RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 HBBP68871 147 aa3.29□□□□□ -1.88
CLDND1-228ENST00000513873 FABP9Q0Z7S8 132 aa3.29□□□□□ -1.88
CLDND1-228ENST00000513873 NDUFA11Q86Y39 141 aa3.29□□□□□ -1.88
CLDND1-228ENST00000513873 OR8A1Q8NGG7 326 aa3.29□□□□□ -1.88
CLDND1-228ENST00000513873 LINC01006Q8NI28 216 aa3.29□□□□□ -1.88
CLDND1-228ENST00000513873 KCNS1Q96KK3 526 aa3.29□□□□□ -1.88
CLDND1-228ENST00000513873 YPEL4Q96NS1 127 aa3.29□□□□□ -1.88
CLDND1-228ENST00000513873 SPAG8Q99932 426 aaPredicted RBP3.29□□□□□ -1.88
CLDND1-228ENST00000513873 GPR61Q9BZJ8 451 aa3.29□□□□□ -1.88
CLDND1-228ENST00000513873 MS4A6AQ9H2W1 248 aa3.29□□□□□ -1.88
CLDND1-228ENST00000513873 ZMAT5Q9UDW3 170 aaKnown RBP3.29□□□□□ -1.88
CLDND1-228ENST00000513873 EPPK1P58107 5090 aaKnown RBP3.29□□□□□ -1.88
CLDND1-228ENST00000513873 IGKV2-40A0A087WW87 121 aaPredicted RBP3.28□□□□□ -1.88
CLDND1-228ENST00000513873 TRAV8-1A0A0A6YYK1 113 aa3.28□□□□□ -1.88
CLDND1-228ENST00000513873 TMEM213A2RRL7 107 aa3.28□□□□□ -1.88
CLDND1-228ENST00000513873 SH2D1AO60880 128 aa3.28□□□□□ -1.88
CLDND1-228ENST00000513873 IGKV2D-40P01614 121 aaPredicted RBP3.28□□□□□ -1.88
CLDND1-228ENST00000513873 TRGC2P03986 189 aa3.28□□□□□ -1.88
CLDND1-228ENST00000513873 CRISP2P16562 243 aa3.28□□□□□ -1.88
CLDND1-228ENST00000513873 S100A4P26447 101 aaKnown RBP3.28□□□□□ -1.88
CLDND1-228ENST00000513873 INSL3P51460 131 aa3.28□□□□□ -1.88
CLDND1-228ENST00000513873 NDUFA6P56556 154 aa3.28□□□□□ -1.88
CLDND1-228ENST00000513873 CACNG7P62955 275 aa3.28□□□□□ -1.88
CLDND1-228ENST00000513873 SRSF9Q13242 221 aaKnown RBP eCLIP3.28□□□□□ -1.88
CLDND1-228ENST00000513873 ACTL10Q5JWF8 245 aa3.28□□□□□ -1.88
CLDND1-228ENST00000513873 FOXI2Q6ZQN5 318 aa3.28□□□□□ -1.88
CLDND1-228ENST00000513873 ZFP82Q8N141 532 aa3.28□□□□□ -1.88
CLDND1-228ENST00000513873 FER1L6-AS1Q8NA97 138 aa3.28□□□□□ -1.88
CLDND1-228ENST00000513873 NHLRC2Q8NBF2 726 aa3.28□□□□□ -1.88
CLDND1-228ENST00000513873 NUP35Q8NFH5 326 aa3.28□□□□□ -1.88
CLDND1-228ENST00000513873 ZC2HC1AQ96GY0 325 aa3.28□□□□□ -1.88
CLDND1-228ENST00000513873 OVOL2Q9BRP0 275 aa3.28□□□□□ -1.88
CLDND1-228ENST00000513873 STAB2Q8WWQ8 2551 aa3.28□□□□□ -1.88
CLDND1-228ENST00000513873 IGKV3-7A0A075B6H7 116 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 TRAV8-2A0A0B4J237 113 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 ZNF705FA8MVS1 300 aaPredicted RBP3.27□□□□□ -1.89
CLDND1-228ENST00000513873 K7EQG2 157 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 PPP1R17O96001 155 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 PPBPP02775 128 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 TRGC1P0CF51 173 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 CD28P10747 220 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 GATA1P15976 413 aaPredicted RBP3.27□□□□□ -1.89
CLDND1-228ENST00000513873 RAB4AP20338 218 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 ASIPP42127 132 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 AKR1D1P51857 326 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 TCL1AP56279 114 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 OR10J3Q5JRS4 329 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 PSMG4Q5JS54 123 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 MRPL54Q6P161 138 aaKnown RBP3.27□□□□□ -1.89
CLDND1-228ENST00000513873 FAM159AQ6UWV7 190 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 BAGE3Q86Y29 109 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 RNF182Q8N6D2 247 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 DCANP1Q8TF63 244 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 PGLYRP4Q96LB8 373 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 CITED2Q99967 270 aaPredicted RBP3.27□□□□□ -1.89
CLDND1-228ENST00000513873 C20orf144Q9BQM9 153 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 TPPP3Q9BW30 176 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 AGPAT4-IT1Q9H0P7 198 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 ESM1Q9NQ30 184 aa3.27□□□□□ -1.89
CLDND1-228ENST00000513873 TENM2Q9NT68 2774 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 A0A087WZ39 114 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 C5orf52A6NGY3 159 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 K7EQD1 137 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 HIST1H2BKO60814 126 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 SAP30O75446 220 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 HIST1H2BJP06899 126 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 ZNF688P0C7X2 276 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 SMIM17P0DL12 118 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 HIST1H2BOP23527 126 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 G0S2P27469 103 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 HIST1H2BBP33778 126 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 RNASE4P34096 147 aaKnown RBP3.26□□□□□ -1.89
CLDND1-228ENST00000513873 CDKN1BP46527 198 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 TFPI2P48307 235 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 HIST1H2BDP58876 126 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 HIST1H2BCP62807 126 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 Q0VG73 95 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 ERCC8Q13216 396 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 HIST2H2BEQ16778 126 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 DEFB114Q30KQ6 69 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.26□□□□□ -1.89
CLDND1-228ENST00000513873 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 SPANXN1Q5VSR9 72 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 C10orf99Q6UWK7 81 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 PET117Q6UWS5 81 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 STHQ8IWL8 128 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 Q8TAT8 98 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 DLX4Q92988 240 aaPredicted RBP3.26□□□□□ -1.89
CLDND1-228ENST00000513873 HIST1H2BHQ93079 126 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 PACRGQ96M98 296 aaPredicted RBP3.26□□□□□ -1.89
CLDND1-228ENST00000513873 HIST1H2BNQ99877 126 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 HIST1H2BMQ99879 126 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 CHCHD5Q9BSY4 110 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 LAMTOR2Q9Y2Q5 125 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 PHLDA3Q9Y5J5 127 aa3.26□□□□□ -1.89
CLDND1-228ENST00000513873 DOCK11Q5JSL3 2073 aa3.25□□□□□ -1.89
CLDND1-228ENST00000513873 A0A0J9YX75 114 aa3.25□□□□□ -1.89
CLDND1-228ENST00000513873 LOC105371267A0A1B0GV96 52 aa3.25□□□□□ -1.89
CLDND1-228ENST00000513873 A0A1B0GXF2 115 aa3.25□□□□□ -1.89
CLDND1-228ENST00000513873 C7orf71A4D174 169 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms