RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 ZFP69Q49AA0 526 aa6.56□□□□□ -1.36
CLDND1-227ENST00000513452 ARL6IP6Q8N6S5 226 aa6.56□□□□□ -1.36
CLDND1-227ENST00000513452 RPL36ALQ969Q0 106 aaKnown RBP6.56□□□□□ -1.36
CLDND1-227ENST00000513452 CHCHD5Q9BSY4 110 aa6.56□□□□□ -1.36
CLDND1-227ENST00000513452 WDR61Q9GZS3 305 aaKnown RBP6.56□□□□□ -1.36
CLDND1-227ENST00000513452 C17orf112F2Z3M2 114 aa6.55□□□□□ -1.36
CLDND1-227ENST00000513452 H3BMQ9 156 aa6.55□□□□□ -1.36
CLDND1-227ENST00000513452 H3BVH4 76 aa6.55□□□□□ -1.36
CLDND1-227ENST00000513452 SLPIP03973 132 aa6.55□□□□□ -1.36
CLDND1-227ENST00000513452 TMBIM6P55061 237 aa6.55□□□□□ -1.36
CLDND1-227ENST00000513452 SMUG1Q53HV7 270 aa6.55□□□□□ -1.36
CLDND1-227ENST00000513452 TRIQKQ629K1 86 aa6.55□□□□□ -1.36
CLDND1-227ENST00000513452 SPINK6Q6UWN8 80 aa6.55□□□□□ -1.36
CLDND1-227ENST00000513452 LYPD6BQ8NI32 183 aa6.55□□□□□ -1.36
CLDND1-227ENST00000513452 AP5S1Q9NUS5 200 aa6.55□□□□□ -1.36
CLDND1-227ENST00000513452 PRR34Q9NV39 138 aa6.55□□□□□ -1.36
CLDND1-227ENST00000513452 IGLV10-54A0A075B6I4 117 aa6.54□□□□□ -1.36
CLDND1-227ENST00000513452 TRBV7-3A0A075B6L6 115 aa6.54□□□□□ -1.36
CLDND1-227ENST00000513452 IGKV3D-20A0A0C4DH25 116 aa6.54□□□□□ -1.36
CLDND1-227ENST00000513452 MUC21A0A0G2JKD1 596 aa6.54□□□□□ -1.36
CLDND1-227ENST00000513452 NOL3O60936 208 aaKnown RBP6.54□□□□□ -1.36
CLDND1-227ENST00000513452 TCRBP04435 133 aa6.54□□□□□ -1.36
CLDND1-227ENST00000513452 S100A5P33763 92 aa6.54□□□□□ -1.36
CLDND1-227ENST00000513452 MAJINQ3KP22 176 aa6.54□□□□□ -1.36
CLDND1-227ENST00000513452 LINC00269Q8N2A0 174 aa6.54□□□□□ -1.36
CLDND1-227ENST00000513452 OR11H4Q8NGC9 324 aa6.54□□□□□ -1.36
CLDND1-227ENST00000513452 SEC22CQ9BRL7 303 aa6.54□□□□□ -1.36
CLDND1-227ENST00000513452 IL36BQ9NZH7 164 aa6.54□□□□□ -1.36
CLDND1-227ENST00000513452 PSG8Q9UQ74 426 aa6.54□□□□□ -1.36
CLDND1-227ENST00000513452 IGKV2-24A0A0C4DH68 120 aa6.53□□□□□ -1.36
CLDND1-227ENST00000513452 TRBV10-1A0A0K0K1A3 114 aa6.53□□□□□ -1.36
CLDND1-227ENST00000513452 SERTM2A0A1B0GWG4 89 aa6.53□□□□□ -1.36
CLDND1-227ENST00000513452 PKIAP61925 76 aa6.53□□□□□ -1.36
CLDND1-227ENST00000513452 IL15RAQ13261 267 aa6.53□□□□□ -1.36
CLDND1-227ENST00000513452 PRNTQ86SH4 94 aa6.53□□□□□ -1.36
CLDND1-227ENST00000513452 CENPXA8MT69 81 aa6.52□□□□□ -1.37
CLDND1-227ENST00000513452 K7EQM0 130 aa6.52□□□□□ -1.37
CLDND1-227ENST00000513452 TCRAP04437 139 aa6.52□□□□□ -1.37
CLDND1-227ENST00000513452 RBX1P62877 108 aa6.52□□□□□ -1.37
CLDND1-227ENST00000513452 FLI1Q01543 452 aaPredicted RBP6.52□□□□□ -1.37
CLDND1-227ENST00000513452 COX6A2Q02221 97 aa6.52□□□□□ -1.37
CLDND1-227ENST00000513452 PQLC2Q6ZP29 291 aa6.52□□□□□ -1.37
CLDND1-227ENST00000513452 STPG4Q8N801 248 aa6.52□□□□□ -1.37
CLDND1-227ENST00000513452 C5orf17Q8NAS9 161 aa6.52□□□□□ -1.37
CLDND1-227ENST00000513452 MUC2Q02817 5179 aa6.52□□□□□ -1.37
CLDND1-227ENST00000513452 B4DEV8 164 aa6.51□□□□□ -1.37
CLDND1-227ENST00000513452 M0R381 172 aa6.51□□□□□ -1.37
CLDND1-227ENST00000513452 HMGB3O15347 200 aaKnown RBP6.51□□□□□ -1.37
CLDND1-227ENST00000513452 ARMS2P0C7Q2 107 aa6.51□□□□□ -1.37
CLDND1-227ENST00000513452 GAGE6Q13070 117 aa6.51□□□□□ -1.37
CLDND1-227ENST00000513452 SFRP2Q96HF1 295 aa6.51□□□□□ -1.37
CLDND1-227ENST00000513452 FAT4Q6V0I7 4981 aa6.51□□□□□ -1.37
CLDND1-227ENST00000513452 TRAV6A0A075B6T7 132 aa6.5□□□□□ -1.37
CLDND1-227ENST00000513452 H7C1H1 209 aa6.5□□□□□ -1.37
CLDND1-227ENST00000513452 M0R036 132 aa6.5□□□□□ -1.37
CLDND1-227ENST00000513452 NDUFS6O75380 124 aaKnown RBP6.5□□□□□ -1.37
CLDND1-227ENST00000513452 RAB5CP51148 216 aa6.5□□□□□ -1.37
CLDND1-227ENST00000513452 REG3AQ06141 175 aa6.5□□□□□ -1.37
CLDND1-227ENST00000513452 SRSF9Q13242 221 aaKnown RBP eCLIP6.5□□□□□ -1.37
CLDND1-227ENST00000513452 CNPY1Q3B7I2 92 aa6.5□□□□□ -1.37
CLDND1-227ENST00000513452 NEXN-AS1Q8NBZ9 246 aa6.5□□□□□ -1.37
CLDND1-227ENST00000513452 OR10G8Q8NGN5 311 aa6.5□□□□□ -1.37
CLDND1-227ENST00000513452 PRSS3P2Q8NHM4 247 aa6.5□□□□□ -1.37
CLDND1-227ENST00000513452 VAX2Q9UIW0 290 aa6.5□□□□□ -1.37
CLDND1-227ENST00000513452 PHLDA3Q9Y5J5 127 aa6.5□□□□□ -1.37
CLDND1-227ENST00000513452 A0A1W2PPV4 95 aa6.49□□□□□ -1.37
CLDND1-227ENST00000513452 GRIFINA4D1Z8 144 aa6.49□□□□□ -1.37
CLDND1-227ENST00000513452 ARL14EPLP0DKL9 152 aa6.49□□□□□ -1.37
CLDND1-227ENST00000513452 ZNF56Q15929 161 aa6.49□□□□□ -1.37
CLDND1-227ENST00000513452 SAPCD1Q5SSQ6 148 aa6.49□□□□□ -1.37
CLDND1-227ENST00000513452 NTM-AS1Q6ZSK4 140 aa6.49□□□□□ -1.37
CLDND1-227ENST00000513452 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.49□□□□□ -1.37
CLDND1-227ENST00000513452 FAM231BA6NCW3 169 aa6.48□□□□□ -1.37
CLDND1-227ENST00000513452 FABP5P3A8MUU1 101 aa6.48□□□□□ -1.37
CLDND1-227ENST00000513452 TPT1P13693 172 aaKnown RBP6.48□□□□□ -1.37
CLDND1-227ENST00000513452 RAB2AP61019 212 aa6.48□□□□□ -1.37
CLDND1-227ENST00000513452 LRRC37A5PQ49AS3 106 aa6.48□□□□□ -1.37
CLDND1-227ENST00000513452 SCGB1C1Q8TD33 95 aa6.48□□□□□ -1.37
CLDND1-227ENST00000513452 NUDT15Q9NV35 164 aa6.48□□□□□ -1.37
CLDND1-227ENST00000513452 A0A096LNI7 61 aa6.47□□□□□ -1.37
CLDND1-227ENST00000513452 TRAV34A0A0B4J273 112 aa6.47□□□□□ -1.37
CLDND1-227ENST00000513452 KRBOX1C9JBD0 128 aa6.47□□□□□ -1.37
CLDND1-227ENST00000513452 RPS10P46783 165 aaKnown RBP6.47□□□□□ -1.37
CLDND1-227ENST00000513452 DNLZQ5SXM8 178 aa6.47□□□□□ -1.37
CLDND1-227ENST00000513452 Q6ZRP5 223 aa6.47□□□□□ -1.37
CLDND1-227ENST00000513452 ZFP82Q8N141 532 aa6.47□□□□□ -1.37
CLDND1-227ENST00000513452 C15orf56Q8N910 161 aa6.47□□□□□ -1.37
CLDND1-227ENST00000513452 SDHCQ99643 169 aaPredicted RBP6.47□□□□□ -1.37
CLDND1-227ENST00000513452 EPDR1Q9UM22 224 aa6.47□□□□□ -1.37
CLDND1-227ENST00000513452 ARL2-SNX15V9GYD0 113 aa6.47□□□□□ -1.37
CLDND1-227ENST00000513452 TRBV25-1A0A075B6N4 114 aa6.46□□□□□ -1.38
CLDND1-227ENST00000513452 TMSB15BA0A087X1C1 80 aa6.46□□□□□ -1.38
CLDND1-227ENST00000513452 TRAV8-4A0A0B4J246 113 aa6.46□□□□□ -1.38
CLDND1-227ENST00000513452 TRAV26-2A0A0B4J265 109 aa6.46□□□□□ -1.38
CLDND1-227ENST00000513452 IFNA7P01567 189 aa6.46□□□□□ -1.38
CLDND1-227ENST00000513452 P01737 135 aa6.46□□□□□ -1.38
CLDND1-227ENST00000513452 IL7P13232 177 aa6.46□□□□□ -1.38
CLDND1-227ENST00000513452 RAB4BP61018 213 aa6.46□□□□□ -1.38
CLDND1-227ENST00000513452 SUMO1P63165 101 aaKnown RBP6.46□□□□□ -1.38
CLDND1-227ENST00000513452 HIGD2BQ4VC39 106 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms