RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 Q6ZRP5 223 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 ORMDL3Q8N138 153 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 ZNF799Q96GE5 643 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 CYYR1Q96J86 154 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 TM2D3Q9BRN9 247 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 RBM12B-AS1Q9P1G2 102 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 SPAG17Q6Q759 2223 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 ARHGAP21Q5T5U3 1957 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 LRRK1Q38SD2 2015 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 BDP1A6H8Y1 2624 aa3.4□□□□□ -1.86
HMGB3P13-201ENST00000511263 TDRD6O60522 2096 aaKnown RBP3.4□□□□□ -1.86
HMGB3P13-201ENST00000511263 IGHV3OR16-10A0A075B7F0 116 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGKV2D-26A0A0A0MRZ7 120 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 TRAV12-1A0A0B4J245 112 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 TRAV41A0A0B4J266 112 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 A0A1W2PNU3 283 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 LINC01546A6NGU7 62 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 H3BSH0 61 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 CLPSP04118 112 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 RBM3P98179 157 aaKnown RBP3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 PAX8Q06710 450 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 KISS1Q15726 138 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 PVRIGQ6DKI7 326 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 FP248Q71RG6 208 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 WDR86Q86TI4 376 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 Q8N8P6 123 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 TMEM75Q8N9X5 138 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 Q8NBF4 154 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 SLC50A1Q9BRV3 221 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 U3KQK5 164 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 RAI1Q7Z5J4 1906 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 PI4KAP42356 2102 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 PCDH15Q96QU1 1955 aa3.4□□□□□ -1.87
HMGB3P13-201ENST00000511263 PHF3Q92576 2039 aaKnown RBP3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 SDK1Q7Z5N4 2213 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 UNC13CQ8NB66 2214 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGKV1D-8A0A087WSZ0 117 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 A0A096LNJ9 63 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 TRBV7-1A0A0A6YYK4 115 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 SRRM4A7MD48 611 aaKnown RBP3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 STATHP02808 62 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 CCKP06307 115 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 RNASE2P10153 161 aaKnown RBP3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 EDDM3BP56851 147 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 FGF12P61328 243 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 UBE2BP63146 152 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 KLKP1Q107X0 134 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 PLGLAQ15195 96 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 Q1RN00 199 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 HIGD2BQ4VC39 106 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 Q6ZR03 302 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 COX8CQ7Z4L0 72 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 C11orf45Q8TAV5 145 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 DYNLRB2Q8TF09 96 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 SPTSSAQ969W0 71 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 OVOL2Q9BRP0 275 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 DCTN5Q9BTE1 182 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 C11orf68Q9H3H3 251 aaKnown RBP3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 PTPRZ1P23471 2315 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 SEC16AO15027 2179 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 CACNA1HO95180 2353 aa3.39□□□□□ -1.87
HMGB3P13-201ENST00000511263 ASXL3Q9C0F0 2248 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGLV1-36A0A0B4J1U3 117 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 WI2-2373I1.2A0A1W2PRP0 233 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 ZNF815PA8K554 130 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 IQCF6A8MYZ5 107 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 F8VRH5 84 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 K7EQD1 137 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGKV1D-16P01601 117 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGHV3-13P01766 116 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 LMO4P61968 165 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 FAM222AQ5U5X8 452 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 ZNF818PQ6ZRF7 136 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 Q6ZVQ6 151 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 CD177Q8N6Q3 437 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 SLC25A29Q8N8R3 303 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 C5orf42Q9H799 3197 aa3.38□□□□□ -1.87
HMGB3P13-201ENST00000511263 ARID1AO14497 2285 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 CEP192Q8TEP8 1941 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 TRAV7A0A075B6U4 112 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGHV4-30-2A0A087WSY4 118 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 TRAV13-2A0A0B4J235 113 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGHV3-20A0A0C4DH32 117 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 IBA57-AS1B1ANH7 110 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 C8orf87E5RJ46 101 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 J3QT63 122 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 M0R135 149 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 NXPH4O95158 308 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGHV3-33P01772 117 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 XCL1P47992 114 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 ZNF826PQ6ZT77 177 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 MKXQ8IYA7 352 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 PGLYRP4Q96LB8 373 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 ZNF714Q96N38 554 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 XCL2Q9UBD3 114 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 PCNX3Q9H6A9 2034 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 ZNF318Q5VUA4 2279 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 UNC80Q8N2C7 3258 aa3.37□□□□□ -1.87
HMGB3P13-201ENST00000511263 GPR179Q6PRD1 2367 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms