RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 DYSFO75923 2080 aa12.44□□□□□ -0.42
TRIM41-207ENST00000515223 C16orf54Q6UWD8 224 aa12.44□□□□□ -0.42
TRIM41-207ENST00000515223 ESM1Q9NQ30 184 aa12.44□□□□□ -0.42
TRIM41-207ENST00000515223 DKK2Q9UBU2 259 aa12.43□□□□□ -0.42
TRIM41-207ENST00000515223 PTPN13Q12923 2485 aa12.43□□□□□ -0.42
TRIM41-207ENST00000515223 FUSP35637 526 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRIM41-207ENST00000515223 FBXL19-AS1Q494R0 122 aa12.43□□□□□ -0.42
TRIM41-207ENST00000515223 TIMM17AQ99595 171 aa12.43□□□□□ -0.42
TRIM41-207ENST00000515223 C4orf3Q8WVX3 66 aa12.43□□□□□ -0.42
TRIM41-207ENST00000515223 CSPG4Q6UVK1 2322 aa12.43□□□□□ -0.42
TRIM41-207ENST00000515223 K7EIM0 57 aa12.42□□□□□ -0.42
TRIM41-207ENST00000515223 A0A1W2PPM0 123 aa12.42□□□□□ -0.42
TRIM41-207ENST00000515223 I3L2K1 104 aa12.42□□□□□ -0.42
TRIM41-207ENST00000515223 IGFBPL1Q8WX77 278 aa12.42□□□□□ -0.42
TRIM41-207ENST00000515223 HHLA3Q9XRX5 114 aa12.42□□□□□ -0.42
TRIM41-207ENST00000515223 CTSGP08311 255 aa12.42□□□□□ -0.42
TRIM41-207ENST00000515223 UBE2AP49459 152 aa12.42□□□□□ -0.42
TRIM41-207ENST00000515223 GPHB5Q86YW7 130 aa12.42□□□□□ -0.42
TRIM41-207ENST00000515223 CITED2Q99967 270 aaPredicted RBP12.42□□□□□ -0.42
TRIM41-207ENST00000515223 TRAV12-1A0A0B4J245 112 aa12.42□□□□□ -0.42
TRIM41-207ENST00000515223 ZFP36P26651 326 aaKnown RBP12.41□□□□□ -0.42
TRIM41-207ENST00000515223 LOXL1Q08397 574 aaPredicted RBP12.41□□□□□ -0.42
TRIM41-207ENST00000515223 ETDBQ3ZM63 59 aa12.41□□□□□ -0.42
TRIM41-207ENST00000515223 NDUFA1O15239 70 aa12.41□□□□□ -0.42
TRIM41-207ENST00000515223 CARD19Q96LW7 228 aa12.41□□□□□ -0.42
TRIM41-207ENST00000515223 FANCD2OSQ96PS1 177 aa12.41□□□□□ -0.42
TRIM41-207ENST00000515223 TINCRA0A1B0GVN0 87 aa12.4□□□□□ -0.42
TRIM41-207ENST00000515223 PPDPFLQ8WWR9 84 aa12.4□□□□□ -0.42
TRIM41-207ENST00000515223 YPEL4Q96NS1 127 aa12.4□□□□□ -0.42
TRIM41-207ENST00000515223 HIST2H2BCQ6DN03 193 aa12.4□□□□□ -0.42
TRIM41-207ENST00000515223 IGLL5B9A064 214 aa12.4□□□□□ -0.42
TRIM41-207ENST00000515223 NDUFB1O75438 58 aa12.4□□□□□ -0.42
TRIM41-207ENST00000515223 LRRC75A-AS1Q8N1F1 130 aa12.4□□□□□ -0.42
TRIM41-207ENST00000515223 NACAE9PAV3 2078 aa12.4□□□□□ -0.42
TRIM41-207ENST00000515223 IGHG2P01859 326 aa12.4□□□□□ -0.43
TRIM41-207ENST00000515223 ZNF295-AS1Q8N0V1 137 aa12.4□□□□□ -0.43
TRIM41-207ENST00000515223 ZNF747Q9BV97 191 aa12.4□□□□□ -0.43
TRIM41-207ENST00000515223 PCP2Q8IVA1 136 aa12.39□□□□□ -0.43
TRIM41-207ENST00000515223 SPANXDQ9BXN6 97 aa12.39□□□□□ -0.43
TRIM41-207ENST00000515223 ORMDL1Q9P0S3 153 aa12.39□□□□□ -0.43
TRIM41-207ENST00000515223 PCNX3Q9H6A9 2034 aa12.39□□□□□ -0.43
TRIM41-207ENST00000515223 IGKV1-17P01599 117 aa12.39□□□□□ -0.43
TRIM41-207ENST00000515223 C2orf16Q68DN1 1984 aa12.39□□□□□ -0.43
TRIM41-207ENST00000515223 MYO18BQ8IUG5 2567 aa12.39□□□□□ -0.43
TRIM41-207ENST00000515223 DEFB125Q8N687 156 aa12.38□□□□□ -0.43
TRIM41-207ENST00000515223 IGHV4-4A0A075B6R2 117 aa12.38□□□□□ -0.43
TRIM41-207ENST00000515223 H3BMG7 143 aa12.37□□□□□ -0.43
TRIM41-207ENST00000515223 DNAJC9-AS1A6NH13 148 aa12.37□□□□□ -0.43
TRIM41-207ENST00000515223 C9orf153Q5TBE3 101 aa12.37□□□□□ -0.43
TRIM41-207ENST00000515223 C15orf53Q8NAA6 179 aa12.37□□□□□ -0.43
TRIM41-207ENST00000515223 EML6Q6ZMW3 1958 aa12.37□□□□□ -0.43
TRIM41-207ENST00000515223 CEND1Q8N111 149 aa12.37□□□□□ -0.43
TRIM41-207ENST00000515223 TRBV7-3A0A075B6L6 115 aa12.36□□□□□ -0.43
TRIM41-207ENST00000515223 PATE2Q6UY27 113 aa12.36□□□□□ -0.43
TRIM41-207ENST00000515223 PRSS47A8MTI9 375 aa12.36□□□□□ -0.43
TRIM41-207ENST00000515223 NCOA6Q14686 2063 aaPredicted RBP12.36□□□□□ -0.43
TRIM41-207ENST00000515223 DEFB4AO15263 64 aa12.36□□□□□ -0.43
TRIM41-207ENST00000515223 SPRY2O43597 315 aa12.36□□□□□ -0.43
TRIM41-207ENST00000515223 RITA1Q96K30 269 aa12.36□□□□□ -0.43
TRIM41-207ENST00000515223 IFITM1P13164 125 aa12.35□□□□□ -0.43
TRIM41-207ENST00000515223 SEM1Q6ZVN7 128 aa12.35□□□□□ -0.43
TRIM41-207ENST00000515223 PRORYQ9H606 182 aa12.35□□□□□ -0.43
TRIM41-207ENST00000515223 Q8N1Y9 231 aa12.35□□□□□ -0.43
TRIM41-207ENST00000515223 C14orf177Q52M58 125 aa12.34□□□□□ -0.43
TRIM41-207ENST00000515223 ANKRD39Q53RE8 183 aa12.34□□□□□ -0.43
TRIM41-207ENST00000515223 Q8N7P7 452 aa12.34□□□□□ -0.43
TRIM41-207ENST00000515223 GTSF1Q8WW33 167 aa12.34□□□□□ -0.43
TRIM41-207ENST00000515223 SIRPDQ9H106 197 aa12.34□□□□□ -0.43
TRIM41-207ENST00000515223 NDUFA11Q86Y39 141 aa12.34□□□□□ -0.43
TRIM41-207ENST00000515223 IGLV1-47P01700 117 aa12.34□□□□□ -0.43
TRIM41-207ENST00000515223 C11orf45Q8TAV5 145 aa12.34□□□□□ -0.43
TRIM41-207ENST00000515223 SND1-IT1Q9HBX3 110 aa12.34□□□□□ -0.43
TRIM41-207ENST00000515223 PRO0255Q9UI72 69 aa12.34□□□□□ -0.43
TRIM41-207ENST00000515223 KLK12Q9UKR0 248 aa12.34□□□□□ -0.43
TRIM41-207ENST00000515223 F8W1H4 67 aa12.34□□□□□ -0.43
TRIM41-207ENST00000515223 COX7B2Q8TF08 81 aa12.34□□□□□ -0.43
TRIM41-207ENST00000515223 RNF183Q96D59 192 aa12.34□□□□□ -0.43
TRIM41-207ENST00000515223 SPRY4Q9C004 299 aa12.33□□□□□ -0.44
TRIM41-207ENST00000515223 CXCL5P42830 114 aa12.33□□□□□ -0.44
TRIM41-207ENST00000515223 RPL39LQ96EH5 51 aaKnown RBP12.33□□□□□ -0.44
TRIM41-207ENST00000515223 FAM167A-AS1Q96KT0 104 aa12.33□□□□□ -0.44
TRIM41-207ENST00000515223 OPRPNQ99935 248 aaPredicted RBP12.33□□□□□ -0.44
TRIM41-207ENST00000515223 ANKHD1Q8IWZ3 2542 aaKnown RBP12.33□□□□□ -0.44
TRIM41-207ENST00000515223 TNFRSF13BO14836 293 aaPredicted RBP12.33□□□□□ -0.44
TRIM41-207ENST00000515223 CFC1BP0CG36 223 aa12.33□□□□□ -0.44
TRIM41-207ENST00000515223 CFC1P0CG37 223 aa12.33□□□□□ -0.44
TRIM41-207ENST00000515223 GATA1P15976 413 aaPredicted RBP12.33□□□□□ -0.44
TRIM41-207ENST00000515223 TMEM61Q8N0U2 210 aa12.33□□□□□ -0.44
TRIM41-207ENST00000515223 A6NDX4 124 aa12.32□□□□□ -0.44
TRIM41-207ENST00000515223 H0YGX0 51 aa12.32□□□□□ -0.44
TRIM41-207ENST00000515223 Q8NA96 180 aa12.32□□□□□ -0.44
TRIM41-207ENST00000515223 VSIG2Q96IQ7 327 aa12.32□□□□□ -0.44
TRIM41-207ENST00000515223 GAGE12HA6NDE8 117 aa12.32□□□□□ -0.44
TRIM41-207ENST00000515223 SIVA1O15304 175 aa12.32□□□□□ -0.44
TRIM41-207ENST00000515223 TRACP01848 142 aa12.32□□□□□ -0.44
TRIM41-207ENST00000515223 TAX1BP3O14907 124 aa12.32□□□□□ -0.44
TRIM41-207ENST00000515223 TMEM131Q92545 1883 aa12.32□□□□□ -0.44
TRIM41-207ENST00000515223 TP73-AS1Q9UF72 201 aa12.32□□□□□ -0.44
TRIM41-207ENST00000515223 BAALC-AS2P0C853 105 aa12.32□□□□□ -0.44
TRIM41-207ENST00000515223 SPAG11BQ08648 103 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms