□□□□□ -3.04
SNORA40.16-201ENST00000517238 MRPS36P82909 103 aaKnown RBP-3.94□□□□□ -3.04
SNORA40.16-201ENST00000517238 IL18Q14116 193 aa-3.94□□□□□ -3.04
SNORA40.16-201ENST00000517238 NDUFA11Q86Y39 141 aa-3.94□□□□□ -3.04
SNORA40.16-201ENST00000517238 CLEC2BQ92478 149 aa-3.94□□□□□ -3.04
SNORA40.16-201ENST00000517238 ERG28Q9UKR5 140 aa-3.94□□□□□ -3.04
SNORA40.16-201ENST00000517238 NUP155O75694 1391 aa-3.94□□□□□ -3.04
SNORA40.16-201ENST00000517238 CALUO43852 315 aaPredicted RBP-3.95□□□□□ -3.04
SNORA40.16-201ENST00000517238 HLA-DRAP01903 254 aa-3.95□□□□□ -3.04
SNORA40.16-201ENST00000517238 STMN1P16949 149 aa-3.95□□□□□ -3.04
SNORA40.16-201ENST00000517238 ADCYAP1P18509 176 aa-3.95□□□□□ -3.04
SNORA40.16-201ENST00000517238 TMBIM6P55061 237 aa-3.95□□□□□ -3.04
SNORA40.16-201ENST00000517238 ARPP19P56211 112 aa-3.95□□□□□ -3.04
SNORA40.16-201ENST00000517238 SPCS2Q15005 226 aa-3.95□□□□□ -3.04
SNORA40.16-201ENST00000517238 KIAA1143Q96AT1 154 aaPredicted RBP-3.95□□□□□ -3.04
SNORA40.16-201ENST00000517238 C8orf76Q96K31 380 aa-3.95□□□□□ -3.04
SNORA40.16-201ENST00000517238 LINC00846Q9NV44 126 aa-3.95□□□□□ -3.04
SNORA40.16-201ENST00000517238 ASB4Q9Y574 426 aa-3.95□□□□□ -3.04
SNORA40.16-201ENST00000517238 H0Y8G0 127 aa-3.96□□□□□ -3.04
SNORA40.16-201ENST00000517238 CCL22O00626 93 aa-3.96□□□□□ -3.04
SNORA40.16-201ENST00000517238 CST8O60676 142 aa-3.96□□□□□ -3.04
SNORA40.16-201ENST00000517238 IFNA6P05013 189 aa-3.96□□□□□ -3.04
SNORA40.16-201ENST00000517238 ATP6V1E1P36543 226 aa-3.96□□□□□ -3.04
SNORA40.16-201ENST00000517238 CDC34P49427 236 aaPredicted RBP-3.96□□□□□ -3.04
SNORA40.16-201ENST00000517238 SULT1E1P49888 294 aa-3.96□□□□□ -3.04
SNORA40.16-201ENST00000517238 C9orf116Q5BN46 136 aaPredicted RBP-3.96□□□□□ -3.04
SNORA40.16-201ENST00000517238 UQCC1Q9NVA1 299 aa-3.96□□□□□ -3.04
SNORA40.16-201ENST00000517238 TERF2IPQ9NYB0 399 aa-3.96□□□□□ -3.04
SNORA40.16-201ENST00000517238 TVP23BQ9NYZ1 205 aa-3.96□□□□□ -3.04
SNORA40.16-201ENST00000517238 MARF1Q9Y4F3 1742 aaKnown RBP-3.96□□□□□ -3.04
SNORA40.16-201ENST00000517238 N4BP2Q86UW6 1770 aaPredicted RBP-3.97□□□□□ -3.04
SNORA40.16-201ENST00000517238 HIST1H2BKO60814 126 aa-3.97□□□□□ -3.04
SNORA40.16-201ENST00000517238 MT-ND6P03923 174 aa-3.97□□□□□ -3.04
SNORA40.16-201ENST00000517238 CRHP06850 196 aa-3.97□□□□□ -3.04
SNORA40.16-201ENST00000517238 HIST1H2BJP06899 126 aa-3.97□□□□□ -3.04
SNORA40.16-201ENST00000517238 TNP1P09430 55 aa-3.97□□□□□ -3.04
SNORA40.16-201ENST00000517238 PMAIP1Q13794 54 aa-3.97□□□□□ -3.04
SNORA40.16-201ENST00000517238 COX17Q14061 63 aa-3.97□□□□□ -3.04
SNORA40.16-201ENST00000517238 FKBP1CQ5VVH2 108 aa-3.97□□□□□ -3.04
SNORA40.16-201ENST00000517238 Q6Q795 121 aa-3.97□□□□□ -3.04
SNORA40.16-201ENST00000517238 KIAA1107Q9UPP5 1409 aa-3.97□□□□□ -3.05
SNORA40.16-201ENST00000517238 TRAV12-3A0A0B4J271 114 aa-3.98□□□□□ -3.05
SNORA40.16-201ENST00000517238 CXCL11O14625 94 aa-3.98□□□□□ -3.05
SNORA40.16-201ENST00000517238 CXCL1P09341 107 aa-3.98□□□□□ -3.05
SNORA40.16-201ENST00000517238 UCHL3P15374 230 aa-3.98□□□□□ -3.05
SNORA40.16-201ENST00000517238 UBE2G2P60604 165 aa-3.98□□□□□ -3.05
SNORA40.16-201ENST00000517238 FAM45BPQ6NSW5 357 aa-3.98□□□□□ -3.05
SNORA40.16-201ENST00000517238 IFT20Q8IY31 132 aa-3.98□□□□□ -3.05
SNORA40.16-201ENST00000517238 CCDC77Q9BR77 488 aa-3.98□□□□□ -3.05
SNORA40.16-201ENST00000517238 MRPL40Q9NQ50 206 aaKnown RBP-3.98□□□□□ -3.05
SNORA40.16-201ENST00000517238 PTPRGP23470 1445 aa-3.98□□□□□ -3.05
SNORA40.16-201ENST00000517238 ABCC10Q5T3U5 1492 aa-3.98□□□□□ -3.05
SNORA40.16-201ENST00000517238 hCG_1818297A0A087WSY0 165 aa-3.99□□□□□ -3.05
SNORA40.16-201ENST00000517238 SYNJ2BP-COX16A0A087WUM0 186 aa-3.99□□□□□ -3.05
SNORA40.16-201ENST00000517238 ATP6V1G2O95670 118 aa-3.99□□□□□ -3.05
SNORA40.16-201ENST00000517238 PIRTP0C851 137 aa-3.99□□□□□ -3.05
SNORA40.16-201ENST00000517238 SLC25A6P12236 298 aa-3.99□□□□□ -3.05
SNORA40.16-201ENST00000517238 COTL1Q14019 142 aa-3.99□□□□□ -3.05
SNORA40.16-201ENST00000517238 CDRT4Q8N9R6 151 aa-3.99□□□□□ -3.05
SNORA40.16-201ENST00000517238 PHB2Q99623 299 aa-3.99□□□□□ -3.05
SNORA40.16-201ENST00000517238 LRTM1Q9HBL6 345 aa-3.99□□□□□ -3.05
SNORA40.16-201ENST00000517238 HPGDSO60760 199 aa-4□□□□□ -3.05
SNORA40.16-201ENST00000517238 CCL18P55774 89 aa-4□□□□□ -3.05
SNORA40.16-201ENST00000517238 Q3ZCU0 254 aa-4□□□□□ -3.05
SNORA40.16-201ENST00000517238 OR51A4Q8NGJ6 313 aa-4□□□□□ -3.05
SNORA40.16-201ENST00000517238 RAB8BQ92930 207 aa-4□□□□□ -3.05
SNORA40.16-201ENST00000517238 DRC3Q9H069 523 aa-4□□□□□ -3.05
SNORA40.16-201ENST00000517238 CCDC141Q6ZP82 1450 aa-4□□□□□ -3.05
SNORA40.16-201ENST00000517238 WRNQ14191 1432 aaPredicted RBP eCLIP-4.01□□□□□ -3.05
SNORA40.16-201ENST00000517238 FAM223BA6NKX1 122 aa-4.01□□□□□ -3.05
SNORA40.16-201ENST00000517238 EEF1E1-BLOC1S5C9J1V9 151 aa-4.01□□□□□ -3.05
SNORA40.16-201ENST00000517238 GOLGA8KD6RF30 607 aa-4.01□□□□□ -3.05
SNORA40.16-201ENST00000517238 OTCP00480 354 aa-4.01□□□□□ -3.05
SNORA40.16-201ENST00000517238 MGPP08493 103 aa-4.01□□□□□ -3.05
SNORA40.16-201ENST00000517238 CARD18P57730 90 aa-4.01□□□□□ -3.05
SNORA40.16-201ENST00000517238 SCIMPQ6UWF3 145 aa-4.01□□□□□ -3.05
SNORA40.16-201ENST00000517238 ZNF818PQ6ZRF7 136 aa-4.01□□□□□ -3.05
SNORA40.16-201ENST00000517238 STX12Q86Y82 276 aa-4.01□□□□□ -3.05
SNORA40.16-201ENST00000517238 RNASEH2CQ8TDP1 164 aaKnown RBP-4.01□□□□□ -3.05
SNORA40.16-201ENST00000517238 DCUN1D5Q9BTE7 237 aa-4.01□□□□□ -3.05
SNORA40.16-201ENST00000517238 FKBP11Q9NYL4 201 aa-4.01□□□□□ -3.05
SNORA40.16-201ENST00000517238 CLPSL1A2RUU4 121 aa-4.02□□□□□ -3.05
SNORA40.16-201ENST00000517238 CLDN24A6NM45 220 aa-4.02□□□□□ -3.05
SNORA40.16-201ENST00000517238 EVPLLA8MZ36 301 aa-4.02□□□□□ -3.05
SNORA40.16-201ENST00000517238 TNFAIP8O95379 198 aa-4.02□□□□□ -3.05
SNORA40.16-201ENST00000517238 ATP5J2P56134 94 aa-4.02□□□□□ -3.05
SNORA40.16-201ENST00000517238 ATP6V1C2Q8NEY4 427 aa-4.02□□□□□ -3.05
SNORA40.16-201ENST00000517238 PP6455Q8WZ26 134 aa-4.02□□□□□ -3.05
SNORA40.16-201ENST00000517238 AP3S1Q92572 193 aa-4.02□□□□□ -3.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms