RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 VPS13CQ709C8 3753 aa6.86□□□□□ -1.31
CPNE4-210ENST00000512332 K7ERU9 68 aa6.85□□□□□ -1.31
CPNE4-210ENST00000512332 CRYGDP07320 174 aa6.85□□□□□ -1.31
CPNE4-210ENST00000512332 HOXD3P31249 432 aaPredicted RBP6.85□□□□□ -1.31
CPNE4-210ENST00000512332 AMTNQ6UX39 209 aa6.85□□□□□ -1.31
CPNE4-210ENST00000512332 Q8N1Y9 231 aa6.85□□□□□ -1.31
CPNE4-210ENST00000512332 Q8N2B8 174 aa6.85□□□□□ -1.31
CPNE4-210ENST00000512332 SPCS1Q9Y6A9 102 aa6.85□□□□□ -1.31
CPNE4-210ENST00000512332 TRBV7-3A0A075B6L6 115 aa6.85□□□□□ -1.31
CPNE4-210ENST00000512332 TRAV2A0A0B4J234 112 aa6.85□□□□□ -1.31
CPNE4-210ENST00000512332 A0A1B0GWB2 263 aa6.85□□□□□ -1.31
CPNE4-210ENST00000512332 SDHAF1A6NFY7 115 aa6.85□□□□□ -1.31
CPNE4-210ENST00000512332 M0QY20 66 aa6.85□□□□□ -1.31
CPNE4-210ENST00000512332 TSHBP01222 138 aa6.85□□□□□ -1.31
CPNE4-210ENST00000512332 IGHV4-31P0DP07 118 aa6.85□□□□□ -1.31
CPNE4-210ENST00000512332 PMVKQ15126 192 aa6.85□□□□□ -1.31
CPNE4-210ENST00000512332 MDFICQ9P1T7 246 aa6.85□□□□□ -1.31
CPNE4-210ENST00000512332 ZNF256Q9Y2P7 627 aaPredicted RBP6.85□□□□□ -1.31
CPNE4-210ENST00000512332 A0A087WWL8 130 aa6.84□□□□□ -1.31
CPNE4-210ENST00000512332 A8MTW9 85 aa6.84□□□□□ -1.31
CPNE4-210ENST00000512332 F5H697 171 aa6.84□□□□□ -1.31
CPNE4-210ENST00000512332 LRRC75A-AS1Q8N1F1 130 aa6.84□□□□□ -1.31
CPNE4-210ENST00000512332 WFDC12Q8WWY7 111 aa6.84□□□□□ -1.31
CPNE4-210ENST00000512332 BEX4Q9NWD9 120 aaPredicted RBP6.84□□□□□ -1.31
CPNE4-210ENST00000512332 NHP2Q9NX24 153 aaKnown RBP6.84□□□□□ -1.31
CPNE4-210ENST00000512332 TP53TG1Q9Y2A0 90 aa6.84□□□□□ -1.31
CPNE4-210ENST00000512332 TRGV11A0A075B6L2 103 aa6.84□□□□□ -1.32
CPNE4-210ENST00000512332 TRAV12-2A0A075B6T6 113 aa6.84□□□□□ -1.32
CPNE4-210ENST00000512332 RHOHQ15669 191 aa6.84□□□□□ -1.32
CPNE4-210ENST00000512332 TRPT1Q86TN4 253 aaKnown RBP6.84□□□□□ -1.32
CPNE4-210ENST00000512332 HIST1H4GQ99525 98 aa6.84□□□□□ -1.32
CPNE4-210ENST00000512332 PRADC1Q9BSG0 188 aa6.84□□□□□ -1.32
CPNE4-210ENST00000512332 EDA2RQ9HAV5 297 aa6.84□□□□□ -1.32
CPNE4-210ENST00000512332 USP9YO00507 2555 aaPredicted RBP6.83□□□□□ -1.32
CPNE4-210ENST00000512332 ACACBO00763 2458 aa6.83□□□□□ -1.32
CPNE4-210ENST00000512332 IGLV4-69A0A075B6H9 119 aa6.83□□□□□ -1.32
CPNE4-210ENST00000512332 SPINK13Q1W4C9 94 aa6.83□□□□□ -1.32
CPNE4-210ENST00000512332 C12orf74Q32Q52 190 aa6.83□□□□□ -1.32
CPNE4-210ENST00000512332 NSUN5P1Q3KNT7 163 aa6.83□□□□□ -1.32
CPNE4-210ENST00000512332 NEGR1Q7Z3B1 354 aa6.83□□□□□ -1.32
CPNE4-210ENST00000512332 NAA38Q9BRA0 125 aaKnown RBP6.83□□□□□ -1.32
CPNE4-210ENST00000512332 HOXA3O43365 443 aaPredicted RBP6.82□□□□□ -1.32
CPNE4-210ENST00000512332 ZNF876PQ49A33 203 aa6.82□□□□□ -1.32
CPNE4-210ENST00000512332 TCTEX1D4Q5JR98 221 aa6.82□□□□□ -1.32
CPNE4-210ENST00000512332 PIK3CD-AS1Q5SR53 167 aa6.82□□□□□ -1.32
CPNE4-210ENST00000512332 CELSR2Q9HCU4 2923 aa6.82□□□□□ -1.32
CPNE4-210ENST00000512332 IGLL5B9A064 214 aa6.82□□□□□ -1.32
CPNE4-210ENST00000512332 IGKV3-20P01619 116 aa6.82□□□□□ -1.32
CPNE4-210ENST00000512332 HERVK_113P61574 105 aa6.82□□□□□ -1.32
CPNE4-210ENST00000512332 MORN3Q6PF18 240 aaPredicted RBP6.82□□□□□ -1.32
CPNE4-210ENST00000512332 MAPK1IP1LQ8NDC0 245 aa6.82□□□□□ -1.32
CPNE4-210ENST00000512332 MYO18BQ8IUG5 2567 aa6.82□□□□□ -1.32
CPNE4-210ENST00000512332 PRRC2AP48634 2157 aaKnown RBP6.82□□□□□ -1.32
CPNE4-210ENST00000512332 C11orf86A6NJI1 115 aa6.81□□□□□ -1.32
CPNE4-210ENST00000512332 K7ERJ3 54 aa6.81□□□□□ -1.32
CPNE4-210ENST00000512332 Q5PR19 223 aa6.81□□□□□ -1.32
CPNE4-210ENST00000512332 FAM74A4Q5TZK3 123 aa6.81□□□□□ -1.32
CPNE4-210ENST00000512332 AGRNO00468 2067 aa6.81□□□□□ -1.32
CPNE4-210ENST00000512332 ANKRD17O75179 2603 aaKnown RBP6.81□□□□□ -1.32
CPNE4-210ENST00000512332 ZNF815PA8K554 130 aa6.81□□□□□ -1.32
CPNE4-210ENST00000512332 PCP4P48539 62 aa6.81□□□□□ -1.32
CPNE4-210ENST00000512332 RPL39P62891 51 aaKnown RBP6.81□□□□□ -1.32
CPNE4-210ENST00000512332 ZNF56Q15929 161 aa6.81□□□□□ -1.32
CPNE4-210ENST00000512332 DEFB113Q30KQ7 82 aa6.81□□□□□ -1.32
CPNE4-210ENST00000512332 PTH2Q96A98 100 aa6.81□□□□□ -1.32
CPNE4-210ENST00000512332 SPAG8Q99932 426 aaPredicted RBP6.81□□□□□ -1.32
CPNE4-210ENST00000512332 I3L3M4 83 aa6.8□□□□□ -1.32
CPNE4-210ENST00000512332 NFE4Q86UQ8 179 aa6.8□□□□□ -1.32
CPNE4-210ENST00000512332 ZNF479Q96JC4 524 aa6.8□□□□□ -1.32
CPNE4-210ENST00000512332 DUX5Q96PT3 197 aa6.8□□□□□ -1.32
CPNE4-210ENST00000512332 PEMTQ9UBM1 199 aa6.8□□□□□ -1.32
CPNE4-210ENST00000512332 MAP1AP78559 2803 aaPredicted RBP6.8□□□□□ -1.32
CPNE4-210ENST00000512332 TMEM238LA0A1B0GVL6 79 aa6.8□□□□□ -1.32
CPNE4-210ENST00000512332 A6NJY4 79 aa6.8□□□□□ -1.32
CPNE4-210ENST00000512332 H3BMM0 161 aa6.8□□□□□ -1.32
CPNE4-210ENST00000512332 P0DMU3 169 aa6.8□□□□□ -1.32
CPNE4-210ENST00000512332 FAM231AP0DMU4 169 aa6.8□□□□□ -1.32
CPNE4-210ENST00000512332 FAM231CP0DMU5 169 aa6.8□□□□□ -1.32
CPNE4-210ENST00000512332 SCGB2A2Q13296 93 aa6.8□□□□□ -1.32
CPNE4-210ENST00000512332 RNF151Q2KHN1 245 aa6.8□□□□□ -1.32
CPNE4-210ENST00000512332 C20orf203Q8NBC4 194 aa6.8□□□□□ -1.32
CPNE4-210ENST00000512332 C4orf3Q8WVX3 66 aa6.8□□□□□ -1.32
CPNE4-210ENST00000512332 G3V4G9 280 aa6.79□□□□□ -1.32
CPNE4-210ENST00000512332 RRN3P1Q2M238 152 aa6.79□□□□□ -1.32
CPNE4-210ENST00000512332 CD300EQ496F6 205 aaPredicted RBP6.79□□□□□ -1.32
CPNE4-210ENST00000512332 TMEM86BQ8N661 226 aa6.79□□□□□ -1.32
CPNE4-210ENST00000512332 VPS25Q9BRG1 176 aa6.79□□□□□ -1.32
CPNE4-210ENST00000512332 LINC00467Q9BRT7 94 aa6.79□□□□□ -1.32
CPNE4-210ENST00000512332 CR1P17927 2039 aa6.79□□□□□ -1.32
CPNE4-210ENST00000512332 DOPEY2Q9Y3R5 2298 aa6.79□□□□□ -1.32
CPNE4-210ENST00000512332 F8W1H4 67 aa6.78□□□□□ -1.32
CPNE4-210ENST00000512332 PRB1P04280 392 aa6.78□□□□□ -1.32
CPNE4-210ENST00000512332 RBMY1A1P0DJD3 496 aaKnown RBP6.78□□□□□ -1.32
CPNE4-210ENST00000512332 RBMY1CP0DJD4 496 aa6.78□□□□□ -1.32
CPNE4-210ENST00000512332 CRYBA4P53673 196 aa6.78□□□□□ -1.32
CPNE4-210ENST00000512332 SLURP1P55000 103 aa6.78□□□□□ -1.32
CPNE4-210ENST00000512332 DEFB131AP59861 70 aa6.78□□□□□ -1.32
CPNE4-210ENST00000512332 RBMY1FQ15415 496 aaKnown RBP6.78□□□□□ -1.32
CPNE4-210ENST00000512332 SCGB1D4Q6XE38 83 aa6.78□□□□□ -1.32
CPNE4-210ENST00000512332 ZNF843Q8N446 348 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms