RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, human

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFC1-215	ENST00000512881	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.62	□□□□□ -1.67
RFC1-215	ENST00000512881	PTH2	Q96A98	100 aa		4.62	□□□□□ -1.67
RFC1-215	ENST00000512881	LINC00479	Q96M42	142 aa		4.62	□□□□□ -1.67
RFC1-215	ENST00000512881	SH3BGRL3	Q9H299	93 aa		4.62	□□□□□ -1.67
RFC1-215	ENST00000512881	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.61	□□□□□ -1.67
RFC1-215	ENST00000512881	TRAV8-6	A0A0B4J262	113 aa		4.61	□□□□□ -1.67
RFC1-215	ENST00000512881	TRAV34	A0A0B4J273	112 aa		4.61	□□□□□ -1.67
RFC1-215	ENST00000512881	IGHV3-38	A0A0C4DH36	116 aa		4.61	□□□□□ -1.67
RFC1-215	ENST00000512881	TRBV6-4	A0A1B0GX49	114 aa		4.61	□□□□□ -1.67
RFC1-215	ENST00000512881		A0A1W2PRE2	83 aa		4.61	□□□□□ -1.67
RFC1-215	ENST00000512881	PGPEP1L	A6NFU8	196 aa		4.61	□□□□□ -1.67
RFC1-215	ENST00000512881	GIP	P09681	153 aa	Predicted RBP	4.61	□□□□□ -1.67
RFC1-215	ENST00000512881	PPT1	P50897	306 aa		4.61	□□□□□ -1.67
RFC1-215	ENST00000512881	KRTAP10-1	P60331	282 aa		4.61	□□□□□ -1.67
RFC1-215	ENST00000512881	RPL7L1	Q6DKI1	246 aa	Known RBP	4.61	□□□□□ -1.67
RFC1-215	ENST00000512881	C10orf126	Q8N4M7	172 aa		4.61	□□□□□ -1.67
RFC1-215	ENST00000512881	TMEM75	Q8N9X5	138 aa		4.61	□□□□□ -1.67
RFC1-215	ENST00000512881	C9orf85	Q96MD7	179 aa		4.61	□□□□□ -1.67
RFC1-215	ENST00000512881	PRADC1	Q9BSG0	188 aa		4.61	□□□□□ -1.67
RFC1-215	ENST00000512881	MYCBP2	O75592	4640 aa		4.61	□□□□□ -1.67
RFC1-215	ENST00000512881	FXYD6-FXYD2	A0A087WZ82	144 aa		4.6	□□□□□ -1.67
RFC1-215	ENST00000512881	IGKV3D-20	A0A0C4DH25	116 aa		4.6	□□□□□ -1.67
RFC1-215	ENST00000512881	RNF222	A6NCQ9	220 aa		4.6	□□□□□ -1.67
RFC1-215	ENST00000512881	FABP5P3	A8MUU1	101 aa		4.6	□□□□□ -1.67
RFC1-215	ENST00000512881	IBA57-AS1	B1ANH7	110 aa		4.6	□□□□□ -1.67
RFC1-215	ENST00000512881	IFNA7	P01567	189 aa		4.6	□□□□□ -1.67
RFC1-215	ENST00000512881	RNASE3	P12724	160 aa	Known RBP	4.6	□□□□□ -1.67
RFC1-215	ENST00000512881	XG	P55808	180 aa		4.6	□□□□□ -1.67
RFC1-215	ENST00000512881	UBE2G2	P60604	165 aa		4.6	□□□□□ -1.67
RFC1-215	ENST00000512881	RHOH	Q15669	191 aa		4.6	□□□□□ -1.67
RFC1-215	ENST00000512881	ZNF726P1	Q15940	193 aa		4.6	□□□□□ -1.67
RFC1-215	ENST00000512881	ZFP69	Q49AA0	526 aa		4.6	□□□□□ -1.67
RFC1-215	ENST00000512881	LINC01556	Q5JQF7	62 aa		4.6	□□□□□ -1.67
RFC1-215	ENST00000512881	OR10J3	Q5JRS4	329 aa		4.6	□□□□□ -1.67
RFC1-215	ENST00000512881	ZNF506	Q5JVG8	444 aa		4.6	□□□□□ -1.67
RFC1-215	ENST00000512881	CTXND1	A0A1B0GTU2	59 aa		4.59	□□□□□ -1.67
RFC1-215	ENST00000512881	EPM2A	B3EWF7	344 aa		4.59	□□□□□ -1.67
RFC1-215	ENST00000512881	PEX7	O00628	323 aa		4.59	□□□□□ -1.67
RFC1-215	ENST00000512881	PSCA	O43653	123 aa		4.59	□□□□□ -1.67
RFC1-215	ENST00000512881	MGST1	P10620	155 aa	Known RBP	4.59	□□□□□ -1.67
RFC1-215	ENST00000512881	S100A4	P26447	101 aa	Known RBP	4.59	□□□□□ -1.67
RFC1-215	ENST00000512881	FGF8	P55075	233 aa	Predicted RBP	4.59	□□□□□ -1.67
RFC1-215	ENST00000512881	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.59	□□□□□ -1.67
RFC1-215	ENST00000512881	LELP1	Q5T871	98 aa		4.59	□□□□□ -1.67
RFC1-215	ENST00000512881	ZFP2	Q6ZN57	461 aa		4.59	□□□□□ -1.67
RFC1-215	ENST00000512881	OR2T35	Q8NGX2	323 aa		4.59	□□□□□ -1.67
RFC1-215	ENST00000512881	ATP6V0E2	Q8NHE4	81 aa		4.59	□□□□□ -1.67
RFC1-215	ENST00000512881	NKX6-2	Q9C056	277 aa	Predicted RBP	4.59	□□□□□ -1.67
RFC1-215	ENST00000512881	GTSF1L	Q9H1H1	148 aa		4.59	□□□□□ -1.67
RFC1-215	ENST00000512881	ARL2-SNX15	V9GYD0	113 aa		4.59	□□□□□ -1.67
RFC1-215	ENST00000512881	LRCOL1	A6NCL2	159 aa		4.58	□□□□□ -1.68
RFC1-215	ENST00000512881	FAM74A7	A6NL05	159 aa		4.58	□□□□□ -1.68
RFC1-215	ENST00000512881		A8MWV9	139 aa		4.58	□□□□□ -1.68
RFC1-215	ENST00000512881		B4DEV8	164 aa		4.58	□□□□□ -1.68
RFC1-215	ENST00000512881	RHOD	O00212	210 aa		4.58	□□□□□ -1.68
RFC1-215	ENST00000512881	IGHV3-30	P01768	117 aa		4.58	□□□□□ -1.68
RFC1-215	ENST00000512881	IGHV3-33	P01772	117 aa		4.58	□□□□□ -1.68
RFC1-215	ENST00000512881	IGHV3-30-3	P0DP02	117 aa		4.58	□□□□□ -1.68
RFC1-215	ENST00000512881	IGHV3-30-5	P0DP03	117 aa		4.58	□□□□□ -1.68
RFC1-215	ENST00000512881	ASIP	P42127	132 aa		4.58	□□□□□ -1.68
RFC1-215	ENST00000512881	CRIP1	P50238	77 aa		4.58	□□□□□ -1.68
RFC1-215	ENST00000512881	AKR1C8P	Q5T2L2	129 aa		4.58	□□□□□ -1.68
RFC1-215	ENST00000512881	HIST1H2BA	Q96A08	127 aa		4.58	□□□□□ -1.68
RFC1-215	ENST00000512881	PARL	Q9H300	379 aa		4.58	□□□□□ -1.68
RFC1-215	ENST00000512881	JPT2	Q9H910	190 aa		4.58	□□□□□ -1.68
RFC1-215	ENST00000512881		Q9HAA7	133 aa		4.58	□□□□□ -1.68
RFC1-215	ENST00000512881	CYTL1	Q9NRR1	136 aa		4.58	□□□□□ -1.68
RFC1-215	ENST00000512881	IGLV5-52	A0A0A0MRZ9	124 aa		4.57	□□□□□ -1.68
RFC1-215	ENST00000512881	GAGE12J	A6NER3	117 aa		4.57	□□□□□ -1.68
RFC1-215	ENST00000512881	KRBOX1	C9JBD0	128 aa		4.57	□□□□□ -1.68
RFC1-215	ENST00000512881		G3V3Q6	166 aa		4.57	□□□□□ -1.68
RFC1-215	ENST00000512881	ARMS2	P0C7Q2	107 aa		4.57	□□□□□ -1.68
RFC1-215	ENST00000512881	GAGE1	Q13065	139 aa		4.57	□□□□□ -1.68
RFC1-215	ENST00000512881	GAGE4	Q13068	117 aa		4.57	□□□□□ -1.68
RFC1-215	ENST00000512881	GAGE5	Q13069	117 aa		4.57	□□□□□ -1.68
RFC1-215	ENST00000512881	UFSP1	Q6NVU6	142 aa		4.57	□□□□□ -1.68
RFC1-215	ENST00000512881	COX8C	Q7Z4L0	72 aa		4.57	□□□□□ -1.68
RFC1-215	ENST00000512881		Q86TA4	180 aa		4.57	□□□□□ -1.68
RFC1-215	ENST00000512881	C14orf178	Q8N769	122 aa	Predicted RBP	4.57	□□□□□ -1.68
RFC1-215	ENST00000512881	ZC2HC1A	Q96GY0	325 aa		4.57	□□□□□ -1.68
RFC1-215	ENST00000512881	SAMD10	Q9BYL1	202 aa		4.57	□□□□□ -1.68
RFC1-215	ENST00000512881	IL36B	Q9NZH7	164 aa		4.57	□□□□□ -1.68
RFC1-215	ENST00000512881		Q9UF83	564 aa		4.57	□□□□□ -1.68
RFC1-215	ENST00000512881	ZFP30	Q9Y2G7	519 aa		4.57	□□□□□ -1.68
RFC1-215	ENST00000512881	GRIFIN	A4D1Z8	144 aa		4.56	□□□□□ -1.68
RFC1-215	ENST00000512881	MAP1LC3B2	A6NCE7	125 aa		4.56	□□□□□ -1.68
RFC1-215	ENST00000512881		H3BVH4	76 aa		4.56	□□□□□ -1.68
RFC1-215	ENST00000512881		M0R036	132 aa		4.56	□□□□□ -1.68
RFC1-215	ENST00000512881	ARPC5	O15511	151 aa		4.56	□□□□□ -1.68
RFC1-215	ENST00000512881	SH2D1A	O60880	128 aa		4.56	□□□□□ -1.68
RFC1-215	ENST00000512881	SMR3B	P02814	79 aa	Predicted RBP	4.56	□□□□□ -1.68
RFC1-215	ENST00000512881	INAFM2	P0DMQ5	153 aa		4.56	□□□□□ -1.68
RFC1-215	ENST00000512881	LINC00694	P0DN24	101 aa		4.56	□□□□□ -1.68
RFC1-215	ENST00000512881	FHIT	P49789	147 aa		4.56	□□□□□ -1.68
RFC1-215	ENST00000512881	DNLZ	Q5SXM8	178 aa		4.56	□□□□□ -1.68
RFC1-215	ENST00000512881	FAM162B	Q5T6X4	162 aa		4.56	□□□□□ -1.68
RFC1-215	ENST00000512881	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.56	□□□□□ -1.68
RFC1-215	ENST00000512881		Q8N814	137 aa		4.56	□□□□□ -1.68
RFC1-215	ENST00000512881	OR11H4	Q8NGC9	324 aa		4.56	□□□□□ -1.68
RFC1-215	ENST00000512881	FMC1	Q96HJ9	113 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms