RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 FHL3Q13643 280 aa10.96□□□□□ -0.65
PHF3-209ENST00000509330 ODF3L2Q3SX64 289 aa10.96□□□□□ -0.65
PHF3-209ENST00000509330 PET117Q6UWS5 81 aa10.96□□□□□ -0.65
PHF3-209ENST00000509330 Q8N8P6 123 aa10.96□□□□□ -0.65
PHF3-209ENST00000509330 ZNF256Q9Y2P7 627 aaPredicted RBP10.96□□□□□ -0.65
PHF3-209ENST00000509330 ATRQ13535 2644 aa10.96□□□□□ -0.65
PHF3-209ENST00000509330 IGLV2-18A0A075B6J9 118 aa10.96□□□□□ -0.66
PHF3-209ENST00000509330 DKK2Q9UBU2 259 aa10.96□□□□□ -0.66
PHF3-209ENST00000509330 ZNF56Q15929 161 aa10.95□□□□□ -0.66
PHF3-209ENST00000509330 ZNF876PQ49A33 203 aa10.95□□□□□ -0.66
PHF3-209ENST00000509330 SUMO2P61956 95 aaKnown RBP10.95□□□□□ -0.66
PHF3-209ENST00000509330 STPG4Q8N801 248 aa10.95□□□□□ -0.66
PHF3-209ENST00000509330 LAMTOR2Q9Y2Q5 125 aa10.95□□□□□ -0.66
PHF3-209ENST00000509330 NUDT3O95989 172 aa10.95□□□□□ -0.66
PHF3-209ENST00000509330 PRSS1P07477 247 aa10.95□□□□□ -0.66
PHF3-209ENST00000509330 HNRNPA3P51991 378 aaKnown RBP10.95□□□□□ -0.66
PHF3-209ENST00000509330 KRTAP10-3P60369 221 aa10.95□□□□□ -0.66
PHF3-209ENST00000509330 SCGB2A2Q13296 93 aa10.95□□□□□ -0.66
PHF3-209ENST00000509330 LINC01545Q5VT33 79 aa10.95□□□□□ -0.66
PHF3-209ENST00000509330 MRAP2Q96G30 205 aa10.95□□□□□ -0.66
PHF3-209ENST00000509330 ODF3Q96PU9 254 aa10.95□□□□□ -0.66
PHF3-209ENST00000509330 SUMO4Q6EEV6 95 aa10.94□□□□□ -0.66
PHF3-209ENST00000509330 SMIM2Q9BVW6 85 aa10.94□□□□□ -0.66
PHF3-209ENST00000509330 UQCR10Q9UDW1 63 aa10.94□□□□□ -0.66
PHF3-209ENST00000509330 GOLT1BQ9Y3E0 138 aa10.94□□□□□ -0.66
PHF3-209ENST00000509330 HSBP1L1C9JCN9 74 aa10.94□□□□□ -0.66
PHF3-209ENST00000509330 FCER1GP30273 86 aa10.94□□□□□ -0.66
PHF3-209ENST00000509330 LAGE3Q14657 143 aa10.94□□□□□ -0.66
PHF3-209ENST00000509330 LINC01587Q99440 93 aa10.93□□□□□ -0.66
PHF3-209ENST00000509330 SPAG8Q99932 426 aaPredicted RBP10.93□□□□□ -0.66
PHF3-209ENST00000509330 C16orf95Q9H693 158 aa10.93□□□□□ -0.66
PHF3-209ENST00000509330 F8P00451 2351 aa10.93□□□□□ -0.66
PHF3-209ENST00000509330 MED14OSP0DP75 135 aa10.93□□□□□ -0.66
PHF3-209ENST00000509330 PROK1P58294 105 aa10.93□□□□□ -0.66
PHF3-209ENST00000509330 LINC00315P59091 139 aa10.93□□□□□ -0.66
PHF3-209ENST00000509330 C9orf85Q96MD7 179 aa10.93□□□□□ -0.66
PHF3-209ENST00000509330 CSTL1Q9H114 145 aa10.93□□□□□ -0.66
PHF3-209ENST00000509330 KIF25-AS1Q9Y6Z4 181 aa10.93□□□□□ -0.66
PHF3-209ENST00000509330 TEP1Q99973 2627 aaKnown RBP10.93□□□□□ -0.66
PHF3-209ENST00000509330 TMEM208Q9BTX3 173 aa10.92□□□□□ -0.66
PHF3-209ENST00000509330 M0R143 59 aa10.92□□□□□ -0.66
PHF3-209ENST00000509330 STHQ8IWL8 128 aa10.92□□□□□ -0.66
PHF3-209ENST00000509330 ADARB2-AS1A8MUL3 147 aa10.92□□□□□ -0.66
PHF3-209ENST00000509330 NACAE9PAV3 2078 aa10.91□□□□□ -0.66
PHF3-209ENST00000509330 TRRAPQ9Y4A5 3859 aa10.91□□□□□ -0.66
PHF3-209ENST00000509330 OR11H12B2RN74 326 aa10.91□□□□□ -0.66
PHF3-209ENST00000509330 NXPH4O95158 308 aa10.9□□□□□ -0.66
PHF3-209ENST00000509330 HINT1P49773 126 aaPredicted RBP10.9□□□□□ -0.66
PHF3-209ENST00000509330 ANKRD39Q53RE8 183 aa10.9□□□□□ -0.66
PHF3-209ENST00000509330 P0DMU3 169 aa10.9□□□□□ -0.66
PHF3-209ENST00000509330 FAM231AP0DMU4 169 aa10.9□□□□□ -0.66
PHF3-209ENST00000509330 FAM231CP0DMU5 169 aa10.9□□□□□ -0.66
PHF3-209ENST00000509330 SYT8Q8NBV8 401 aa10.9□□□□□ -0.66
PHF3-209ENST00000509330 RPL35AP18077 110 aaKnown RBP10.89□□□□□ -0.67
PHF3-209ENST00000509330 CRYGDP07320 174 aa10.89□□□□□ -0.67
PHF3-209ENST00000509330 SPATA3Q8NHX4 192 aa10.89□□□□□ -0.67
PHF3-209ENST00000509330 TRGV11A0A075B6L2 103 aa10.89□□□□□ -0.67
PHF3-209ENST00000509330 PF4P02776 101 aa10.89□□□□□ -0.67
PHF3-209ENST00000509330 AZU1P20160 251 aa10.89□□□□□ -0.67
PHF3-209ENST00000509330 MRPL16Q9NX20 251 aaKnown RBP10.89□□□□□ -0.67
PHF3-209ENST00000509330 ST20Q9HBF5 79 aa10.88□□□□□ -0.67
PHF3-209ENST00000509330 NBEAL2Q6ZNJ1 2754 aa10.88□□□□□ -0.67
PHF3-209ENST00000509330 SDHAF1A6NFY7 115 aa10.87□□□□□ -0.67
PHF3-209ENST00000509330 NMUP48645 174 aa10.87□□□□□ -0.67
PHF3-209ENST00000509330 TMEM160Q9NX00 188 aa10.87□□□□□ -0.67
PHF3-209ENST00000509330 Q9UF83 564 aa10.87□□□□□ -0.67
PHF3-209ENST00000509330 TRAV2A0A0B4J234 112 aa10.87□□□□□ -0.67
PHF3-209ENST00000509330 INSP01308 110 aa10.87□□□□□ -0.67
PHF3-209ENST00000509330 LGALS9BQ3B8N2 356 aa10.87□□□□□ -0.67
PHF3-209ENST00000509330 LGALS9CQ6DKI2 356 aa10.87□□□□□ -0.67
PHF3-209ENST00000509330 JMJD8Q96S16 334 aa10.87□□□□□ -0.67
PHF3-209ENST00000509330 TTTY13Q9BZ97 58 aa10.87□□□□□ -0.67
PHF3-209ENST00000509330 RPL39P62891 51 aaKnown RBP10.86□□□□□ -0.67
PHF3-209ENST00000509330 ZC2HC1BQ5TFG8 222 aa10.86□□□□□ -0.67
PHF3-209ENST00000509330 C2orf66Q6UXQ4 117 aa10.86□□□□□ -0.67
PHF3-209ENST00000509330 SCGB3A1Q96QR1 104 aa10.86□□□□□ -0.67
PHF3-209ENST00000509330 LINC01546A6NGU7 62 aa10.86□□□□□ -0.67
PHF3-209ENST00000509330 ODF1Q14990 250 aa10.86□□□□□ -0.67
PHF3-209ENST00000509330 MORN3Q6PF18 240 aaPredicted RBP10.86□□□□□ -0.67
PHF3-209ENST00000509330 C20orf78Q9BR46 151 aa10.86□□□□□ -0.67
PHF3-209ENST00000509330 MRPL35Q9NZE8 188 aaKnown RBP10.86□□□□□ -0.67
PHF3-209ENST00000509330 SLC25A34Q6PIV7 304 aa10.85□□□□□ -0.67
PHF3-209ENST00000509330 NDUFA7O95182 113 aa10.85□□□□□ -0.67
PHF3-209ENST00000509330 EMP1P54849 157 aa10.85□□□□□ -0.67
PHF3-209ENST00000509330 C2orf88Q9BSF0 95 aa10.85□□□□□ -0.67
PHF3-209ENST00000509330 ORMDL2Q53FV1 153 aa10.84□□□□□ -0.67
PHF3-209ENST00000509330 GTSCR1Q86UQ5 136 aa10.84□□□□□ -0.67
PHF3-209ENST00000509330 PRSS47A8MTI9 375 aa10.84□□□□□ -0.67
PHF3-209ENST00000509330 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.84□□□□□ -0.67
PHF3-209ENST00000509330 M0QY20 66 aa10.84□□□□□ -0.67
PHF3-209ENST00000509330 Q6ZVH6 145 aa10.84□□□□□ -0.67
PHF3-209ENST00000509330 TRAV25A0A0B4J276 109 aa10.83□□□□□ -0.68
PHF3-209ENST00000509330 PCP2Q8IVA1 136 aa10.83□□□□□ -0.68
PHF3-209ENST00000509330 C1orf158Q8N1D5 194 aa10.83□□□□□ -0.68
PHF3-209ENST00000509330 TP53TG1Q9Y2A0 90 aa10.83□□□□□ -0.68
PHF3-209ENST00000509330 A8MTW9 85 aa10.83□□□□□ -0.68
PHF3-209ENST00000509330 IGLV1-51P01701 117 aa10.83□□□□□ -0.68
PHF3-209ENST00000509330 ZNF415Q09FC8 603 aa10.83□□□□□ -0.68
PHF3-209ENST00000509330 ATP5LO75964 103 aa10.83□□□□□ -0.68
PHF3-209ENST00000509330 IGHV3-53P01767 116 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms