RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 GABARAPH6UMI1 98 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 LST1O00453 97 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 RBP4P02753 201 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 ZNF32P17041 273 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 HIST1H2BOP23527 126 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 NPPCP23582 126 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 HLA-DMBP28068 263 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 HIST1H2BBP33778 126 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 HIST1H2BDP58876 126 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 HIST1H2BCP62807 126 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 HIST2H2BEQ16778 126 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.39□□□□□ -2.19
PDE4D-218ENST00000509368 HRCT1Q6UXD1 115 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 ZFP2Q6ZN57 461 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 HIST3H2BBQ8N257 126 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 OR4B1Q8NGF8 309 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 OR4X2Q8NGF9 303 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 OR5C1Q8NGR4 320 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 FNDC9Q8TBE3 224 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 PATE1Q8WXA2 126 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 HIST1H2BHQ93079 126 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 HIST1H2BNQ99877 126 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 HIST1H2BMQ99879 126 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 LINC00574Q9H8X3 128 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 BCL2L10Q9HD36 194 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 COMMD3Q9UBI1 195 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 LINC00588Q9Y4M8 146 aa1.39□□□□□ -2.19
PDE4D-218ENST00000509368 DSCAML1Q8TD84 2053 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 IGLV3-16A0A075B6K0 115 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 IGHV3OR16-8A0A075B7F1 116 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 TRGV10A0A0A0MS01 117 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 A8MWV9 139 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 GEMIN2O14893 280 aaKnown RBP1.38□□□□□ -2.19
PDE4D-218ENST00000509368 EDF1O60869 148 aaKnown RBP1.38□□□□□ -2.19
PDE4D-218ENST00000509368 IGHV3-53P01767 116 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 ZNF705DP0CH99 300 aaPredicted RBP1.38□□□□□ -2.19
PDE4D-218ENST00000509368 OR2T2Q6IF00 324 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 OR4K13Q8NH42 304 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 OTOSQ8NHW6 89 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 UPK3BQ9BT76 320 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 AGPAT4-IT1Q9H0P7 198 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 FKBP11Q9NYL4 201 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 DSPPQ9NZW4 1301 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 LINC00312Q9Y6C7 94 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 COL6A5A8TX70 2615 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 STAB1Q9NY15 2570 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 PRRC2AP48634 2157 aaKnown RBP1.38□□□□□ -2.19
PDE4D-218ENST00000509368 ANK2Q01484 3957 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 MXRA5Q9NR99 2828 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 A0A087WXM4 84 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 LOC100130705A0A1B0GUX0 176 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 A8MUN3 132 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 C4orf51C9J302 202 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 C9JCJ5 164 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 H3BMG7 143 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 APOC4-APOC2K7ER74 178 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 COX7A2LO14548 114 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 SH2D1AO60880 128 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 APOC2P02655 101 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 CTSDP07339 412 aaPredicted RBP1.38□□□□□ -2.19
PDE4D-218ENST00000509368 UBE2BP63146 152 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 SEC11AP67812 179 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 DEFB113Q30KQ7 82 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 LGALS9BQ3B8N2 356 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 Q5BKY6 102 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 Q6ZUT4 128 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 RPP25LQ8N5L8 163 aaKnown RBP1.38□□□□□ -2.19
PDE4D-218ENST00000509368 MORN4Q8NDC4 146 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 MRPS24Q96EL2 167 aaKnown RBP1.38□□□□□ -2.19
PDE4D-218ENST00000509368 LINC00467Q9BRT7 94 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 PCTPQ9UKL6 214 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 SMAD5-AS1Q9Y6J3 95 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 HEATR5AQ86XA9 2040 aa1.38□□□□□ -2.19
PDE4D-218ENST00000509368 KIAA1549Q9HCM3 1950 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 K7EP34 96 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 M0R378 163 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 TAX1BP3O14907 124 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 HIST1H2BKO60814 126 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 HYPMO75409 117 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 PGLYRP1O75594 196 aaPredicted RBP1.37□□□□□ -2.19
PDE4D-218ENST00000509368 HIST1H2BJP06899 126 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 S100A4P26447 101 aaKnown RBP1.37□□□□□ -2.19
PDE4D-218ENST00000509368 SPINT3P49223 89 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 POLR2JP52435 117 aaKnown RBP1.37□□□□□ -2.19
PDE4D-218ENST00000509368 CATR1Q13166 79 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 FAM74A1Q5RGS3 127 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 SPINT4Q6UDR6 99 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 TMEM91Q6ZNR0 172 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 SLC25A26Q70HW3 274 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 RNF182Q8N6D2 247 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 H1FXQ92522 213 aaKnown RBP1.37□□□□□ -2.19
PDE4D-218ENST00000509368 CIB3Q96Q77 187 aaPredicted RBP1.37□□□□□ -2.19
PDE4D-218ENST00000509368 TPRKBQ9Y3C4 175 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 PHLDA3Q9Y5J5 127 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 NBEAL1Q6ZS30 2694 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 FN1P02751 2386 aaKnown RBP1.37□□□□□ -2.19
PDE4D-218ENST00000509368 TRAV2A0A0B4J234 112 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 PIGBOS1A0A0B4J2F0 54 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 LOC107986453A0A1B0GWG9 222 aa1.37□□□□□ -2.19
PDE4D-218ENST00000509368 A8MWP4 228 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms