RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 REG4Q9BYZ8 158 aa0.74□□□□□ -2.29
RNF4-219ENST00000513450 CYSTM1Q9H1C7 97 aa0.74□□□□□ -2.29
RNF4-219ENST00000513450 LINC00312Q9Y6C7 94 aa0.74□□□□□ -2.29
RNF4-219ENST00000513450 KIAA0100Q14667 2235 aaKnown RBP0.74□□□□□ -2.29
RNF4-219ENST00000513450 SPHKAPQ2M3C7 1700 aa0.74□□□□□ -2.29
RNF4-219ENST00000513450 ANKRD26Q9UPS8 1709 aa0.74□□□□□ -2.29
RNF4-219ENST00000513450 INTS1Q8N201 2190 aaKnown RBP0.74□□□□□ -2.29
RNF4-219ENST00000513450 COL4A1P02462 1669 aa0.74□□□□□ -2.29
RNF4-219ENST00000513450 TTC37Q6PGP7 1564 aa0.74□□□□□ -2.29
RNF4-219ENST00000513450 MYH8P13535 1937 aa0.74□□□□□ -2.29
RNF4-219ENST00000513450 SDK1Q7Z5N4 2213 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 LAMB1P07942 1786 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 KTN1Q86UP2 1357 aaKnown RBP0.73□□□□□ -2.29
RNF4-219ENST00000513450 DOCK11Q5JSL3 2073 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 TMEM262E9PQX1 116 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 F8W1H4 67 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 COX7CP15954 63 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 SNCAP37840 140 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 RHOHQ15669 191 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 SPANXN1Q5VSR9 72 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 SLC48A1Q6P1K1 146 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 C2orf82Q6UX34 121 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 SPTSSBQ8NFR3 76 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 OR10AG1Q8NH19 301 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 COPS9Q8WXC6 57 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 TSLPQ969D9 159 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 IFI27L1Q96BM0 104 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 PRO1933Q9H354 126 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 CDC42SE1Q9NRR8 79 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 ORMDL1Q9P0S3 153 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 PATJQ8NI35 1801 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 TNRC6BQ9UPQ9 1833 aaKnown RBP0.73□□□□□ -2.29
RNF4-219ENST00000513450 MAGI1Q96QZ7 1491 aaPredicted RBP0.73□□□□□ -2.29
RNF4-219ENST00000513450 SPTBP11277 2137 aa0.73□□□□□ -2.29
RNF4-219ENST00000513450 ABCC5O15440 1437 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 ARAP2Q8WZ64 1704 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 SORL1Q92673 2214 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 MED12Q93074 2177 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 MUC6Q6W4X9 2439 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 A0A0J9YY99 117 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 TRBV6-5A0A0K0K1A5 114 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 TRBV6-4A0A1B0GX49 114 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 TCRBV3S1A0A5B6 114 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 TMEM30CPA0ZSE6 113 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 CLPSL1A2RUU4 121 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 NUPR2A6NF83 97 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 HCG22E2RYF7 251 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 ANGP03950 147 aaKnown RBP0.72□□□□□ -2.29
RNF4-219ENST00000513450 CCKP06307 115 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 PIPP12273 146 aaPredicted RBP0.72□□□□□ -2.29
RNF4-219ENST00000513450 CBLN1P23435 193 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 POLR2JP52435 117 aaKnown RBP0.72□□□□□ -2.29
RNF4-219ENST00000513450 UBA52P62987 128 aaKnown RBP0.72□□□□□ -2.29
RNF4-219ENST00000513450 C5orf38Q86SI9 138 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 SPANXDQ9BXN6 97 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 MRPL36Q9P0J6 103 aaKnown RBP0.72□□□□□ -2.29
RNF4-219ENST00000513450 FCGBPQ9Y6R7 5405 aaPredicted RBP0.72□□□□□ -2.29
RNF4-219ENST00000513450 MAPKBP1O60336 1514 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 ADGRL2O95490 1459 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 PRDM2Q13029 1718 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 KIAA1551Q9HCM1 1747 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 CPSF1Q10570 1443 aaKnown RBP0.72□□□□□ -2.29
RNF4-219ENST00000513450 C10orf71Q711Q0 1435 aa0.72□□□□□ -2.29
RNF4-219ENST00000513450 SHROOM2Q13796 1616 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 PHRF1Q9P1Y6 1649 aaKnown RBP0.71□□□□□ -2.3
RNF4-219ENST00000513450 WNK3Q9BYP7 1800 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 TRAV2A0A0B4J234 112 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 TRAV12-3A0A0B4J271 114 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 TEX49A0A1B0GTD5 131 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 LOC101927531A0A1B0GV80 90 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 hADV29S1A0JD25 119 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 FAM24AA6NFZ4 105 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 NUPR1O60356 82 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 PPYP01298 95 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 IGLC1P0CG04 106 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 IL9P15248 144 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 PYY3Q5JQD4 70 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 UNQ5815/PRO19632Q6UWF5 114 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 FAM213BQ8TBF2 198 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 PPDPFLQ8WWR9 84 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 AQP10Q96PS8 301 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 DPY30Q9C005 99 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 WFDC10AQ9H1F0 79 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 NPVFQ9HCQ7 196 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 FAIMQ9NVQ4 179 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 MRPL35Q9NZE8 188 aaKnown RBP0.71□□□□□ -2.3
RNF4-219ENST00000513450 C22orf24Q9Y442 160 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 ABCA3Q99758 1704 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 ARFGEF1Q9Y6D6 1849 aa0.71□□□□□ -2.3
RNF4-219ENST00000513450 PRRC2BQ5JSZ5 2229 aaKnown RBP0.7□□□□□ -2.3
RNF4-219ENST00000513450 ARHGAP5Q13017 1502 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 NCOA6Q14686 2063 aaPredicted RBP0.7□□□□□ -2.3
RNF4-219ENST00000513450 MED14O60244 1454 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 TEX14Q8IWB6 1497 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 IFT140Q96RY7 1462 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 TRBV10-1A0A0K0K1A3 114 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 NBDYA0A0U1RRE5 68 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 UBE2L5PA0A1B0GUS4 154 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 C10orf142B7Z368 130 aa0.7□□□□□ -2.3
RNF4-219ENST00000513450 H3BRM9 83 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms