RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 CLRN3Q8NCR9 226 aa6.57□□□□□ -1.36
CLDND1-231ENST00000515620 MRPS26Q9BYN8 205 aaKnown RBP6.57□□□□□ -1.36
CLDND1-231ENST00000515620 OR5AC2Q9NZP5 309 aa6.57□□□□□ -1.36
CLDND1-231ENST00000515620 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.56□□□□□ -1.36
CLDND1-231ENST00000515620 PTTG1O95997 202 aa6.56□□□□□ -1.36
CLDND1-231ENST00000515620 BTCP35070 178 aa6.56□□□□□ -1.36
CLDND1-231ENST00000515620 RPL36AP83881 106 aaKnown RBP6.56□□□□□ -1.36
CLDND1-231ENST00000515620 ZFP69Q49AA0 526 aa6.56□□□□□ -1.36
CLDND1-231ENST00000515620 ARL6IP6Q8N6S5 226 aa6.56□□□□□ -1.36
CLDND1-231ENST00000515620 RPL36ALQ969Q0 106 aaKnown RBP6.56□□□□□ -1.36
CLDND1-231ENST00000515620 CHCHD5Q9BSY4 110 aa6.56□□□□□ -1.36
CLDND1-231ENST00000515620 WDR61Q9GZS3 305 aaKnown RBP6.56□□□□□ -1.36
CLDND1-231ENST00000515620 C17orf112F2Z3M2 114 aa6.55□□□□□ -1.36
CLDND1-231ENST00000515620 H3BMQ9 156 aa6.55□□□□□ -1.36
CLDND1-231ENST00000515620 H3BVH4 76 aa6.55□□□□□ -1.36
CLDND1-231ENST00000515620 SLPIP03973 132 aa6.55□□□□□ -1.36
CLDND1-231ENST00000515620 TMBIM6P55061 237 aa6.55□□□□□ -1.36
CLDND1-231ENST00000515620 SMUG1Q53HV7 270 aa6.55□□□□□ -1.36
CLDND1-231ENST00000515620 TRIQKQ629K1 86 aa6.55□□□□□ -1.36
CLDND1-231ENST00000515620 SPINK6Q6UWN8 80 aa6.55□□□□□ -1.36
CLDND1-231ENST00000515620 LYPD6BQ8NI32 183 aa6.55□□□□□ -1.36
CLDND1-231ENST00000515620 AP5S1Q9NUS5 200 aa6.55□□□□□ -1.36
CLDND1-231ENST00000515620 PRR34Q9NV39 138 aa6.55□□□□□ -1.36
CLDND1-231ENST00000515620 IGLV10-54A0A075B6I4 117 aa6.54□□□□□ -1.36
CLDND1-231ENST00000515620 TRBV7-3A0A075B6L6 115 aa6.54□□□□□ -1.36
CLDND1-231ENST00000515620 IGKV3D-20A0A0C4DH25 116 aa6.54□□□□□ -1.36
CLDND1-231ENST00000515620 MUC21A0A0G2JKD1 596 aa6.54□□□□□ -1.36
CLDND1-231ENST00000515620 LOC100996750A0A140TA64 210 aa6.54□□□□□ -1.36
CLDND1-231ENST00000515620 NOL3O60936 208 aaKnown RBP6.54□□□□□ -1.36
CLDND1-231ENST00000515620 TCRBP04435 133 aa6.54□□□□□ -1.36
CLDND1-231ENST00000515620 S100A5P33763 92 aa6.54□□□□□ -1.36
CLDND1-231ENST00000515620 MAJINQ3KP22 176 aa6.54□□□□□ -1.36
CLDND1-231ENST00000515620 LINC00269Q8N2A0 174 aa6.54□□□□□ -1.36
CLDND1-231ENST00000515620 OR11H4Q8NGC9 324 aa6.54□□□□□ -1.36
CLDND1-231ENST00000515620 SEC22CQ9BRL7 303 aa6.54□□□□□ -1.36
CLDND1-231ENST00000515620 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
CLDND1-231ENST00000515620 IL36BQ9NZH7 164 aa6.54□□□□□ -1.36
CLDND1-231ENST00000515620 PSG8Q9UQ74 426 aa6.54□□□□□ -1.36
CLDND1-231ENST00000515620 IGKV2-24A0A0C4DH68 120 aa6.53□□□□□ -1.36
CLDND1-231ENST00000515620 TRBV10-1A0A0K0K1A3 114 aa6.53□□□□□ -1.36
CLDND1-231ENST00000515620 SERTM2A0A1B0GWG4 89 aa6.53□□□□□ -1.36
CLDND1-231ENST00000515620 PKIAP61925 76 aa6.53□□□□□ -1.36
CLDND1-231ENST00000515620 IL15RAQ13261 267 aa6.53□□□□□ -1.36
CLDND1-231ENST00000515620 PRNTQ86SH4 94 aa6.53□□□□□ -1.36
CLDND1-231ENST00000515620 SCO2A0A1W2PP80 73 aa6.52□□□□□ -1.37
CLDND1-231ENST00000515620 CENPXA8MT69 81 aa6.52□□□□□ -1.37
CLDND1-231ENST00000515620 K7EQM0 130 aa6.52□□□□□ -1.37
CLDND1-231ENST00000515620 TCRAP04437 139 aa6.52□□□□□ -1.37
CLDND1-231ENST00000515620 RBX1P62877 108 aa6.52□□□□□ -1.37
CLDND1-231ENST00000515620 FLI1Q01543 452 aaPredicted RBP6.52□□□□□ -1.37
CLDND1-231ENST00000515620 COX6A2Q02221 97 aa6.52□□□□□ -1.37
CLDND1-231ENST00000515620 PQLC2Q6ZP29 291 aa6.52□□□□□ -1.37
CLDND1-231ENST00000515620 STPG4Q8N801 248 aa6.52□□□□□ -1.37
CLDND1-231ENST00000515620 C5orf17Q8NAS9 161 aa6.52□□□□□ -1.37
CLDND1-231ENST00000515620 MUC2Q02817 5179 aa6.52□□□□□ -1.37
CLDND1-231ENST00000515620 B4DEV8 164 aa6.51□□□□□ -1.37
CLDND1-231ENST00000515620 M0R381 172 aa6.51□□□□□ -1.37
CLDND1-231ENST00000515620 HMGB3O15347 200 aaKnown RBP6.51□□□□□ -1.37
CLDND1-231ENST00000515620 ARMS2P0C7Q2 107 aa6.51□□□□□ -1.37
CLDND1-231ENST00000515620 GAGE6Q13070 117 aa6.51□□□□□ -1.37
CLDND1-231ENST00000515620 SFRP2Q96HF1 295 aa6.51□□□□□ -1.37
CLDND1-231ENST00000515620 FAT4Q6V0I7 4981 aa6.51□□□□□ -1.37
CLDND1-231ENST00000515620 TRAV6A0A075B6T7 132 aa6.5□□□□□ -1.37
CLDND1-231ENST00000515620 H7C1H1 209 aa6.5□□□□□ -1.37
CLDND1-231ENST00000515620 M0R036 132 aa6.5□□□□□ -1.37
CLDND1-231ENST00000515620 NDUFS6O75380 124 aaKnown RBP6.5□□□□□ -1.37
CLDND1-231ENST00000515620 RAB5CP51148 216 aa6.5□□□□□ -1.37
CLDND1-231ENST00000515620 REG3AQ06141 175 aa6.5□□□□□ -1.37
CLDND1-231ENST00000515620 SRSF9Q13242 221 aaKnown RBP eCLIP6.5□□□□□ -1.37
CLDND1-231ENST00000515620 CNPY1Q3B7I2 92 aa6.5□□□□□ -1.37
CLDND1-231ENST00000515620 NEXN-AS1Q8NBZ9 246 aa6.5□□□□□ -1.37
CLDND1-231ENST00000515620 OR10G8Q8NGN5 311 aa6.5□□□□□ -1.37
CLDND1-231ENST00000515620 PRSS3P2Q8NHM4 247 aa6.5□□□□□ -1.37
CLDND1-231ENST00000515620 ANAPC16Q96DE5 110 aa6.5□□□□□ -1.37
CLDND1-231ENST00000515620 VAX2Q9UIW0 290 aa6.5□□□□□ -1.37
CLDND1-231ENST00000515620 PHLDA3Q9Y5J5 127 aa6.5□□□□□ -1.37
CLDND1-231ENST00000515620 A0A1W2PPV4 95 aa6.49□□□□□ -1.37
CLDND1-231ENST00000515620 GRIFINA4D1Z8 144 aa6.49□□□□□ -1.37
CLDND1-231ENST00000515620 ARL14EPLP0DKL9 152 aa6.49□□□□□ -1.37
CLDND1-231ENST00000515620 ZNF56Q15929 161 aa6.49□□□□□ -1.37
CLDND1-231ENST00000515620 SAPCD1Q5SSQ6 148 aa6.49□□□□□ -1.37
CLDND1-231ENST00000515620 NTM-AS1Q6ZSK4 140 aa6.49□□□□□ -1.37
CLDND1-231ENST00000515620 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.49□□□□□ -1.37
CLDND1-231ENST00000515620 FAM231BA6NCW3 169 aa6.48□□□□□ -1.37
CLDND1-231ENST00000515620 FABP5P3A8MUU1 101 aa6.48□□□□□ -1.37
CLDND1-231ENST00000515620 TPT1P13693 172 aaKnown RBP6.48□□□□□ -1.37
CLDND1-231ENST00000515620 RAB2AP61019 212 aa6.48□□□□□ -1.37
CLDND1-231ENST00000515620 LRRC37A5PQ49AS3 106 aa6.48□□□□□ -1.37
CLDND1-231ENST00000515620 SCGB1C1Q8TD33 95 aa6.48□□□□□ -1.37
CLDND1-231ENST00000515620 NUDT15Q9NV35 164 aa6.48□□□□□ -1.37
CLDND1-231ENST00000515620 A0A096LNI7 61 aa6.47□□□□□ -1.37
CLDND1-231ENST00000515620 TRAV34A0A0B4J273 112 aa6.47□□□□□ -1.37
CLDND1-231ENST00000515620 KRBOX1C9JBD0 128 aa6.47□□□□□ -1.37
CLDND1-231ENST00000515620 RPS10P46783 165 aaKnown RBP6.47□□□□□ -1.37
CLDND1-231ENST00000515620 DNLZQ5SXM8 178 aa6.47□□□□□ -1.37
CLDND1-231ENST00000515620 Q6ZRP5 223 aa6.47□□□□□ -1.37
CLDND1-231ENST00000515620 ZFP82Q8N141 532 aa6.47□□□□□ -1.37
CLDND1-231ENST00000515620 C15orf56Q8N910 161 aa6.47□□□□□ -1.37
CLDND1-231ENST00000515620 SDHCQ99643 169 aaPredicted RBP6.47□□□□□ -1.37
CLDND1-231ENST00000515620 EPDR1Q9UM22 224 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms