RNA–Protein interactions for RNA: ENST00000509967.6

TRIO-214, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-214ENST00000509967 DOCK11Q5JSL3 2073 aa7.12□□□□□ -1.27
TRIO-214ENST00000509967 IGHV3-16A0A0C4DH30 117 aa7.12□□□□□ -1.27
TRIO-214ENST00000509967 A0A0J9YXY3 114 aa7.12□□□□□ -1.27
TRIO-214ENST00000509967 NTN5Q8WTR8 489 aaPredicted RBP7.12□□□□□ -1.27
TRIO-214ENST00000509967 MYO7BQ6PIF6 2116 aa7.11□□□□□ -1.27
TRIO-214ENST00000509967 ZNF407Q9C0G0 2248 aa7.11□□□□□ -1.27
TRIO-214ENST00000509967 TRBV7-3A0A075B6L6 115 aa7.11□□□□□ -1.27
TRIO-214ENST00000509967 PFN2P35080 140 aa7.11□□□□□ -1.27
TRIO-214ENST00000509967 ZNF295-AS1Q8N0V1 137 aa7.11□□□□□ -1.27
TRIO-214ENST00000509967 OTOGLQ3ZCN5 2332 aa7.11□□□□□ -1.27
TRIO-214ENST00000509967 A0A0B4J2C4 111 aa7.11□□□□□ -1.27
TRIO-214ENST00000509967 TAX1BP3O14907 124 aa7.11□□□□□ -1.27
TRIO-214ENST00000509967 LOXL1Q08397 574 aaPredicted RBP7.11□□□□□ -1.27
TRIO-214ENST00000509967 LINC01620Q4KN68 170 aa7.11□□□□□ -1.27
TRIO-214ENST00000509967 U3KQK5 164 aa7.11□□□□□ -1.27
TRIO-214ENST00000509967 SHANK1Q9Y566 2161 aa7.11□□□□□ -1.27
TRIO-214ENST00000509967 A0A0J9YX75 114 aa7.11□□□□□ -1.27
TRIO-214ENST00000509967 ATOX1O00244 68 aa7.11□□□□□ -1.27
TRIO-214ENST00000509967 BAALC-AS2P0C853 105 aa7.11□□□□□ -1.27
TRIO-214ENST00000509967 C20orf203Q8NBC4 194 aa7.11□□□□□ -1.27
TRIO-214ENST00000509967 ADAMTS9Q9P2N4 1935 aa7.1□□□□□ -1.27
TRIO-214ENST00000509967 TRBV10-2A0A0K0K1G8 114 aa7.1□□□□□ -1.27
TRIO-214ENST00000509967 C15orf53Q8NAA6 179 aa7.1□□□□□ -1.27
TRIO-214ENST00000509967 COX7B2Q8TF08 81 aa7.1□□□□□ -1.27
TRIO-214ENST00000509967 IGHV1-58A0A0C4DH39 117 aa7.1□□□□□ -1.27
TRIO-214ENST00000509967 K7ERJ3 54 aa7.1□□□□□ -1.27
TRIO-214ENST00000509967 Q8N1Y9 231 aa7.1□□□□□ -1.27
TRIO-214ENST00000509967 ZNF625Q96I27 306 aaPredicted RBP7.1□□□□□ -1.27
TRIO-214ENST00000509967 RITA1Q96K30 269 aa7.1□□□□□ -1.27
TRIO-214ENST00000509967 TMEM126AQ9H061 195 aa7.1□□□□□ -1.27
TRIO-214ENST00000509967 TRAV4A0A0B4J268 109 aa7.1□□□□□ -1.27
TRIO-214ENST00000509967 A0A1W2PNU3 283 aaPredicted RBP7.1□□□□□ -1.27
TRIO-214ENST00000509967 SPART-AS1P0CW21 52 aa7.1□□□□□ -1.27
TRIO-214ENST00000509967 BRWD1-AS2P59051 145 aa7.1□□□□□ -1.27
TRIO-214ENST00000509967 SPANXB1Q9NS25 103 aaPredicted RBP7.1□□□□□ -1.27
TRIO-214ENST00000509967 ANGP03950 147 aaKnown RBP7.09□□□□□ -1.27
TRIO-214ENST00000509967 SVIPQ8NHG7 77 aa7.09□□□□□ -1.27
TRIO-214ENST00000509967 RPL39LQ96EH5 51 aaKnown RBP7.09□□□□□ -1.27
TRIO-214ENST00000509967 VSIG2Q96IQ7 327 aa7.09□□□□□ -1.27
TRIO-214ENST00000509967 CDH23Q9H251 3354 aa7.09□□□□□ -1.27
TRIO-214ENST00000509967 SPTAN1Q13813 2472 aaKnown RBP7.09□□□□□ -1.27
TRIO-214ENST00000509967 TINCRA0A1B0GVN0 87 aa7.09□□□□□ -1.27
TRIO-214ENST00000509967 COX7A2LO14548 114 aa7.09□□□□□ -1.27
TRIO-214ENST00000509967 TMEM263Q8WUH6 116 aaKnown RBP7.09□□□□□ -1.27
TRIO-214ENST00000509967 PRB4P10163 310 aaPredicted RBP7.09□□□□□ -1.27
TRIO-214ENST00000509967 NOP10Q9NPE3 64 aaKnown RBP7.09□□□□□ -1.27
TRIO-214ENST00000509967 CHD3Q12873 2000 aaKnown RBP7.09□□□□□ -1.27
TRIO-214ENST00000509967 IGHV3-38A0A0C4DH36 116 aa7.09□□□□□ -1.28
TRIO-214ENST00000509967 LY6LH3BQJ8 138 aa7.09□□□□□ -1.28
TRIO-214ENST00000509967 A4D1N5 150 aa7.08□□□□□ -1.28
TRIO-214ENST00000509967 F6UB75 175 aa7.08□□□□□ -1.28
TRIO-214ENST00000509967 PROP1O75360 226 aa7.08□□□□□ -1.28
TRIO-214ENST00000509967 IGHV4-38-2P0DP08 117 aa7.08□□□□□ -1.28
TRIO-214ENST00000509967 Q6ZPA2 131 aa7.08□□□□□ -1.28
TRIO-214ENST00000509967 MUSTN1Q8IVN3 82 aa7.08□□□□□ -1.28
TRIO-214ENST00000509967 A0A0C4DFX4 3053 aa7.08□□□□□ -1.28
TRIO-214ENST00000509967 IGHV4-30-2A0A087WSY4 118 aa7.08□□□□□ -1.28
TRIO-214ENST00000509967 PIK3CD-AS1Q5SR53 167 aa7.08□□□□□ -1.28
TRIO-214ENST00000509967 SND1-IT1Q9HBX3 110 aa7.08□□□□□ -1.28
TRIO-214ENST00000509967 ICE1Q9Y2F5 2266 aa7.08□□□□□ -1.28
TRIO-214ENST00000509967 DIDO1Q9BTC0 2240 aaKnown RBP7.08□□□□□ -1.28
TRIO-214ENST00000509967 OPRPNQ99935 248 aaPredicted RBP7.08□□□□□ -1.28
TRIO-214ENST00000509967 TM2D2Q9BX73 214 aa7.08□□□□□ -1.28
TRIO-214ENST00000509967 EML6Q6ZMW3 1958 aa7.07□□□□□ -1.28
TRIO-214ENST00000509967 XIRP2A4UGR9 3374 aa7.07□□□□□ -1.28
TRIO-214ENST00000509967 A0A0J9YXV3 536 aa7.07□□□□□ -1.28
TRIO-214ENST00000509967 SMIM9A6NGZ8 99 aa7.07□□□□□ -1.28
TRIO-214ENST00000509967 GATA1P15976 413 aaPredicted RBP7.07□□□□□ -1.28
TRIO-214ENST00000509967 RBX1P62877 108 aa7.07□□□□□ -1.28
TRIO-214ENST00000509967 MSMPQ1L6U9 139 aa7.07□□□□□ -1.28
TRIO-214ENST00000509967 MRPL36Q9P0J6 103 aaKnown RBP7.07□□□□□ -1.28
TRIO-214ENST00000509967 PRUNE2Q8WUY3 3088 aa7.07□□□□□ -1.28
TRIO-214ENST00000509967 TMEM258P61165 79 aa7.07□□□□□ -1.28
TRIO-214ENST00000509967 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.07□□□□□ -1.28
TRIO-214ENST00000509967 IGKV2-29A2NJV5 120 aaPredicted RBP7.07□□□□□ -1.28
TRIO-214ENST00000509967 FUSP35637 526 aaKnown RBP eCLIP7.07□□□□□ -1.28
TRIO-214ENST00000509967 LINC00173Q6ZV60 143 aa7.07□□□□□ -1.28
TRIO-214ENST00000509967 MSRB1Q9NZV6 116 aa7.07□□□□□ -1.28
TRIO-214ENST00000509967 SELENOKQ9Y6D0 94 aa7.07□□□□□ -1.28
TRIO-214ENST00000509967 PRAC2D3DTV9 90 aa7.06□□□□□ -1.28
TRIO-214ENST00000509967 FXYD2P54710 66 aa7.06□□□□□ -1.28
TRIO-214ENST00000509967 INTS1Q8N201 2190 aaKnown RBP7.06□□□□□ -1.28
TRIO-214ENST00000509967 GRNP28799 593 aaKnown RBP7.06□□□□□ -1.28
TRIO-214ENST00000509967 FOXI1Q12951 378 aa7.06□□□□□ -1.28
TRIO-214ENST00000509967 Q8NA96 180 aa7.06□□□□□ -1.28
TRIO-214ENST00000509967 C1orf43Q9BWL3 253 aa7.06□□□□□ -1.28
TRIO-214ENST00000509967 IGHV4OR15-8A0A075B7B6 117 aa7.06□□□□□ -1.28
TRIO-214ENST00000509967 A0A087WW49 117 aa7.06□□□□□ -1.28
TRIO-214ENST00000509967 TRBV6-5A0A0K0K1A5 114 aa7.06□□□□□ -1.28
TRIO-214ENST00000509967 MIAQ16674 131 aa7.06□□□□□ -1.28
TRIO-214ENST00000509967 ZMAT4Q9H898 229 aa7.06□□□□□ -1.28
TRIO-214ENST00000509967 WDR87Q6ZQQ6 2873 aa7.06□□□□□ -1.28
TRIO-214ENST00000509967 ZFP36P26651 326 aaKnown RBP7.06□□□□□ -1.28
TRIO-214ENST00000509967 E7EUB6 86 aa7.05□□□□□ -1.28
TRIO-214ENST00000509967 G3V4G9 280 aa7.05□□□□□ -1.28
TRIO-214ENST00000509967 LMO4P61968 165 aa7.05□□□□□ -1.28
TRIO-214ENST00000509967 CFHR3Q02985 330 aa7.05□□□□□ -1.28
TRIO-214ENST00000509967 CCDC140Q96MF4 163 aa7.05□□□□□ -1.28
TRIO-214ENST00000509967 AMTNQ6UX39 209 aa7.05□□□□□ -1.28
TRIO-214ENST00000509967 TP53TG3Q9ULZ0 132 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms