RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 HIST1H1DP16402 221 aaKnown RBP2.2□□□□□ -2.06
RFC1-214ENST00000512726 C10orf99Q6UWK7 81 aa2.2□□□□□ -2.06
RFC1-214ENST00000512726 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.2□□□□□ -2.06
RFC1-214ENST00000512726 PPP1R1CQ8WVI7 109 aa2.2□□□□□ -2.06
RFC1-214ENST00000512726 SEC11CQ9BY50 192 aa2.2□□□□□ -2.06
RFC1-214ENST00000512726 KMT2BQ9UMN6 2715 aaPredicted RBP2.2□□□□□ -2.06
RFC1-214ENST00000512726 PEG3Q9GZU2 1588 aa2.19□□□□□ -2.06
RFC1-214ENST00000512726 DAPK1P53355 1430 aa2.19□□□□□ -2.06
RFC1-214ENST00000512726 NCOA3Q9Y6Q9 1424 aa2.19□□□□□ -2.06
RFC1-214ENST00000512726 LAMB1P07942 1786 aa2.19□□□□□ -2.06
RFC1-214ENST00000512726 ZNF56Q15929 161 aa2.19□□□□□ -2.06
RFC1-214ENST00000512726 C9orf116Q5BN46 136 aaPredicted RBP2.19□□□□□ -2.06
RFC1-214ENST00000512726 RPRMQ9NS64 109 aa2.19□□□□□ -2.06
RFC1-214ENST00000512726 TRAV12-3A0A0B4J271 114 aa2.18□□□□□ -2.06
RFC1-214ENST00000512726 FGF7P21781 194 aa2.18□□□□□ -2.06
RFC1-214ENST00000512726 AGPAT4-IT1Q9H0P7 198 aa2.18□□□□□ -2.06
RFC1-214ENST00000512726 RERGLQ9H628 205 aa2.18□□□□□ -2.06
RFC1-214ENST00000512726 WDR7Q9Y4E6 1490 aa2.18□□□□□ -2.06
RFC1-214ENST00000512726 ESPL1Q14674 2120 aa2.18□□□□□ -2.06
RFC1-214ENST00000512726 NALCNQ8IZF0 1738 aa2.17□□□□□ -2.06
RFC1-214ENST00000512726 KLKP1Q107X0 134 aa2.17□□□□□ -2.06
RFC1-214ENST00000512726 COA4Q9NYJ1 87 aa2.17□□□□□ -2.06
RFC1-214ENST00000512726 MUC22E2RYF6 1773 aaPredicted RBP2.16□□□□□ -2.06
RFC1-214ENST00000512726 CFTRP13569 1480 aa2.16□□□□□ -2.06
RFC1-214ENST00000512726 MBD5Q9P267 1494 aa2.16□□□□□ -2.06
RFC1-214ENST00000512726 UBE2G1P62253 170 aa2.16□□□□□ -2.06
RFC1-214ENST00000512726 BTG2P78543 158 aa2.16□□□□□ -2.06
RFC1-214ENST00000512726 NAA60Q9H7X0 242 aa2.15□□□□□ -2.07
RFC1-214ENST00000512726 BET1LQ9NYM9 111 aa2.15□□□□□ -2.07
RFC1-214ENST00000512726 KNTC1P50748 2209 aa2.15□□□□□ -2.07
RFC1-214ENST00000512726 BCL9LQ86UU0 1499 aa2.14□□□□□ -2.07
RFC1-214ENST00000512726 IFNA17P01571 189 aa2.14□□□□□ -2.07
RFC1-214ENST00000512726 CBLN1P23435 193 aa2.14□□□□□ -2.07
RFC1-214ENST00000512726 NPC2P61916 151 aa2.14□□□□□ -2.07
RFC1-214ENST00000512726 PLAC4Q8WY50 150 aa2.14□□□□□ -2.07
RFC1-214ENST00000512726 C2orf88Q9BSF0 95 aa2.14□□□□□ -2.07
RFC1-214ENST00000512726 SERP1Q9Y6X1 66 aa2.14□□□□□ -2.07
RFC1-214ENST00000512726 BCORL1Q5H9F3 1711 aa2.14□□□□□ -2.07
RFC1-214ENST00000512726 ZNF518AQ6AHZ1 1483 aa2.14□□□□□ -2.07
RFC1-214ENST00000512726 TMEM14BQ9NUH8 114 aa2.13□□□□□ -2.07
RFC1-214ENST00000512726 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
RFC1-214ENST00000512726 SMG6Q86US8 1419 aaKnown RBP2.12□□□□□ -2.07
RFC1-214ENST00000512726 LINC00587B1AMM8 73 aa2.12□□□□□ -2.07
RFC1-214ENST00000512726 AKAIN1P0CW23 69 aa2.12□□□□□ -2.07
RFC1-214ENST00000512726 SPINK13Q1W4C9 94 aa2.12□□□□□ -2.07
RFC1-214ENST00000512726 S100A7L2Q5SY68 101 aa2.12□□□□□ -2.07
RFC1-214ENST00000512726 LOC100130705A0A1B0GUX0 176 aa2.11□□□□□ -2.07
RFC1-214ENST00000512726 K7EIL1 84 aa2.11□□□□□ -2.07
RFC1-214ENST00000512726 PLXNA1Q9UIW2 1896 aa2.11□□□□□ -2.07
RFC1-214ENST00000512726 PIGBOS1A0A0B4J2F0 54 aa2.1□□□□□ -2.07
RFC1-214ENST00000512726 FXYD6P3P58550 94 aa2.1□□□□□ -2.07
RFC1-214ENST00000512726 TMEM203Q969S6 136 aa2.1□□□□□ -2.07
RFC1-214ENST00000512726 C12orf73Q69YU5 71 aa2.09□□□□□ -2.07
RFC1-214ENST00000512726 Q6AWC8 147 aa2.09□□□□□ -2.07
RFC1-214ENST00000512726 C10orf82Q8WW14 230 aa2.09□□□□□ -2.07
RFC1-214ENST00000512726 PP6455Q8WZ26 134 aa2.09□□□□□ -2.07
RFC1-214ENST00000512726 PARP14Q460N5 1801 aa2.08□□□□□ -2.08
RFC1-214ENST00000512726 EIF4G3O43432 1585 aaKnown RBP2.08□□□□□ -2.08
RFC1-214ENST00000512726 MCRIP1C9JLW8 97 aa2.08□□□□□ -2.08
RFC1-214ENST00000512726 CCL3L1P16619 93 aa2.08□□□□□ -2.08
RFC1-214ENST00000512726 SSBP1Q04837 148 aaKnown RBP2.08□□□□□ -2.08
RFC1-214ENST00000512726 SPTSSBQ8NFR3 76 aa2.08□□□□□ -2.08
RFC1-214ENST00000512726 RBAKDNA6NC62 111 aa2.07□□□□□ -2.08
RFC1-214ENST00000512726 SPINT3P49223 89 aa2.07□□□□□ -2.08
RFC1-214ENST00000512726 ELOF1P60002 83 aaKnown RBP2.07□□□□□ -2.08
RFC1-214ENST00000512726 Q56UQ5 140 aa2.07□□□□□ -2.08
RFC1-214ENST00000512726 C20orf197Q8N268 126 aa2.07□□□□□ -2.08
RFC1-214ENST00000512726 LSM10Q969L4 123 aaKnown RBP2.07□□□□□ -2.08
RFC1-214ENST00000512726 SCN3BQ9NY72 215 aa2.07□□□□□ -2.08
RFC1-214ENST00000512726 NRXN2Q9P2S2 1712 aa2.07□□□□□ -2.08
RFC1-214ENST00000512726 ABCA1O95477 2261 aa2.07□□□□□ -2.08
RFC1-214ENST00000512726 PHIPQ8WWQ0 1821 aa2.06□□□□□ -2.08
RFC1-214ENST00000512726 FAM74A4Q5TZK3 123 aa2.06□□□□□ -2.08
RFC1-214ENST00000512726 DSCR8Q96T75 97 aa2.06□□□□□ -2.08
RFC1-214ENST00000512726 MED13LQ71F56 2210 aa2.06□□□□□ -2.08
RFC1-214ENST00000512726 TRBV10-3A0A0K0K1G6 114 aa2.05□□□□□ -2.08
RFC1-214ENST00000512726 IFNGP01579 166 aa2.05□□□□□ -2.08
RFC1-214ENST00000512726 SPAARA0A1B0GVQ0 90 aa2.04□□□□□ -2.08
RFC1-214ENST00000512726 LY6G6CO95867 125 aa2.04□□□□□ -2.08
RFC1-214ENST00000512726 C4orf33Q8N1A6 199 aa2.04□□□□□ -2.08
RFC1-214ENST00000512726 COX7B2Q8TF08 81 aa2.04□□□□□ -2.08
RFC1-214ENST00000512726 GNG8Q9UK08 70 aa2.04□□□□□ -2.08
RFC1-214ENST00000512726 KDM6BO15054 1643 aa2.03□□□□□ -2.08
RFC1-214ENST00000512726 IFT140Q96RY7 1462 aa2.03□□□□□ -2.08
RFC1-214ENST00000512726 MIF4GDA9UHW6 222 aaKnown RBP2.03□□□□□ -2.08
RFC1-214ENST00000512726 APOC4-APOC2K7ER74 178 aa2.03□□□□□ -2.08
RFC1-214ENST00000512726 APOC2P02655 101 aa2.03□□□□□ -2.08
RFC1-214ENST00000512726 SPINK9Q5DT21 86 aa2.03□□□□□ -2.08
RFC1-214ENST00000512726 F6UZH7 168 aa2.02□□□□□ -2.09
RFC1-214ENST00000512726 UBE2D1P51668 147 aa2.02□□□□□ -2.09
RFC1-214ENST00000512726 ZNF818PQ6ZRF7 136 aa2.02□□□□□ -2.09
RFC1-214ENST00000512726 NWD2Q9ULI1 1742 aa2.01□□□□□ -2.09
RFC1-214ENST00000512726 SNAPC5O75971 98 aa2.01□□□□□ -2.09
RFC1-214ENST00000512726 RPL37P61927 97 aaKnown RBP2.01□□□□□ -2.09
RFC1-214ENST00000512726 CCL8P80075 99 aa2.01□□□□□ -2.09
RFC1-214ENST00000512726 A2ML1A8K2U0 1454 aa2.01□□□□□ -2.09
RFC1-214ENST00000512726 MAP2P11137 1827 aaKnown RBP2.01□□□□□ -2.09
RFC1-214ENST00000512726 RBBP6Q7Z6E9 1792 aaKnown RBP2□□□□□ -2.09
RFC1-214ENST00000512726 RBM3P98179 157 aaKnown RBP2□□□□□ -2.09
RFC1-214ENST00000512726 WHAMMP3Q1A5X7 153 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms