RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, human

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-222	ENST00000510545	FOSL1	P15407	271 aa		11.86	□□□□□ -0.51
CLDND1-222	ENST00000510545	BATF	Q16520	125 aa		11.86	□□□□□ -0.51
CLDND1-222	ENST00000510545	RASL10A	Q92737	203 aa		11.86	□□□□□ -0.51
CLDND1-222	ENST00000510545	DEFB125	Q8N687	156 aa		11.86	□□□□□ -0.51
CLDND1-222	ENST00000510545		Q8N8P6	123 aa		11.86	□□□□□ -0.51
CLDND1-222	ENST00000510545	RPL39L	Q96EH5	51 aa	Known RBP	11.86	□□□□□ -0.51
CLDND1-222	ENST00000510545	UQCR10	Q9UDW1	63 aa		11.86	□□□□□ -0.51
CLDND1-222	ENST00000510545	PRSS47	A8MTI9	375 aa		11.85	□□□□□ -0.51
CLDND1-222	ENST00000510545	HBD	P02042	147 aa		11.85	□□□□□ -0.51
CLDND1-222	ENST00000510545	IGLC3	P0DOY3	106 aa		11.85	□□□□□ -0.51
CLDND1-222	ENST00000510545	POM121L12	Q8N7R1	296 aa		11.85	□□□□□ -0.51
CLDND1-222	ENST00000510545	MAP1LC3C	Q9BXW4	147 aa		11.85	□□□□□ -0.51
CLDND1-222	ENST00000510545	NXT2	Q9NPJ8	142 aa	Known RBP	11.85	□□□□□ -0.51
CLDND1-222	ENST00000510545	TENM1	Q9UKZ4	2725 aa		11.85	□□□□□ -0.51
CLDND1-222	ENST00000510545		A0A087WWL8	130 aa		11.84	□□□□□ -0.51
CLDND1-222	ENST00000510545		H0Y8G0	127 aa		11.84	□□□□□ -0.51
CLDND1-222	ENST00000510545	HTN1	P15515	57 aa		11.84	□□□□□ -0.51
CLDND1-222	ENST00000510545	ZNF25	P17030	456 aa	Predicted RBP	11.84	□□□□□ -0.51
CLDND1-222	ENST00000510545	VWF	P04275	2813 aa		11.84	□□□□□ -0.51
CLDND1-222	ENST00000510545	CBY3	A6NI87	242 aa		11.84	□□□□□ -0.51
CLDND1-222	ENST00000510545	CRLF1	O75462	422 aa		11.84	□□□□□ -0.51
CLDND1-222	ENST00000510545	IGLV1-51	P01701	117 aa		11.84	□□□□□ -0.51
CLDND1-222	ENST00000510545	NDUFA11	Q86Y39	141 aa		11.84	□□□□□ -0.51
CLDND1-222	ENST00000510545		Q6ZN92	141 aa		11.83	□□□□□ -0.52
CLDND1-222	ENST00000510545	OR11H12	B2RN74	326 aa		11.83	□□□□□ -0.52
CLDND1-222	ENST00000510545	PET117	Q6UWS5	81 aa		11.83	□□□□□ -0.52
CLDND1-222	ENST00000510545	PMCHL2	Q9BQD1	86 aa		11.83	□□□□□ -0.52
CLDND1-222	ENST00000510545	TRGV11	A0A075B6L2	103 aa		11.82	□□□□□ -0.52
CLDND1-222	ENST00000510545	FCER1G	P30273	86 aa		11.81	□□□□□ -0.52
CLDND1-222	ENST00000510545	HNRNPA3	P51991	378 aa	Known RBP	11.81	□□□□□ -0.52
CLDND1-222	ENST00000510545	F8	P00451	2351 aa		11.81	□□□□□ -0.52
CLDND1-222	ENST00000510545	SMIM17	P0DL12	118 aa		11.81	□□□□□ -0.52
CLDND1-222	ENST00000510545	SUMO2	P61956	95 aa	Known RBP	11.81	□□□□□ -0.52
CLDND1-222	ENST00000510545	TRPT1	Q86TN4	253 aa	Known RBP	11.81	□□□□□ -0.52
CLDND1-222	ENST00000510545	STH	Q8IWL8	128 aa		11.81	□□□□□ -0.52
CLDND1-222	ENST00000510545	CLUHP3	Q96NS8	147 aa		11.81	□□□□□ -0.52
CLDND1-222	ENST00000510545	SMIM2	Q9BVW6	85 aa		11.81	□□□□□ -0.52
CLDND1-222	ENST00000510545	WFDC10A	Q9H1F0	79 aa		11.81	□□□□□ -0.52
CLDND1-222	ENST00000510545	XCL2	Q9UBD3	114 aa		11.81	□□□□□ -0.52
CLDND1-222	ENST00000510545	TRAV9-2	A0A087WT02	112 aa		11.8	□□□□□ -0.52
CLDND1-222	ENST00000510545	CRYGD	P07320	174 aa		11.8	□□□□□ -0.52
CLDND1-222	ENST00000510545	ZNF876P	Q49A33	203 aa		11.8	□□□□□ -0.52
CLDND1-222	ENST00000510545	LINC01545	Q5VT33	79 aa		11.8	□□□□□ -0.52
CLDND1-222	ENST00000510545	SUMO4	Q6EEV6	95 aa		11.8	□□□□□ -0.52
CLDND1-222	ENST00000510545	TMEM158	Q8WZ71	300 aa		11.8	□□□□□ -0.52
CLDND1-222	ENST00000510545	COL5A1-AS1	Q5SY13	56 aa		11.8	□□□□□ -0.52
CLDND1-222	ENST00000510545	FAM74A4	Q5TZK3	123 aa		11.8	□□□□□ -0.52
CLDND1-222	ENST00000510545	SYT8	Q8NBV8	401 aa		11.8	□□□□□ -0.52
CLDND1-222	ENST00000510545	TMEM208	Q9BTX3	173 aa		11.8	□□□□□ -0.52
CLDND1-222	ENST00000510545	LINC00482	Q8N8I6	264 aa		11.79	□□□□□ -0.52
CLDND1-222	ENST00000510545	C18orf15	Q96N68	181 aa		11.79	□□□□□ -0.52
CLDND1-222	ENST00000510545	C20orf78	Q9BR46	151 aa		11.79	□□□□□ -0.52
CLDND1-222	ENST00000510545	C19orf73	Q9NVV2	129 aa		11.79	□□□□□ -0.52
CLDND1-222	ENST00000510545	INS	P01308	110 aa		11.78	□□□□□ -0.52
CLDND1-222	ENST00000510545	IGLL1	P15814	213 aa		11.78	□□□□□ -0.52
CLDND1-222	ENST00000510545	LAGE3	Q14657	143 aa		11.78	□□□□□ -0.52
CLDND1-222	ENST00000510545	BEAN1	Q3B7T3	259 aa		11.78	□□□□□ -0.52
CLDND1-222	ENST00000510545	SPATA3	Q8NHX4	192 aa		11.78	□□□□□ -0.52
CLDND1-222	ENST00000510545	IFI27L1	Q96BM0	104 aa		11.78	□□□□□ -0.52
CLDND1-222	ENST00000510545	LINC01587	Q99440	93 aa		11.78	□□□□□ -0.52
CLDND1-222	ENST00000510545	C20orf202	A1L168	122 aa		11.78	□□□□□ -0.52
CLDND1-222	ENST00000510545		F5H697	171 aa		11.78	□□□□□ -0.52
CLDND1-222	ENST00000510545	hDV102S1	A0JD36	115 aa		11.77	□□□□□ -0.52
CLDND1-222	ENST00000510545	DLEU1	O43261	78 aa		11.77	□□□□□ -0.52
CLDND1-222	ENST00000510545	PF4	P02776	101 aa		11.77	□□□□□ -0.52
CLDND1-222	ENST00000510545	C1orf158	Q8N1D5	194 aa		11.77	□□□□□ -0.52
CLDND1-222	ENST00000510545	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.77	□□□□□ -0.52
CLDND1-222	ENST00000510545	ATR	Q13535	2644 aa		11.77	□□□□□ -0.53
CLDND1-222	ENST00000510545	NEGR1	Q7Z3B1	354 aa		11.77	□□□□□ -0.53
CLDND1-222	ENST00000510545	C11orf72	Q8NBR9	251 aa		11.77	□□□□□ -0.53
CLDND1-222	ENST00000510545	LINC00467	Q9BRT7	94 aa		11.76	□□□□□ -0.53
CLDND1-222	ENST00000510545	NOTCH3	Q9UM47	2321 aa		11.76	□□□□□ -0.53
CLDND1-222	ENST00000510545	GAGE1	Q13065	139 aa		11.75	□□□□□ -0.53
CLDND1-222	ENST00000510545	STPG4	Q8N801	248 aa		11.75	□□□□□ -0.53
CLDND1-222	ENST00000510545	CSTL1	Q9H114	145 aa		11.75	□□□□□ -0.53
CLDND1-222	ENST00000510545	GIG44	P09565	113 aa	Predicted RBP	11.75	□□□□□ -0.53
CLDND1-222	ENST00000510545	AZU1	P20160	251 aa		11.75	□□□□□ -0.53
CLDND1-222	ENST00000510545	MORN3	Q6PF18	240 aa	Predicted RBP	11.75	□□□□□ -0.53
CLDND1-222	ENST00000510545	MRPS16	Q9Y3D3	137 aa	Known RBP	11.75	□□□□□ -0.53
CLDND1-222	ENST00000510545	TRRAP	Q9Y4A5	3859 aa		11.74	□□□□□ -0.53
CLDND1-222	ENST00000510545		M0QY20	66 aa		11.74	□□□□□ -0.53
CLDND1-222	ENST00000510545	PPP1R17	O96001	155 aa		11.74	□□□□□ -0.53
CLDND1-222	ENST00000510545	ZNF56	Q15929	161 aa		11.74	□□□□□ -0.53
CLDND1-222	ENST00000510545	GOLT1B	Q9Y3E0	138 aa		11.74	□□□□□ -0.53
CLDND1-222	ENST00000510545	TEP1	Q99973	2627 aa	Known RBP	11.74	□□□□□ -0.53
CLDND1-222	ENST00000510545	IGHV3OR16-12	A0A075B7B8	117 aa		11.74	□□□□□ -0.53
CLDND1-222	ENST00000510545	NUDT3	O95989	172 aa		11.74	□□□□□ -0.53
CLDND1-222	ENST00000510545	NPS	P0C0P6	89 aa		11.74	□□□□□ -0.53
CLDND1-222	ENST00000510545	POLR2K	P53803	58 aa	Known RBP	11.74	□□□□□ -0.53
CLDND1-222	ENST00000510545	ZNF415	Q09FC8	603 aa		11.74	□□□□□ -0.53
CLDND1-222	ENST00000510545	LGALS9B	Q3B8N2	356 aa		11.74	□□□□□ -0.53
CLDND1-222	ENST00000510545	LGALS9C	Q6DKI2	356 aa		11.74	□□□□□ -0.53
CLDND1-222	ENST00000510545	DEFB104A	Q8WTQ1	72 aa		11.74	□□□□□ -0.53
CLDND1-222	ENST00000510545	FAM110A	Q9BQ89	295 aa		11.74	□□□□□ -0.53
CLDND1-222	ENST00000510545	ST20	Q9HBF5	79 aa		11.74	□□□□□ -0.53
CLDND1-222	ENST00000510545		M0R2P5	195 aa		11.73	□□□□□ -0.53
CLDND1-222	ENST00000510545	CMC4	P56277	68 aa	Predicted RBP	11.73	□□□□□ -0.53
CLDND1-222	ENST00000510545	HINT1	P49773	126 aa	Predicted RBP	11.72	□□□□□ -0.53
CLDND1-222	ENST00000510545	DKK2	Q9UBU2	259 aa		11.72	□□□□□ -0.53
CLDND1-222	ENST00000510545	IGHV3-73	A0A0B4J1V6	119 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 74 ms