RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 CRYGDP07320 174 aa8.29□□□□□ -1.08
SNF8-215ENST00000515572 FOXA3P55318 350 aaPredicted RBP8.29□□□□□ -1.08
SNF8-215ENST00000515572 RHOHQ15669 191 aa8.29□□□□□ -1.08
SNF8-215ENST00000515572 MRPL23Q16540 153 aaKnown RBP8.29□□□□□ -1.08
SNF8-215ENST00000515572 RNF212Q495C1 297 aa8.29□□□□□ -1.08
SNF8-215ENST00000515572 FAM74A4Q5TZK3 123 aa8.29□□□□□ -1.08
SNF8-215ENST00000515572 COMMD7Q86VX2 200 aa8.29□□□□□ -1.08
SNF8-215ENST00000515572 SLC25A29Q8N8R3 303 aa8.29□□□□□ -1.08
SNF8-215ENST00000515572 TSKUQ8WUA8 353 aa8.29□□□□□ -1.08
SNF8-215ENST00000515572 GTSF1Q8WW33 167 aa8.29□□□□□ -1.08
SNF8-215ENST00000515572 SAMD10Q9BYL1 202 aa8.29□□□□□ -1.08
SNF8-215ENST00000515572 JPT2Q9H910 190 aa8.29□□□□□ -1.08
SNF8-215ENST00000515572 A0A096LPF7 62 aa8.28□□□□□ -1.08
SNF8-215ENST00000515572 MUC21A0A0G2JKD1 596 aa8.28□□□□□ -1.08
SNF8-215ENST00000515572 MUC21A0A140T8X8 626 aa8.28□□□□□ -1.08
SNF8-215ENST00000515572 TMEM218A2RU14 115 aa8.28□□□□□ -1.08
SNF8-215ENST00000515572 SMIM17P0DL12 118 aa8.28□□□□□ -1.08
SNF8-215ENST00000515572 CCL18P55774 89 aa8.28□□□□□ -1.08
SNF8-215ENST00000515572 FAM3BP58499 235 aaPredicted RBP8.28□□□□□ -1.08
SNF8-215ENST00000515572 SH2D6Q7Z4S9 175 aa8.28□□□□□ -1.08
SNF8-215ENST00000515572 UBE2DNLQ8IWF7 75 aa8.28□□□□□ -1.08
SNF8-215ENST00000515572 BORCS7Q96B45 105 aa8.28□□□□□ -1.08
SNF8-215ENST00000515572 V9GYV3 84 aa8.28□□□□□ -1.08
SNF8-215ENST00000515572 PPP1R2P9O14990 202 aa8.27□□□□□ -1.09
SNF8-215ENST00000515572 TRGC1P0CF51 173 aa8.27□□□□□ -1.09
SNF8-215ENST00000515572 GYPEP15421 78 aa8.27□□□□□ -1.09
SNF8-215ENST00000515572 NTF3P20783 257 aa8.27□□□□□ -1.09
SNF8-215ENST00000515572 SRIP30626 198 aa8.27□□□□□ -1.09
SNF8-215ENST00000515572 RAB4BP61018 213 aa8.27□□□□□ -1.09
SNF8-215ENST00000515572 SSTP61278 116 aa8.27□□□□□ -1.09
SNF8-215ENST00000515572 HIGD1CA8MV81 97 aa8.26□□□□□ -1.09
SNF8-215ENST00000515572 K7EQD1 137 aa8.26□□□□□ -1.09
SNF8-215ENST00000515572 TWIST1Q15672 202 aa8.26□□□□□ -1.09
SNF8-215ENST00000515572 ZNF56Q15929 161 aa8.26□□□□□ -1.09
SNF8-215ENST00000515572 NEGR1Q7Z3B1 354 aa8.26□□□□□ -1.09
SNF8-215ENST00000515572 C14orf178Q8N769 122 aaPredicted RBP8.26□□□□□ -1.09
SNF8-215ENST00000515572 PGLYRP4Q96LB8 373 aa8.26□□□□□ -1.09
SNF8-215ENST00000515572 MSRB1Q9NZV6 116 aa8.26□□□□□ -1.09
SNF8-215ENST00000515572 KIF25-AS1Q9Y6Z4 181 aa8.26□□□□□ -1.09
SNF8-215ENST00000515572 TRBV10-1A0A0K0K1A3 114 aa8.25□□□□□ -1.09
SNF8-215ENST00000515572 F8W036 122 aa8.25□□□□□ -1.09
SNF8-215ENST00000515572 MT-ND4LP03901 98 aa8.25□□□□□ -1.09
SNF8-215ENST00000515572 Q6ZSN1 163 aa8.25□□□□□ -1.09
SNF8-215ENST00000515572 SEC11CQ9BY50 192 aa8.25□□□□□ -1.09
SNF8-215ENST00000515572 DPH3P1Q9H4G8 78 aa8.25□□□□□ -1.09
SNF8-215ENST00000515572 NAT8BQ9UHF3 227 aa8.25□□□□□ -1.09
SNF8-215ENST00000515572 LOC100131303A0A0U1RQF7 123 aa8.24□□□□□ -1.09
SNF8-215ENST00000515572 A0A1B0GUT8 65 aa8.24□□□□□ -1.09
SNF8-215ENST00000515572 SMIM27A0A1W2PRY6 76 aa8.24□□□□□ -1.09
SNF8-215ENST00000515572 F5H697 171 aa8.24□□□□□ -1.09
SNF8-215ENST00000515572 ADCYAP1P18509 176 aa8.24□□□□□ -1.09
SNF8-215ENST00000515572 ESRGQ1W209 222 aa8.24□□□□□ -1.09
SNF8-215ENST00000515572 SMIM15Q7Z3B0 74 aa8.24□□□□□ -1.09
SNF8-215ENST00000515572 ANAPC16Q96DE5 110 aa8.24□□□□□ -1.09
SNF8-215ENST00000515572 LINC00588Q9Y4M8 146 aa8.24□□□□□ -1.09
SNF8-215ENST00000515572 ALMS1Q8TCU4 4167 aa8.23□□□□□ -1.09
SNF8-215ENST00000515572 H7C1H1 209 aa8.23□□□□□ -1.09
SNF8-215ENST00000515572 EVI2AP22794 236 aa8.23□□□□□ -1.09
SNF8-215ENST00000515572 LINC00315P59091 139 aa8.23□□□□□ -1.09
SNF8-215ENST00000515572 RIGQ13278 110 aa8.23□□□□□ -1.09
SNF8-215ENST00000515572 LYPD5Q6UWN5 251 aa8.23□□□□□ -1.09
SNF8-215ENST00000515572 NUP35Q8NFH5 326 aa8.23□□□□□ -1.09
SNF8-215ENST00000515572 MRPS16Q9Y3D3 137 aaKnown RBP8.23□□□□□ -1.09
SNF8-215ENST00000515572 MGPP08493 103 aa8.22□□□□□ -1.09
SNF8-215ENST00000515572 TIRAPP58753 221 aa8.22□□□□□ -1.09
SNF8-215ENST00000515572 UPK3BQ9BT76 320 aa8.22□□□□□ -1.09
SNF8-215ENST00000515572 PLECQ15149 4684 aaKnown RBP8.21□□□□□ -1.09
SNF8-215ENST00000515572 TRBV7-3A0A075B6L6 115 aa8.21□□□□□ -1.1
SNF8-215ENST00000515572 A0A1B0GW15 77 aa8.21□□□□□ -1.1
SNF8-215ENST00000515572 GAGE12JA6NER3 117 aa8.21□□□□□ -1.1
SNF8-215ENST00000515572 LINC00694P0DN24 101 aa8.21□□□□□ -1.1
SNF8-215ENST00000515572 RPL36AP83881 106 aaKnown RBP8.21□□□□□ -1.1
SNF8-215ENST00000515572 GAGE1Q13065 139 aa8.21□□□□□ -1.1
SNF8-215ENST00000515572 GAGE4Q13068 117 aa8.21□□□□□ -1.1
SNF8-215ENST00000515572 GAGE5Q13069 117 aa8.21□□□□□ -1.1
SNF8-215ENST00000515572 GAGE13Q4V321 117 aa8.21□□□□□ -1.1
SNF8-215ENST00000515572 C10orf91Q5T1B1 145 aa8.21□□□□□ -1.1
SNF8-215ENST00000515572 ATP6V0E2Q8NHE4 81 aa8.21□□□□□ -1.1
SNF8-215ENST00000515572 ZNRF2Q8NHG8 242 aa8.21□□□□□ -1.1
SNF8-215ENST00000515572 RPL36ALQ969Q0 106 aaKnown RBP8.21□□□□□ -1.1
SNF8-215ENST00000515572 CARHSP1Q9Y2V2 147 aaKnown RBP8.21□□□□□ -1.1
SNF8-215ENST00000515572 FRZBQ92765 325 aa8.2□□□□□ -1.1
SNF8-215ENST00000515572 TMEM191AQ9H0A3 160 aa8.2□□□□□ -1.1
SNF8-215ENST00000515572 DNAH1Q9P2D7 4330 aa8.19□□□□□ -1.1
SNF8-215ENST00000515572 M0QY20 66 aa8.19□□□□□ -1.1
SNF8-215ENST00000515572 S100A8P05109 93 aa8.19□□□□□ -1.1
SNF8-215ENST00000515572 SUMO4Q6EEV6 95 aa8.19□□□□□ -1.1
SNF8-215ENST00000515572 DNAJC30Q96LL9 226 aa8.19□□□□□ -1.1
SNF8-215ENST00000515572 CTDSP1Q9GZU7 261 aa8.19□□□□□ -1.1
SNF8-215ENST00000515572 GTSF1LQ9H1H1 148 aa8.19□□□□□ -1.1
SNF8-215ENST00000515572 Q9UF83 564 aa8.19□□□□□ -1.1
SNF8-215ENST00000515572 KMT2CQ8NEZ4 4911 aaKnown RBP8.18□□□□□ -1.1
SNF8-215ENST00000515572 A0A087WWC5 75 aa8.18□□□□□ -1.1
SNF8-215ENST00000515572 UBE2D3P61077 147 aa8.18□□□□□ -1.1
SNF8-215ENST00000515572 UBE2D2P62837 147 aa8.18□□□□□ -1.1
SNF8-215ENST00000515572 NDUFA5Q16718 116 aa8.18□□□□□ -1.1
SNF8-215ENST00000515572 RASL11AQ6T310 242 aa8.18□□□□□ -1.1
SNF8-215ENST00000515572 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.18□□□□□ -1.1
SNF8-215ENST00000515572 NEXN-AS1Q8NBZ9 246 aa8.18□□□□□ -1.1
SNF8-215ENST00000515572 IMMP2LQ96T52 175 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms