RNA–Protein interactions for RNA: ENST00000509848.5

ARHGEF28-208, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-208ENST00000509848 INAFM2P0DMQ5 153 aa13.21□□□□□ -0.29
ARHGEF28-208ENST00000509848 ZNF674Q2M3X9 581 aa13.21□□□□□ -0.29
ARHGEF28-208ENST00000509848 PHLDA3Q9Y5J5 127 aa13.21□□□□□ -0.29
ARHGEF28-208ENST00000509848 LTAP01374 205 aa13.2□□□□□ -0.3
ARHGEF28-208ENST00000509848 AKR1C3P42330 323 aa13.2□□□□□ -0.3
ARHGEF28-208ENST00000509848 NTN5Q8WTR8 489 aaPredicted RBP13.2□□□□□ -0.3
ARHGEF28-208ENST00000509848 FRZBQ92765 325 aa13.2□□□□□ -0.3
ARHGEF28-208ENST00000509848 SFRP2Q96HF1 295 aa13.2□□□□□ -0.3
ARHGEF28-208ENST00000509848 TRBV6-1A0A0K0K1D8 114 aa13.19□□□□□ -0.3
ARHGEF28-208ENST00000509848 RHODO00212 210 aa13.19□□□□□ -0.3
ARHGEF28-208ENST00000509848 LECT2O14960 151 aa13.19□□□□□ -0.3
ARHGEF28-208ENST00000509848 TPT1P13693 172 aaKnown RBP13.19□□□□□ -0.3
ARHGEF28-208ENST00000509848 LAGE3Q14657 143 aa13.19□□□□□ -0.3
ARHGEF28-208ENST00000509848 LINC01559Q495D7 138 aa13.19□□□□□ -0.3
ARHGEF28-208ENST00000509848 KCNRGQ8N5I3 272 aa13.19□□□□□ -0.3
ARHGEF28-208ENST00000509848 FAM213BQ8TBF2 198 aa13.19□□□□□ -0.3
ARHGEF28-208ENST00000509848 SFT2D1Q8WV19 159 aa13.19□□□□□ -0.3
ARHGEF28-208ENST00000509848 TM2D2Q9BX73 214 aa13.19□□□□□ -0.3
ARHGEF28-208ENST00000509848 FAM30AQ9NZY2 134 aa13.18□□□□□ -0.3
ARHGEF28-208ENST00000509848 RPL19P84098 196 aaKnown RBP13.17□□□□□ -0.3
ARHGEF28-208ENST00000509848 DNAJC30Q96LL9 226 aa13.17□□□□□ -0.3
ARHGEF28-208ENST00000509848 A0A087WWC5 75 aa13.16□□□□□ -0.3
ARHGEF28-208ENST00000509848 SCO2A0A1W2PP80 73 aa13.16□□□□□ -0.3
ARHGEF28-208ENST00000509848 MBD3L1Q8WWY6 194 aa13.16□□□□□ -0.3
ARHGEF28-208ENST00000509848 TCEAL7Q9BRU2 100 aa13.16□□□□□ -0.3
ARHGEF28-208ENST00000509848 TRAV8-3A0A0A6YYJ7 113 aa13.15□□□□□ -0.3
ARHGEF28-208ENST00000509848 SEC11BP0C7V7 166 aa13.15□□□□□ -0.3
ARHGEF28-208ENST00000509848 ZFP82Q8N141 532 aa13.15□□□□□ -0.3
ARHGEF28-208ENST00000509848 TMEM70Q9BUB7 260 aa13.15□□□□□ -0.3
ARHGEF28-208ENST00000509848 ZNF471Q9BX82 626 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF28-208ENST00000509848 ZNF345Q14585 488 aa13.14□□□□□ -0.31
ARHGEF28-208ENST00000509848 NIT1Q86X76 327 aa13.14□□□□□ -0.31
ARHGEF28-208ENST00000509848 BAALCQ8WXS3 180 aa13.14□□□□□ -0.31
ARHGEF28-208ENST00000509848 VPS13BQ7Z7G8 4022 aa13.13□□□□□ -0.31
ARHGEF28-208ENST00000509848 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF28-208ENST00000509848 MUC21A0A0G2JKD1 596 aa13.13□□□□□ -0.31
ARHGEF28-208ENST00000509848 MUC21A0A140T8X8 626 aa13.13□□□□□ -0.31
ARHGEF28-208ENST00000509848 KLK12Q9UKR0 248 aa13.13□□□□□ -0.31
ARHGEF28-208ENST00000509848 URGCP-MRPS24S4R325 110 aa13.13□□□□□ -0.31
ARHGEF28-208ENST00000509848 UMAD1C9J7I0 102 aa13.12□□□□□ -0.31
ARHGEF28-208ENST00000509848 SSTP61278 116 aa13.12□□□□□ -0.31
ARHGEF28-208ENST00000509848 TOR2AQ5JU69 321 aa13.12□□□□□ -0.31
ARHGEF28-208ENST00000509848 BAGE2Q86Y30 109 aa13.12□□□□□ -0.31
ARHGEF28-208ENST00000509848 OR10AG1Q8NH19 301 aa13.12□□□□□ -0.31
ARHGEF28-208ENST00000509848 A0A0D9SG52 128 aa13.11□□□□□ -0.31
ARHGEF28-208ENST00000509848 KANTRA0A1W2PQU2 76 aa13.11□□□□□ -0.31
ARHGEF28-208ENST00000509848 HMSDA8MTL9 139 aa13.11□□□□□ -0.31
ARHGEF28-208ENST00000509848 FAM229AH3BQW9 127 aa13.11□□□□□ -0.31
ARHGEF28-208ENST00000509848 BCL2L11O43521 198 aa13.11□□□□□ -0.31
ARHGEF28-208ENST00000509848 PFDN1O60925 122 aa13.11□□□□□ -0.31
ARHGEF28-208ENST00000509848 RPL36AP83881 106 aaKnown RBP13.11□□□□□ -0.31
ARHGEF28-208ENST00000509848 PRR27Q6MZM9 219 aa13.11□□□□□ -0.31
ARHGEF28-208ENST00000509848 RPL36ALQ969Q0 106 aaKnown RBP13.11□□□□□ -0.31
ARHGEF28-208ENST00000509848 MLST8Q9BVC4 326 aa13.11□□□□□ -0.31
ARHGEF28-208ENST00000509848 DNAH8Q96JB1 4490 aa13.11□□□□□ -0.31
ARHGEF28-208ENST00000509848 IGKV2D-24A0A075B6R9 120 aa13.1□□□□□ -0.31
ARHGEF28-208ENST00000509848 S100A9P06702 114 aaKnown RBP13.1□□□□□ -0.31
ARHGEF28-208ENST00000509848 H2AFB1P0C5Y9 115 aa13.1□□□□□ -0.31
ARHGEF28-208ENST00000509848 UBE2D3P61077 147 aa13.1□□□□□ -0.31
ARHGEF28-208ENST00000509848 UBE2D2P62837 147 aa13.1□□□□□ -0.31
ARHGEF28-208ENST00000509848 LINC01620Q4KN68 170 aa13.1□□□□□ -0.31
ARHGEF28-208ENST00000509848 TRBV7-3A0A075B6L6 115 aa13.09□□□□□ -0.31
ARHGEF28-208ENST00000509848 TRBV10-1A0A0K0K1A3 114 aa13.09□□□□□ -0.31
ARHGEF28-208ENST00000509848 ZNF56Q15929 161 aa13.09□□□□□ -0.31
ARHGEF28-208ENST00000509848 TMUB2Q71RG4 321 aa13.09□□□□□ -0.31
ARHGEF28-208ENST00000509848 UBE2WQ96B02 151 aa13.09□□□□□ -0.31
ARHGEF28-208ENST00000509848 A0A087WX48 190 aa13.08□□□□□ -0.32
ARHGEF28-208ENST00000509848 CCL20P78556 96 aa13.08□□□□□ -0.32
ARHGEF28-208ENST00000509848 TMEM262E9PQX1 116 aa13.07□□□□□ -0.32
ARHGEF28-208ENST00000509848 RAB4BP61018 213 aa13.07□□□□□ -0.32
ARHGEF28-208ENST00000509848 NEXN-AS1Q8NBZ9 246 aa13.07□□□□□ -0.32
ARHGEF28-208ENST00000509848 HERC1Q15751 4861 aa13.07□□□□□ -0.32
ARHGEF28-208ENST00000509848 SPANXN1Q5VSR9 72 aa13.06□□□□□ -0.32
ARHGEF28-208ENST00000509848 OR10G8Q8NGN5 311 aa13.06□□□□□ -0.32
ARHGEF28-208ENST00000509848 RMI2Q96E14 147 aa13.06□□□□□ -0.32
ARHGEF28-208ENST00000509848 DERL1Q9BUN8 251 aa13.06□□□□□ -0.32
ARHGEF28-208ENST00000509848 GNG13Q9P2W3 67 aa13.06□□□□□ -0.32
ARHGEF28-208ENST00000509848 COX11Q9Y6N1 276 aa13.06□□□□□ -0.32
ARHGEF28-208ENST00000509848 SRRM2Q9UQ35 2752 aaKnown RBP13.06□□□□□ -0.32
ARHGEF28-208ENST00000509848 F5H697 171 aa13.05□□□□□ -0.32
ARHGEF28-208ENST00000509848 SNAI2O43623 268 aa13.05□□□□□ -0.32
ARHGEF28-208ENST00000509848 CXCL1P09341 107 aa13.05□□□□□ -0.32
ARHGEF28-208ENST00000509848 RPL35P42766 123 aaKnown RBP13.05□□□□□ -0.32
ARHGEF28-208ENST00000509848 KCNIP4Q6PIL6 250 aa13.05□□□□□ -0.32
ARHGEF28-208ENST00000509848 SSBP4Q9BWG4 385 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF28-208ENST00000509848 TRBV6-8A0A0A6YYG3 113 aa13.04□□□□□ -0.32
ARHGEF28-208ENST00000509848 RBFOX3A6NFN3 312 aa13.04□□□□□ -0.32
ARHGEF28-208ENST00000509848 C1QBP02746 253 aa13.04□□□□□ -0.32
ARHGEF28-208ENST00000509848 OR5AL1P0C617 328 aa13.03□□□□□ -0.32
ARHGEF28-208ENST00000509848 GZMBP10144 247 aa13.03□□□□□ -0.32
ARHGEF28-208ENST00000509848 EIF5AP63241 154 aaKnown RBP13.03□□□□□ -0.32
ARHGEF28-208ENST00000509848 ELOBQ15370 118 aa13.03□□□□□ -0.32
ARHGEF28-208ENST00000509848 Q6ZSA8 131 aa13.03□□□□□ -0.32
ARHGEF28-208ENST00000509848 CHCHD7Q9BUK0 85 aa13.03□□□□□ -0.32
ARHGEF28-208ENST00000509848 ENHOQ6UWT2 76 aa13.02□□□□□ -0.33
ARHGEF28-208ENST00000509848 C15orf54Q8N8G6 183 aa13.02□□□□□ -0.33
ARHGEF28-208ENST00000509848 Q8N976 141 aa13.02□□□□□ -0.33
ARHGEF28-208ENST00000509848 MPV17L2Q567V2 206 aa13.01□□□□□ -0.33
ARHGEF28-208ENST00000509848 CHCHD5Q9BSY4 110 aa13.01□□□□□ -0.33
ARHGEF28-208ENST00000509848 TPPP3Q9BW30 176 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms