RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 FKBP1CQ5VVH2 108 aa-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 KRT222Q8N1A0 295 aa-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 SMIM7Q9BQ49 75 aa-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 ABCC10Q5T3U5 1492 aa-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 USP54Q70EL1 1684 aa-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 NUP210Q8TEM1 1887 aaPredicted RBP-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 KIAA1107Q9UPP5 1409 aa-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 LRP5O75197 1615 aa-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 ALKQ9UM73 1620 aa-2.35□□□□□ -2.79
RNU6-1238P-201ENST00000517215 H0Y8G0 127 aa-2.36□□□□□ -2.79
RNU6-1238P-201ENST00000517215 TAX1BP3O14907 124 aa-2.36□□□□□ -2.79
RNU6-1238P-201ENST00000517215 RPS17P08708 135 aaKnown RBP-2.36□□□□□ -2.79
RNU6-1238P-201ENST00000517215 PIRTP0C851 137 aa-2.36□□□□□ -2.79
RNU6-1238P-201ENST00000517215 STMN1P16949 149 aa-2.36□□□□□ -2.79
RNU6-1238P-201ENST00000517215 ADCYAP1P18509 176 aa-2.36□□□□□ -2.79
RNU6-1238P-201ENST00000517215 SULT1E1P49888 294 aa-2.36□□□□□ -2.79
RNU6-1238P-201ENST00000517215 SNRPD2P62316 118 aaKnown RBP-2.36□□□□□ -2.79
RNU6-1238P-201ENST00000517215 COX17Q14061 63 aa-2.36□□□□□ -2.79
RNU6-1238P-201ENST00000517215 SPCS2Q15005 226 aa-2.36□□□□□ -2.79
RNU6-1238P-201ENST00000517215 DNAL1Q4LDG9 190 aa-2.36□□□□□ -2.79
RNU6-1238P-201ENST00000517215 LYRM7Q5U5X0 104 aa-2.36□□□□□ -2.79
RNU6-1238P-201ENST00000517215 Q6Q795 121 aa-2.36□□□□□ -2.79
RNU6-1238P-201ENST00000517215 TMEM86BQ8N661 226 aa-2.36□□□□□ -2.79
RNU6-1238P-201ENST00000517215 ANKRD29Q8N6D5 301 aa-2.36□□□□□ -2.79
RNU6-1238P-201ENST00000517215 TVP23BQ9NYZ1 205 aa-2.36□□□□□ -2.79
RNU6-1238P-201ENST00000517215 HECW1Q76N89 1606 aa-2.36□□□□□ -2.79
RNU6-1238P-201ENST00000517215 MARF1Q9Y4F3 1742 aaKnown RBP-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 ABCC9O60706 1549 aa-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 ARHGEF12Q9NZN5 1544 aa-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 PARP14Q460N5 1801 aa-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 CLPSL1A2RUU4 121 aa-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 HIST1H2BKO60814 126 aa-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 CRHP06850 196 aa-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 HIST1H2BJP06899 126 aa-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 ARPP19P56211 112 aa-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 UBE2G2P60604 165 aa-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 PMAIP1Q13794 54 aa-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 FAM45BPQ6NSW5 357 aa-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 STX19Q8N4C7 294 aa-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 MGARPQ8TDB4 240 aa-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 CLEC2BQ92478 149 aa-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 C8orf76Q96K31 380 aa-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 PHB2Q99623 299 aa-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 MRPL40Q9NQ50 206 aaKnown RBP-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 ERG28Q9UKR5 140 aa-2.37□□□□□ -2.79
RNU6-1238P-201ENST00000517215 ZNF236Q9UL36 1845 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 CCDC141Q6ZP82 1450 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 hCG_1818297A0A087WSY0 165 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 TRAV12-3A0A0B4J271 114 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 CTXND1A0A1B0GTU2 59 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 TMEM238C9JI98 176 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 K7ERJ3 54 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 IFNA6P05013 189 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 SMIM17P0DL12 118 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 SLC25A6P12236 298 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 UCHL3P15374 230 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 CDC34P49427 236 aaPredicted RBP-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 TMBIM6P55061 237 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 CCL18P55774 89 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 RSU1Q15404 277 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 ALKAL1Q6UXT8 129 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 CDRT4Q8N9R6 151 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 RNASEH2CQ8TDP1 164 aaKnown RBP-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 AP3S1Q92572 193 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 CCDC77Q9BR77 488 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 TERF2IPQ9NYB0 399 aa-2.38□□□□□ -2.79
RNU6-1238P-201ENST00000517215 SHANK2Q9UPX8 1470 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 NCOA3Q9Y6Q9 1424 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 KIF1BO60333 1816 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 MMP24-AS1A0A0U1RRL7 71 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 FAM223BA6NKX1 122 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 CLDN24A6NM45 220 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 C5orf58C9J3I9 102 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 CALUO43852 315 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 BAG2O95816 211 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 CRYGCP07315 174 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 MYL6P60660 151 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 MED21Q13503 144 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 COTL1Q14019 142 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 C1orf195Q5TG92 126 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 SCIMPQ6UWF3 145 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 Q6ZUT4 128 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 PDCL2Q8N4E4 241 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 MCEEQ96PE7 176 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 DRC3Q9H069 523 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 LRTM1Q9HBL6 345 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 MYH7P12883 1935 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 RTL9Q8NET4 1388 aa-2.39□□□□□ -2.79
RNU6-1238P-201ENST00000517215 TRAV2A0A0B4J234 112 aa-2.4□□□□□ -2.79
RNU6-1238P-201ENST00000517215 EEF1E1-BLOC1S5C9J1V9 151 aa-2.4□□□□□ -2.79
RNU6-1238P-201ENST00000517215 HCG22E2RYF7 251 aa-2.4□□□□□ -2.79
RNU6-1238P-201ENST00000517215 MGPP08493 103 aa-2.4□□□□□ -2.79
RNU6-1238P-201ENST00000517215 CST2P09228 141 aa-2.4□□□□□ -2.79
RNU6-1238P-201ENST00000517215 CXCL1P09341 107 aa-2.4□□□□□ -2.79
RNU6-1238P-201ENST00000517215 CARD18P57730 90 aa-2.4□□□□□ -2.79
RNU6-1238P-201ENST00000517215 Q3ZCU0 254 aa-2.4□□□□□ -2.79
RNU6-1238P-201ENST00000517215 DNM1P34Q6PK57 102 aa-2.4□□□□□ -2.79
RNU6-1238P-201ENST00000517215 PP6455Q8WZ26 134 aa-2.4□□□□□ -2.79
RNU6-1238P-201ENST00000517215 DCUN1D5Q9BTE7 237 aa-2.4□□□□□ -2.79
RNU6-1238P-201ENST00000517215 R4GMQ9 66 aa-2.4□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms