RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 C4orf33Q8N1A6 199 aa0.36□□□□□ -2.35
TRAPPC11-207ENST00000511409 C20orf197Q8N268 126 aa0.36□□□□□ -2.35
TRAPPC11-207ENST00000511409 DPH3Q96FX2 82 aa0.36□□□□□ -2.35
TRAPPC11-207ENST00000511409 TMEM191AQ9H0A3 160 aa0.36□□□□□ -2.35
TRAPPC11-207ENST00000511409 PTPRGP23470 1445 aa0.36□□□□□ -2.35
TRAPPC11-207ENST00000511409 MDN1Q9NU22 5596 aa0.36□□□□□ -2.35
TRAPPC11-207ENST00000511409 CACNA1EQ15878 2313 aa0.36□□□□□ -2.35
TRAPPC11-207ENST00000511409 ZCCHC6Q5VYS8 1495 aaKnown RBP0.35□□□□□ -2.35
TRAPPC11-207ENST00000511409 CPDO75976 1380 aa0.35□□□□□ -2.35
TRAPPC11-207ENST00000511409 A0A096LNT2 108 aa0.35□□□□□ -2.35
TRAPPC11-207ENST00000511409 TRBV7-1A0A0A6YYK4 115 aa0.35□□□□□ -2.35
TRAPPC11-207ENST00000511409 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
TRAPPC11-207ENST00000511409 NDUFA2O43678 99 aa0.35□□□□□ -2.35
TRAPPC11-207ENST00000511409 SMIM6P0DI80 62 aa0.35□□□□□ -2.35
TRAPPC11-207ENST00000511409 CBLN1P23435 193 aa0.35□□□□□ -2.35
TRAPPC11-207ENST00000511409 SPTSSBQ8NFR3 76 aa0.35□□□□□ -2.35
TRAPPC11-207ENST00000511409 COX7B2Q8TF08 81 aa0.35□□□□□ -2.35
TRAPPC11-207ENST00000511409 SDF2Q99470 211 aa0.35□□□□□ -2.35
TRAPPC11-207ENST00000511409 SEC11CQ9BY50 192 aa0.35□□□□□ -2.35
TRAPPC11-207ENST00000511409 V9GYV3 84 aa0.35□□□□□ -2.35
TRAPPC11-207ENST00000511409 SYNJ1O43426 1573 aa0.35□□□□□ -2.35
TRAPPC11-207ENST00000511409 KDM5CP41229 1560 aa0.35□□□□□ -2.35
TRAPPC11-207ENST00000511409 ERCC6Q03468 1493 aa0.35□□□□□ -2.35
TRAPPC11-207ENST00000511409 GNG7O60262 68 aa0.34□□□□□ -2.36
TRAPPC11-207ENST00000511409 PITX3O75364 302 aa0.34□□□□□ -2.36
TRAPPC11-207ENST00000511409 KRTAP2-3P0C7H8 128 aa0.34□□□□□ -2.36
TRAPPC11-207ENST00000511409 HIST1H1DP16402 221 aaKnown RBP0.34□□□□□ -2.36
TRAPPC11-207ENST00000511409 CCL3L1P16619 93 aa0.34□□□□□ -2.36
TRAPPC11-207ENST00000511409 NPC2P61916 151 aa0.34□□□□□ -2.36
TRAPPC11-207ENST00000511409 SARNPP82979 210 aaKnown RBP0.34□□□□□ -2.36
TRAPPC11-207ENST00000511409 EMX2Q04743 252 aa0.34□□□□□ -2.36
TRAPPC11-207ENST00000511409 S100A7L2Q5SY68 101 aa0.34□□□□□ -2.36
TRAPPC11-207ENST00000511409 SLC48A1Q6P1K1 146 aa0.34□□□□□ -2.36
TRAPPC11-207ENST00000511409 ARL11Q969Q4 196 aa0.34□□□□□ -2.36
TRAPPC11-207ENST00000511409 PDCD10Q9BUL8 212 aa0.34□□□□□ -2.36
TRAPPC11-207ENST00000511409 KRTAP2-4Q9BYR9 128 aa0.34□□□□□ -2.36
TRAPPC11-207ENST00000511409 KRTAP2-1Q9BYU5 128 aa0.34□□□□□ -2.36
TRAPPC11-207ENST00000511409 LINC00470Q9BZP3 86 aa0.34□□□□□ -2.36
TRAPPC11-207ENST00000511409 IBTKQ9P2D0 1353 aaPredicted RBP0.33□□□□□ -2.36
TRAPPC11-207ENST00000511409 APODP05090 189 aa0.33□□□□□ -2.36
TRAPPC11-207ENST00000511409 MEIG1Q5JSS6 88 aa0.33□□□□□ -2.36
TRAPPC11-207ENST00000511409 VMO1Q7Z5L0 202 aa0.33□□□□□ -2.36
TRAPPC11-207ENST00000511409 PRR15LQ9BU68 103 aa0.33□□□□□ -2.36
TRAPPC11-207ENST00000511409 BPESC1Q9GZL8 116 aa0.33□□□□□ -2.36
TRAPPC11-207ENST00000511409 AGPAT4-IT1Q9H0P7 198 aa0.33□□□□□ -2.36
TRAPPC11-207ENST00000511409 ASH1LQ9NR48 2969 aaKnown RBP0.33□□□□□ -2.36
TRAPPC11-207ENST00000511409 SCP2D1Q9UJQ7 156 aa0.33□□□□□ -2.36
TRAPPC11-207ENST00000511409 CDK12Q9NYV4 1490 aaPredicted RBP0.33□□□□□ -2.36
TRAPPC11-207ENST00000511409 AFDNP55196 1824 aaKnown RBP0.33□□□□□ -2.36
TRAPPC11-207ENST00000511409 TNCP24821 2201 aa0.33□□□□□ -2.36
TRAPPC11-207ENST00000511409 UNC13AQ9UPW8 1703 aa0.33□□□□□ -2.36
TRAPPC11-207ENST00000511409 HELZP42694 1942 aaKnown RBP0.32□□□□□ -2.36
TRAPPC11-207ENST00000511409 BLMP54132 1417 aaPredicted RBP0.32□□□□□ -2.36
TRAPPC11-207ENST00000511409 APCP25054 2843 aa0.32□□□□□ -2.36
TRAPPC11-207ENST00000511409 K7EP13 123 aa0.32□□□□□ -2.36
TRAPPC11-207ENST00000511409 ACYP2P14621 99 aa0.32□□□□□ -2.36
TRAPPC11-207ENST00000511409 EDDM3BP56851 147 aa0.32□□□□□ -2.36
TRAPPC11-207ENST00000511409 SPINK6Q6UWN8 80 aa0.32□□□□□ -2.36
TRAPPC11-207ENST00000511409 ZNF818PQ6ZRF7 136 aa0.32□□□□□ -2.36
TRAPPC11-207ENST00000511409 SMIM11BQ8TCY0 68 aa0.32□□□□□ -2.36
TRAPPC11-207ENST00000511409 C1orf54Q8WWF1 131 aa0.32□□□□□ -2.36
TRAPPC11-207ENST00000511409 RERGLQ9H628 205 aa0.32□□□□□ -2.36
TRAPPC11-207ENST00000511409 NAA60Q9H7X0 242 aa0.32□□□□□ -2.36
TRAPPC11-207ENST00000511409 KIDINS220Q9ULH0 1771 aa0.32□□□□□ -2.36
TRAPPC11-207ENST00000511409 SPAG17Q6Q759 2223 aa0.32□□□□□ -2.36
TRAPPC11-207ENST00000511409 XIRP1Q702N8 1843 aaKnown RBP0.31□□□□□ -2.36
TRAPPC11-207ENST00000511409 PRG4Q92954 1404 aaPredicted RBP0.31□□□□□ -2.36
TRAPPC11-207ENST00000511409 TRGV1A0A0A0MS02 117 aa0.31□□□□□ -2.36
TRAPPC11-207ENST00000511409 EFCAB10A6NFE3 127 aa0.31□□□□□ -2.36
TRAPPC11-207ENST00000511409 APOC4-APOC2K7ER74 178 aa0.31□□□□□ -2.36
TRAPPC11-207ENST00000511409 GCHFRP30047 84 aa0.31□□□□□ -2.36
TRAPPC11-207ENST00000511409 CCL8P80075 99 aa0.31□□□□□ -2.36
TRAPPC11-207ENST00000511409 Q56UQ5 140 aa0.31□□□□□ -2.36
TRAPPC11-207ENST00000511409 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.31□□□□□ -2.36
TRAPPC11-207ENST00000511409 C10orf82Q8WW14 230 aa0.31□□□□□ -2.36
TRAPPC11-207ENST00000511409 PPP3R2Q96LZ3 170 aa0.31□□□□□ -2.36
TRAPPC11-207ENST00000511409 AQP10Q96PS8 301 aa0.31□□□□□ -2.36
TRAPPC11-207ENST00000511409 SNRNP25Q9BV90 132 aaKnown RBP0.31□□□□□ -2.36
TRAPPC11-207ENST00000511409 LINC00312Q9Y6C7 94 aa0.31□□□□□ -2.36
TRAPPC11-207ENST00000511409 RBBP6Q7Z6E9 1792 aaKnown RBP0.31□□□□□ -2.36
TRAPPC11-207ENST00000511409 LRP5O75197 1615 aa0.31□□□□□ -2.36
TRAPPC11-207ENST00000511409 TMEM2Q9UHN6 1383 aa0.31□□□□□ -2.36
TRAPPC11-207ENST00000511409 RREB1Q92766 1687 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 NAIPQ13075 1403 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 NAV2Q8IVL1 2488 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 GVQW2A0A096LPI5 108 aaPredicted RBP0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 TRBV10-3A0A0K0K1G6 114 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 HCG22E2RYF7 251 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 SIX6O95475 246 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 IFNGP01579 166 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 APOC2P02655 101 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 AKAIN1P0CW23 69 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 FGF7P21781 194 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 RBM3P98179 157 aaKnown RBP0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 COX6A2Q02221 97 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 INSL4Q14641 139 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 C10orf128Q5T292 105 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 C12orf73Q69YU5 71 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 RPL13AP3Q6NVV1 102 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 Q6ZRX8 168 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms