RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 ATOH7Q8N100 152 aa-0.55□□□□□ -2.5
SCARNA1-201ENST00000517138 OR52E6Q96RD3 313 aa-0.55□□□□□ -2.5
SCARNA1-201ENST00000517138 TCEAL2Q9H3H9 227 aaPredicted RBP-0.55□□□□□ -2.5
SCARNA1-201ENST00000517138 MRPL27Q9P0M9 148 aaKnown RBP-0.55□□□□□ -2.5
SCARNA1-201ENST00000517138 A0A087X0T9 212 aa-0.56□□□□□ -2.5
SCARNA1-201ENST00000517138 C1orf196B1AJZ1 125 aa-0.56□□□□□ -2.5
SCARNA1-201ENST00000517138 DCTN3O75935 186 aa-0.56□□□□□ -2.5
SCARNA1-201ENST00000517138 CD2P06729 351 aa-0.56□□□□□ -2.5
SCARNA1-201ENST00000517138 PSME3P61289 254 aa-0.56□□□□□ -2.5
SCARNA1-201ENST00000517138 OR2F1Q13607 317 aa-0.56□□□□□ -2.5
SCARNA1-201ENST00000517138 FKBP1CQ5VVH2 108 aa-0.56□□□□□ -2.5
SCARNA1-201ENST00000517138 OR2T35Q8NGX2 323 aa-0.56□□□□□ -2.5
SCARNA1-201ENST00000517138 PTH2Q96A98 100 aa-0.56□□□□□ -2.5
SCARNA1-201ENST00000517138 HIST1H2BLQ99880 126 aa-0.56□□□□□ -2.5
SCARNA1-201ENST00000517138 C20orf27Q9GZN8 174 aa-0.56□□□□□ -2.5
SCARNA1-201ENST00000517138 DSPPQ9NZW4 1301 aa-0.57□□□□□ -2.5
SCARNA1-201ENST00000517138 FXYD6-FXYD2A0A087WZ82 144 aa-0.57□□□□□ -2.5
SCARNA1-201ENST00000517138 FAM236DA0A1B0GTK5 79 aa-0.57□□□□□ -2.5
SCARNA1-201ENST00000517138 M0QX08 132 aa-0.57□□□□□ -2.5
SCARNA1-201ENST00000517138 LYPLA2O95372 231 aa-0.57□□□□□ -2.5
SCARNA1-201ENST00000517138 APODP05090 189 aa-0.57□□□□□ -2.5
SCARNA1-201ENST00000517138 FAM236CP0DP71 79 aa-0.57□□□□□ -2.5
SCARNA1-201ENST00000517138 CD79AP11912 226 aa-0.57□□□□□ -2.5
SCARNA1-201ENST00000517138 INSL3P51460 131 aa-0.57□□□□□ -2.5
SCARNA1-201ENST00000517138 UBE2D1P51668 147 aa-0.57□□□□□ -2.5
SCARNA1-201ENST00000517138 YPEL3P61236 119 aaPredicted RBP-0.57□□□□□ -2.5
SCARNA1-201ENST00000517138 OR52L1Q8NGH7 329 aa-0.57□□□□□ -2.5
SCARNA1-201ENST00000517138 SLAMF6Q96DU3 332 aa-0.57□□□□□ -2.5
SCARNA1-201ENST00000517138 CBLN4Q9NTU7 201 aa-0.57□□□□□ -2.5
SCARNA1-201ENST00000517138 USE1Q9NZ43 259 aa-0.57□□□□□ -2.5
SCARNA1-201ENST00000517138 CYSLTR1Q9Y271 337 aa-0.57□□□□□ -2.5
SCARNA1-201ENST00000517138 TCHHQ07283 1943 aa-0.58□□□□□ -2.5
SCARNA1-201ENST00000517138 IGLV3-32A0A0A0MS00 114 aa-0.58□□□□□ -2.5
SCARNA1-201ENST00000517138 CALB1P05937 261 aa-0.58□□□□□ -2.5
SCARNA1-201ENST00000517138 DYNLT1P63172 113 aa-0.58□□□□□ -2.5
SCARNA1-201ENST00000517138 GLIPR1L1Q6UWM5 242 aa-0.58□□□□□ -2.5
SCARNA1-201ENST00000517138 OR2T10Q8NGZ9 312 aa-0.58□□□□□ -2.5
SCARNA1-201ENST00000517138 PLAC4Q8WY50 150 aa-0.58□□□□□ -2.5
SCARNA1-201ENST00000517138 UQCC1Q9NVA1 299 aa-0.58□□□□□ -2.5
SCARNA1-201ENST00000517138 ERC2-IT1O76042 136 aa-0.59□□□□□ -2.5
SCARNA1-201ENST00000517138 HIST1H1EP10412 219 aaKnown RBP-0.59□□□□□ -2.5
SCARNA1-201ENST00000517138 HIST3H3Q16695 136 aa-0.59□□□□□ -2.5
SCARNA1-201ENST00000517138 NCMAPQ5T1S8 102 aa-0.59□□□□□ -2.5
SCARNA1-201ENST00000517138 UCK1Q9HA47 277 aa-0.59□□□□□ -2.5
SCARNA1-201ENST00000517138 CXorf51AA0A1B0GTR3 108 aa-0.6□□□□□ -2.51
SCARNA1-201ENST00000517138 C9orf92A6NGG3 77 aa-0.6□□□□□ -2.51
SCARNA1-201ENST00000517138 PIRO00625 290 aa-0.6□□□□□ -2.51
SCARNA1-201ENST00000517138 CASP1P29466 404 aa-0.6□□□□□ -2.51
SCARNA1-201ENST00000517138 RPL37P61927 97 aaKnown RBP-0.6□□□□□ -2.51
SCARNA1-201ENST00000517138 CDKL4Q5MAI5 379 aa-0.6□□□□□ -2.51
SCARNA1-201ENST00000517138 ZNF833PQ6ZTB9 187 aa-0.6□□□□□ -2.51
SCARNA1-201ENST00000517138 GPER1Q99527 375 aa-0.6□□□□□ -2.51
SCARNA1-201ENST00000517138 LIMD2Q9BT23 127 aa-0.6□□□□□ -2.51
SCARNA1-201ENST00000517138 FAIMQ9NVQ4 179 aa-0.6□□□□□ -2.51
SCARNA1-201ENST00000517138 IDI2-AS1Q9NZ38 188 aa-0.6□□□□□ -2.51
SCARNA1-201ENST00000517138 FAM236AA0A1B0GUQ0 79 aa-0.61□□□□□ -2.51
SCARNA1-201ENST00000517138 FAM236BA0A1B0GV22 79 aa-0.61□□□□□ -2.51
SCARNA1-201ENST00000517138 CHP2O43745 196 aa-0.61□□□□□ -2.51
SCARNA1-201ENST00000517138 KLK9Q2XQG4 91 aa-0.61□□□□□ -2.51
SCARNA1-201ENST00000517138 C12orf45Q8N5I9 185 aaPredicted RBP-0.61□□□□□ -2.51
SCARNA1-201ENST00000517138 SLC30A7Q8NEW0 376 aa-0.61□□□□□ -2.51
SCARNA1-201ENST00000517138 OR10AC1Q8NH08 325 aa-0.61□□□□□ -2.51
SCARNA1-201ENST00000517138 TP53RKQ96S44 253 aa-0.61□□□□□ -2.51
SCARNA1-201ENST00000517138 PRADC1Q9BSG0 188 aa-0.61□□□□□ -2.51
SCARNA1-201ENST00000517138 TRBV30A0A0K0K1B3 111 aa-0.62□□□□□ -2.51
SCARNA1-201ENST00000517138 IGLV1-51P01701 117 aa-0.62□□□□□ -2.51
SCARNA1-201ENST00000517138 RBP1P09455 135 aa-0.62□□□□□ -2.51
SCARNA1-201ENST00000517138 CCL18P55774 89 aa-0.62□□□□□ -2.51
SCARNA1-201ENST00000517138 KRT222Q8N1A0 295 aa-0.62□□□□□ -2.51
SCARNA1-201ENST00000517138 LLPHQ9BRT6 129 aaKnown RBP-0.62□□□□□ -2.51
SCARNA1-201ENST00000517138 UBE2D4Q9Y2X8 147 aa-0.62□□□□□ -2.51
SCARNA1-201ENST00000517138 SPTY2D1-AS1A0A0U1RR47 76 aa-0.63□□□□□ -2.51
SCARNA1-201ENST00000517138 H3BUX3 64 aa-0.63□□□□□ -2.51
SCARNA1-201ENST00000517138 PITX3O75364 302 aa-0.63□□□□□ -2.51
SCARNA1-201ENST00000517138 CST7O76096 145 aa-0.63□□□□□ -2.51
SCARNA1-201ENST00000517138 RNASE4P34096 147 aaKnown RBP-0.63□□□□□ -2.51
SCARNA1-201ENST00000517138 ANP32AP39687 249 aaKnown RBP-0.63□□□□□ -2.51
SCARNA1-201ENST00000517138 RHOBP62745 196 aa-0.63□□□□□ -2.51
SCARNA1-201ENST00000517138 BLCAPP62952 87 aa-0.63□□□□□ -2.51
SCARNA1-201ENST00000517138 QRFPP83859 136 aa-0.63□□□□□ -2.51
SCARNA1-201ENST00000517138 HRCT1Q6UXD1 115 aa-0.63□□□□□ -2.51
SCARNA1-201ENST00000517138 Q8TAT8 98 aa-0.63□□□□□ -2.51
SCARNA1-201ENST00000517138 NAT14Q8WUY8 206 aa-0.63□□□□□ -2.51
SCARNA1-201ENST00000517138 TMEM138Q9NPI0 162 aa-0.63□□□□□ -2.51
SCARNA1-201ENST00000517138 PCTPQ9UKL6 214 aa-0.63□□□□□ -2.51
SCARNA1-201ENST00000517138 CCDC171Q6TFL3 1326 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 TRBV20-1A0A075B6N2 111 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 A0A0G2JMM0 328 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 LINC00959A0A1B0GUT2 108 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 A0A1B0GW64 132 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 A0A1W2PPB8 328 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 A0A1W2PRS3 328 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 ARL5CA6NH57 179 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 KIR3DP1A8MWS1 328 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 F8W1H4 67 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 H3BRM9 83 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 TIMM17BO60830 172 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 HTN3P15516 51 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 SRIP30626 198 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms