RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 FRZBQ92765 325 aa7.44□□□□□ -1.22
RFC1-211ENST00000509084 C18orf15Q96N68 181 aa7.44□□□□□ -1.22
RFC1-211ENST00000509084 RETNQ9HD89 108 aa7.44□□□□□ -1.22
RFC1-211ENST00000509084 MRPL16Q9NX20 251 aaKnown RBP7.44□□□□□ -1.22
RFC1-211ENST00000509084 MSRB1Q9NZV6 116 aa7.44□□□□□ -1.22
RFC1-211ENST00000509084 TRAV4A0A0B4J268 109 aa7.43□□□□□ -1.22
RFC1-211ENST00000509084 NHLRC4P0CG21 123 aaPredicted RBP7.43□□□□□ -1.22
RFC1-211ENST00000509084 SPART-AS1P0CW21 52 aa7.43□□□□□ -1.22
RFC1-211ENST00000509084 EMP1P54849 157 aa7.43□□□□□ -1.22
RFC1-211ENST00000509084 FAM104BQ5XKR9 115 aa7.43□□□□□ -1.22
RFC1-211ENST00000509084 Q6ZTI0 123 aa7.43□□□□□ -1.22
RFC1-211ENST00000509084 LINC00612Q8N6U2 182 aa7.43□□□□□ -1.22
RFC1-211ENST00000509084 TRAPPC1Q9Y5R8 145 aa7.43□□□□□ -1.22
RFC1-211ENST00000509084 TRGV2A0A075B6R0 118 aa7.42□□□□□ -1.22
RFC1-211ENST00000509084 GAGE12BA1L429 117 aa7.42□□□□□ -1.22
RFC1-211ENST00000509084 RS1O15537 224 aa7.42□□□□□ -1.22
RFC1-211ENST00000509084 GAGE7O76087 117 aa7.42□□□□□ -1.22
RFC1-211ENST00000509084 APCSP02743 223 aa7.42□□□□□ -1.22
RFC1-211ENST00000509084 GAGE12FP0CL80 117 aa7.42□□□□□ -1.22
RFC1-211ENST00000509084 GAGE12GP0CL81 117 aa7.42□□□□□ -1.22
RFC1-211ENST00000509084 GAGE12IP0CL82 117 aa7.42□□□□□ -1.22
RFC1-211ENST00000509084 EVI2AP22794 236 aa7.42□□□□□ -1.22
RFC1-211ENST00000509084 FAM222AQ5U5X8 452 aa7.42□□□□□ -1.22
RFC1-211ENST00000509084 ZFP2Q6ZN57 461 aa7.42□□□□□ -1.22
RFC1-211ENST00000509084 C14orf178Q8N769 122 aaPredicted RBP7.42□□□□□ -1.22
RFC1-211ENST00000509084 OR4C5Q8NGB2 326 aa7.42□□□□□ -1.22
RFC1-211ENST00000509084 MRPL18Q9H0U6 180 aaKnown RBP7.42□□□□□ -1.22
RFC1-211ENST00000509084 DKK2Q9UBU2 259 aa7.42□□□□□ -1.22
RFC1-211ENST00000509084 MGAM2Q2M2H8 2515 aa7.41□□□□□ -1.22
RFC1-211ENST00000509084 PPBPP02775 128 aa7.41□□□□□ -1.22
RFC1-211ENST00000509084 FABP9Q0Z7S8 132 aa7.41□□□□□ -1.22
RFC1-211ENST00000509084 FAM74A4Q5TZK3 123 aa7.41□□□□□ -1.22
RFC1-211ENST00000509084 CFAP126Q5VTH2 177 aa7.41□□□□□ -1.22
RFC1-211ENST00000509084 AMN1Q8IY45 258 aa7.41□□□□□ -1.22
RFC1-211ENST00000509084 MRAP2Q96G30 205 aa7.41□□□□□ -1.22
RFC1-211ENST00000509084 KIF25-AS1Q9Y6Z4 181 aa7.41□□□□□ -1.22
RFC1-211ENST00000509084 MUC4Q99102 2169 aa7.41□□□□□ -1.22
RFC1-211ENST00000509084 A0A087WWL8 130 aa7.4□□□□□ -1.22
RFC1-211ENST00000509084 H7C1H1 209 aa7.4□□□□□ -1.22
RFC1-211ENST00000509084 PPP1R17O96001 155 aa7.4□□□□□ -1.22
RFC1-211ENST00000509084 CRYGDP07320 174 aa7.4□□□□□ -1.22
RFC1-211ENST00000509084 MGPP08493 103 aa7.4□□□□□ -1.22
RFC1-211ENST00000509084 RAB4AP20338 218 aa7.4□□□□□ -1.22
RFC1-211ENST00000509084 DAD1P61803 113 aa7.4□□□□□ -1.22
RFC1-211ENST00000509084 SLAQ13239 276 aa7.4□□□□□ -1.22
RFC1-211ENST00000509084 ZNF56Q15929 161 aa7.4□□□□□ -1.22
RFC1-211ENST00000509084 POM121L12Q8N7R1 296 aa7.4□□□□□ -1.22
RFC1-211ENST00000509084 F5H697 171 aa7.39□□□□□ -1.23
RFC1-211ENST00000509084 DEFB4AO15263 64 aa7.39□□□□□ -1.23
RFC1-211ENST00000509084 TRGC2P03986 189 aa7.39□□□□□ -1.23
RFC1-211ENST00000509084 ATP5G1P05496 136 aa7.39□□□□□ -1.23
RFC1-211ENST00000509084 DEFB130BP0DP73 79 aa7.39□□□□□ -1.23
RFC1-211ENST00000509084 DEFB130AP0DP74 79 aa7.39□□□□□ -1.23
RFC1-211ENST00000509084 MRPL51Q4U2R6 128 aaKnown RBP7.39□□□□□ -1.23
RFC1-211ENST00000509084 ORMDL3Q8N138 153 aa7.39□□□□□ -1.23
RFC1-211ENST00000509084 RNF185Q96GF1 192 aa7.39□□□□□ -1.23
RFC1-211ENST00000509084 JPT2Q9H910 190 aa7.39□□□□□ -1.23
RFC1-211ENST00000509084 EDA2RQ9HAV5 297 aa7.39□□□□□ -1.23
RFC1-211ENST00000509084 LAMTOR2Q9Y2Q5 125 aa7.39□□□□□ -1.23
RFC1-211ENST00000509084 A0A0J9YWU9 116 aa7.38□□□□□ -1.23
RFC1-211ENST00000509084 C1orf196B1AJZ1 125 aa7.38□□□□□ -1.23
RFC1-211ENST00000509084 PHOX2AO14813 284 aa7.38□□□□□ -1.23
RFC1-211ENST00000509084 CKS2P33552 79 aa7.38□□□□□ -1.23
RFC1-211ENST00000509084 UFSP1Q6NVU6 142 aa7.38□□□□□ -1.23
RFC1-211ENST00000509084 SAMD10Q9BYL1 202 aa7.38□□□□□ -1.23
RFC1-211ENST00000509084 CELA1Q9UNI1 258 aa7.38□□□□□ -1.23
RFC1-211ENST00000509084 TRGV4A0A0C4DH28 118 aa7.37□□□□□ -1.23
RFC1-211ENST00000509084 D6R8Y8 96 aa7.37□□□□□ -1.23
RFC1-211ENST00000509084 IGHV3-53P01767 116 aa7.37□□□□□ -1.23
RFC1-211ENST00000509084 LINC00315P59091 139 aa7.37□□□□□ -1.23
RFC1-211ENST00000509084 RAB5BP61020 215 aa7.37□□□□□ -1.23
RFC1-211ENST00000509084 SUMO4Q6EEV6 95 aa7.37□□□□□ -1.23
RFC1-211ENST00000509084 C11orf45Q8TAV5 145 aa7.37□□□□□ -1.23
RFC1-211ENST00000509084 ZNF479Q96JC4 524 aa7.37□□□□□ -1.23
RFC1-211ENST00000509084 U3KQK5 164 aa7.37□□□□□ -1.23
RFC1-211ENST00000509084 NOTCH1P46531 2555 aa7.36□□□□□ -1.23
RFC1-211ENST00000509084 TRBV10-1A0A0K0K1A3 114 aa7.36□□□□□ -1.23
RFC1-211ENST00000509084 TRBV6-4A0A1B0GX49 114 aa7.36□□□□□ -1.23
RFC1-211ENST00000509084 GATA1P15976 413 aaPredicted RBP7.36□□□□□ -1.23
RFC1-211ENST00000509084 RHOHQ15669 191 aa7.36□□□□□ -1.23
RFC1-211ENST00000509084 PRELID3AQ96N28 172 aa7.36□□□□□ -1.23
RFC1-211ENST00000509084 IGHV3-73A0A0B4J1V6 119 aa7.35□□□□□ -1.23
RFC1-211ENST00000509084 K7EQD1 137 aa7.35□□□□□ -1.23
RFC1-211ENST00000509084 M0QY20 66 aa7.35□□□□□ -1.23
RFC1-211ENST00000509084 SRIP30626 198 aa7.35□□□□□ -1.23
RFC1-211ENST00000509084 KIAA1644Q3SXP7 199 aa7.35□□□□□ -1.23
RFC1-211ENST00000509084 DNAJC30Q96LL9 226 aa7.35□□□□□ -1.23
RFC1-211ENST00000509084 PRADC1Q9BSG0 188 aa7.35□□□□□ -1.23
RFC1-211ENST00000509084 ALKBH7Q9BT30 221 aaPredicted RBP7.35□□□□□ -1.23
RFC1-211ENST00000509084 PRO0255Q9UI72 69 aa7.35□□□□□ -1.23
RFC1-211ENST00000509084 TRAV26-2A0A0B4J265 109 aa7.34□□□□□ -1.23
RFC1-211ENST00000509084 TRBV6-5A0A0K0K1A5 114 aa7.34□□□□□ -1.23
RFC1-211ENST00000509084 TNFRSF6BO95407 300 aa7.34□□□□□ -1.23
RFC1-211ENST00000509084 NCR2O95944 276 aa7.34□□□□□ -1.23
RFC1-211ENST00000509084 FHL2Q14192 279 aa7.34□□□□□ -1.23
RFC1-211ENST00000509084 C12orf74Q32Q52 190 aa7.34□□□□□ -1.23
RFC1-211ENST00000509084 OR10J3Q5JRS4 329 aa7.34□□□□□ -1.23
RFC1-211ENST00000509084 C20orf78Q9BR46 151 aa7.34□□□□□ -1.23
RFC1-211ENST00000509084 MAP1LC3AQ9H492 121 aa7.34□□□□□ -1.23
RFC1-211ENST00000509084 NIT2Q9NQR4 276 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms